public override void Encode(
DicomPixelData oldPixelData,
DicomPixelData newPixelData,
DicomCodecParams parameters)
{
var pixelCount = oldPixelData.Width * oldPixelData.Height;
var numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (var frame = 0; frame < oldPixelData.NumberOfFrames; frame++)
{
var frameData = oldPixelData.GetFrame(frame);
var frameArray = frameData.Data;
using (var encoder = new RLEEncoder())
{
for (var s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
var sample = s / oldPixelData.BytesAllocated;
var sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == PlanarConfiguration.Interleaved)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
pos += oldPixelData.BytesAllocated - sabyte - 1;
for (var p = 0; p < pixelCount; p++)
{
if (pos >= frameArray.Length)
{
throw new InvalidOperationException("Read position is past end of frame buffer");
}
encoder.Encode(frameArray[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
var data = encoder.GetBuffer();
newPixelData.AddFrame(data);
}
}
}
public override void Encode(
DicomPixelData oldPixelData,
DicomPixelData newPixelData,
DicomCodecParams parameters)
{
var pixelCount = oldPixelData.Width * oldPixelData.Height;
var numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (var frame = 0; frame < oldPixelData.NumberOfFrames; frame++)
{
var frameData = oldPixelData.GetFrame(frame);
var frameArray = frameData.Data;
using (var encoder = new RLEEncoder())
{
for (var s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
var sample = s / oldPixelData.BytesAllocated;
var sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == PlanarConfiguration.Interleaved)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
pos += oldPixelData.BytesAllocated - sabyte - 1;
for (var p = 0; p < pixelCount; p++)
{
if (pos >= frameArray.Length)
{
throw new InvalidOperationException("Read position is past end of frame buffer");
}
encoder.Encode(frameArray[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
var data = encoder.GetBuffer();
newPixelData.AddFrame(data);
}
}
}
public void Encode(DcmDataset dataset, DcmPixelData oldPixelData, DcmPixelData newPixelData, DcmCodecParameters parameters)
{
DcmRleCodecParameters rleParams = parameters as DcmRleCodecParameters;
if (rleParams == null)
rleParams = GetDefaultParameters() as DcmRleCodecParameters;
int pixelCount = oldPixelData.ImageWidth * oldPixelData.ImageHeight;
int numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (int i = 0; i < oldPixelData.NumberOfFrames; i++)
{
RLEEncoder encoder = new RLEEncoder();
byte[] frameData = oldPixelData.GetFrameDataU8(i);
for (int s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
int sample = s / oldPixelData.BytesAllocated;
int sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == 0)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
if (rleParams.ReverseByteOrder)
pos += sabyte;
else
pos += oldPixelData.BytesAllocated - sabyte - 1;
for (int p = 0; p < pixelCount; p++)
{
if (pos >= frameData.Length)
throw new DicomCodecException("");
encoder.Encode(frameData[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
newPixelData.AddFrame(encoder.GetBuffer());
}
}
public void Encode(DcmDataset dataset, DcmPixelData oldPixelData, DcmPixelData newPixelData, DcmCodecParameters parameters)
{
DcmRleCodecParameters rleParams = parameters as DcmRleCodecParameters;
if (rleParams == null)
{
rleParams = GetDefaultParameters() as DcmRleCodecParameters;
}
int pixelCount = oldPixelData.ImageWidth * oldPixelData.ImageHeight;
int numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (int i = 0; i < oldPixelData.NumberOfFrames; i++)
{
RLEEncoder encoder = new RLEEncoder();
byte[] frameData = oldPixelData.GetFrameDataU8(i);
for (int s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
int sample = s / oldPixelData.BytesAllocated;
int sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == 0)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
if (rleParams.ReverseByteOrder)
{
pos += sabyte;
}
else
{
pos += oldPixelData.BytesAllocated - sabyte - 1;
}
for (int p = 0; p < pixelCount; p++)
{
if (pos >= frameData.Length)
{
throw new DicomCodecException("");
}
encoder.Encode(frameData[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
newPixelData.AddFrame(encoder.GetBuffer());
}
}
public void Encode(DicomUncompressedPixelData oldPixelData, DicomCompressedPixelData newPixelData, DicomCodecParameters parameters)
{
DicomRleCodecParameters rleParams = parameters as DicomRleCodecParameters;
if (rleParams == null)
throw new DicomCodecException("Unexpected RLE Codec parameters");
// Convert to RGB
if (oldPixelData.HasPaletteColorLut && parameters.ConvertPaletteToRGB)
{
oldPixelData.ConvertPaletteColorToRgb();
newPixelData.HasPaletteColorLut = false;
newPixelData.SamplesPerPixel = oldPixelData.SamplesPerPixel;
newPixelData.PlanarConfiguration = oldPixelData.PlanarConfiguration;
newPixelData.PhotometricInterpretation = oldPixelData.PhotometricInterpretation;
}
int pixelCount = oldPixelData.ImageWidth * oldPixelData.ImageHeight;
int numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (int i = 0; i < oldPixelData.NumberOfFrames; i++)
{
RLEEncoder encoder = new RLEEncoder();
byte[] frameData = oldPixelData.GetFrame(i);
for (int s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
int sample = s / oldPixelData.BytesAllocated;
int sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == 0)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
if (rleParams.ReverseByteOrder)
pos += sabyte;
else
pos += oldPixelData.BytesAllocated - sabyte - 1;
for (int p = 0; p < pixelCount; p++)
{
if (pos >= frameData.Length)
throw new DicomCodecException("");
encoder.Encode(frameData[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
newPixelData.AddFrameFragment(encoder.GetBuffer());
}
}
public void Encode(DicomUncompressedPixelData oldPixelData, DicomCompressedPixelData newPixelData, DicomCodecParameters parameters)
{
DicomRleCodecParameters rleParams = parameters as DicomRleCodecParameters ?? new DicomRleCodecParameters();
// Convert to RGB
if (oldPixelData.HasPaletteColorLut && parameters.ConvertPaletteToRGB)
{
oldPixelData.ConvertPaletteColorToRgb();
newPixelData.HasPaletteColorLut = false;
newPixelData.SamplesPerPixel = oldPixelData.SamplesPerPixel;
newPixelData.PlanarConfiguration = oldPixelData.PlanarConfiguration;
newPixelData.PhotometricInterpretation = oldPixelData.PhotometricInterpretation;
}
int pixelCount = oldPixelData.ImageWidth * oldPixelData.ImageHeight;
int numberOfSegments = oldPixelData.BytesAllocated * oldPixelData.SamplesPerPixel;
for (int i = 0; i < oldPixelData.NumberOfFrames; i++)
{
RLEEncoder encoder = new RLEEncoder();
byte[] frameData = oldPixelData.GetFrame(i);
for (int s = 0; s < numberOfSegments; s++)
{
encoder.NextSegment();
int sample = s / oldPixelData.BytesAllocated;
int sabyte = s % oldPixelData.BytesAllocated;
int pos;
int offset;
if (newPixelData.PlanarConfiguration == 0)
{
pos = sample * oldPixelData.BytesAllocated;
offset = numberOfSegments;
}
else
{
pos = sample * oldPixelData.BytesAllocated * pixelCount;
offset = oldPixelData.BytesAllocated;
}
if (rleParams.ReverseByteOrder)
{
pos += sabyte;
}
else
{
pos += oldPixelData.BytesAllocated - sabyte - 1;
}
for (int p = 0; p < pixelCount; p++)
{
if (pos >= frameData.Length)
{
throw new DicomCodecException("");
}
encoder.Encode(frameData[pos]);
pos += offset;
}
encoder.Flush();
}
encoder.MakeEvenLength();
newPixelData.AddFrameFragment(encoder.GetBuffer());
}
}