public static void CreateIrtDb(string path, ProcessedIrtAverages processed, DbIrtPeptide[] standardPeptides, bool recalibrate, IrtRegressionType regressionType, IProgressMonitor monitor)
{
DbIrtPeptide[] newStandards = null;
if (recalibrate)
{
monitor.UpdateProgress(new ProgressStatus().ChangeSegments(0, 2));
newStandards = processed.RecalibrateStandards(standardPeptides).ToArray();
processed = RCalcIrt.ProcessRetentionTimes(monitor,
processed.ProviderData.Select(data => data.RetentionTimeProvider).ToArray(),
newStandards.ToArray(), new DbIrtPeptide[0], regressionType);
}
var irtDb = IrtDb.CreateIrtDb(path);
irtDb.AddPeptides(monitor, (newStandards ?? standardPeptides).Concat(processed.DbIrtPeptides).ToList());
}
private bool AddIrts(LibraryManager.BuildState buildState)
{
try
{
Library lib;
ProcessedIrtAverages processed = null;
var initialMessage = Resources.LibraryBuildNotificationHandler_LibraryBuildCompleteCallback_Adding_iRTs_to_library;
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_LibraryBuildCompleteCallback_Adding_iRTs_to_library
})
{
var status = longWait.PerformWork(TopMostApplicationForm, 800, monitor =>
{
var initStatus = new ProgressStatus(initialMessage).ChangeSegments(0, 2);
monitor.UpdateProgress(initStatus);
lib = NotificationContainer.LibraryManager.TryGetLibrary(buildState.LibrarySpec) ??
NotificationContainer.LibraryManager.LoadLibrary(buildState.LibrarySpec, () => new DefaultFileLoadMonitor(monitor));
foreach (var stream in lib.ReadStreams)
{
stream.CloseStream();
}
if (longWait.IsCanceled)
{
return;
}
var irtProviders = lib.RetentionTimeProvidersIrt.ToArray();
if (!irtProviders.Any())
{
irtProviders = lib.RetentionTimeProviders.ToArray();
}
processed = RCalcIrt.ProcessRetentionTimes(monitor, irtProviders, irtProviders.Length,
buildState.IrtStandard.Peptides.ToArray(), new DbIrtPeptide[0]);
});
if (status.IsCanceled)
{
return(false);
}
if (status.IsError)
{
throw status.ErrorException;
}
}
using (var resultsDlg = new AddIrtPeptidesDlg(AddIrtPeptidesLocation.spectral_library, processed))
{
if (resultsDlg.ShowDialog(TopMostApplicationForm) != DialogResult.OK)
{
return(false);
}
}
var recalibrate = false;
if (processed.CanRecalibrateStandards(buildState.IrtStandard.Peptides))
{
using (var dlg = new MultiButtonMsgDlg(
TextUtil.LineSeparate(Resources.LibraryGridViewDriver_AddToLibrary_Do_you_want_to_recalibrate_the_iRT_standard_values_relative_to_the_peptides_being_added_,
Resources.LibraryGridViewDriver_AddToLibrary_This_can_improve_retention_time_alignment_under_stable_chromatographic_conditions_),
MultiButtonMsgDlg.BUTTON_YES, MultiButtonMsgDlg.BUTTON_NO, false))
{
if (dlg.ShowDialog(TopMostApplicationForm) == DialogResult.Yes)
{
recalibrate = true;
}
}
}
var processedDbIrtPeptides = processed.DbIrtPeptides.ToArray();
if (!processedDbIrtPeptides.Any())
{
return(false);
}
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_LibraryBuildCompleteCallback_Adding_iRTs_to_library
})
{
ImmutableList <DbIrtPeptide> newStandards = null;
var status = longWait.PerformWork(TopMostApplicationForm, 800, monitor =>
{
if (recalibrate)
{
monitor.UpdateProgress(new ProgressStatus().ChangeSegments(0, 2));
newStandards = ImmutableList.ValueOf(processed.RecalibrateStandards(buildState.IrtStandard.Peptides));
processed = RCalcIrt.ProcessRetentionTimes(
monitor, processed.ProviderData.Select(data => data.Value.RetentionTimeProvider),
processed.ProviderData.Count, newStandards.ToArray(), new DbIrtPeptide[0]);
}
var irtDb = IrtDb.CreateIrtDb(buildState.LibrarySpec.FilePath);
irtDb.AddPeptides(monitor, (newStandards ?? buildState.IrtStandard.Peptides).Concat(processedDbIrtPeptides).ToList());
});
if (status.IsError)
{
throw status.ErrorException;
}
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(TopMostApplicationForm,
TextUtil.LineSeparate(Resources.LibraryBuildNotificationHandler_LibraryBuildCompleteCallback_An_error_occurred_trying_to_add_iRTs_to_the_library_, x.Message), x);
return(false);
}
return(true);
}
private bool AddIrtLibraryTable(string path, IrtStandard standard)
{
if (!ImportPeptideSearch.HasDocLib || !ImportPeptideSearch.DocLib.IsLoaded)
{
return(false);
}
var lib = ImportPeptideSearch.DocLib;
ProcessedIrtAverages processed = null;
using (var longWait = new LongWaitDlg
{
Text = Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_Processing_Retention_Times
})
{
try
{
var status = longWait.PerformWork(WizardForm, 800, monitor =>
{
var irtProviders = lib.RetentionTimeProvidersIrt.ToArray();
if (!irtProviders.Any())
{
irtProviders = lib.RetentionTimeProviders.ToArray();
}
processed = RCalcIrt.ProcessRetentionTimes(monitor, irtProviders, irtProviders.Length, standard.Peptides.ToArray(), new DbIrtPeptide[0]);
});
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(WizardForm,
TextUtil.LineSeparate(Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_An_error_occurred_while_processing_retention_times_, x.Message), x);
return(false);
}
}
using (var resultsDlg = new AddIrtPeptidesDlg(AddIrtPeptidesLocation.spectral_library, processed))
{
if (resultsDlg.ShowDialog(this) != DialogResult.OK)
{
return(false);
}
}
var recalibrate = false;
if (processed.CanRecalibrateStandards(standard.Peptides))
{
using (var dlg = new MultiButtonMsgDlg(
TextUtil.LineSeparate(Resources.LibraryGridViewDriver_AddToLibrary_Do_you_want_to_recalibrate_the_iRT_standard_values_relative_to_the_peptides_being_added_,
Resources.LibraryGridViewDriver_AddToLibrary_This_can_improve_retention_time_alignment_under_stable_chromatographic_conditions_),
MultiButtonMsgDlg.BUTTON_YES, MultiButtonMsgDlg.BUTTON_NO, false))
{
if (dlg.ShowDialog(WizardForm) == DialogResult.Yes)
{
recalibrate = true;
}
}
}
using (var longWait = new LongWaitDlg
{
Text = Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_Adding_iRTs_to_Library
})
{
try
{
ImmutableList <DbIrtPeptide> newStandards = null;
var status = longWait.PerformWork(WizardForm, 800, monitor =>
{
if (recalibrate)
{
monitor.UpdateProgress(new ProgressStatus().ChangeSegments(0, 2));
newStandards = ImmutableList.ValueOf(processed.RecalibrateStandards(standard.Peptides));
processed = RCalcIrt.ProcessRetentionTimes(
monitor, processed.ProviderData.Select(data => data.Value.RetentionTimeProvider),
processed.ProviderData.Count, newStandards.ToArray(), new DbIrtPeptide[0]);
}
var irtDb = IrtDb.CreateIrtDb(path);
irtDb.AddPeptides(monitor, (newStandards ?? standard.Peptides).Concat(processed.DbIrtPeptides).ToList());
});
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(WizardForm,
TextUtil.LineSeparate(Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_An_error_occurred_trying_to_add_iRTs_to_the_library_, x.Message), x);
return(false);
}
}
return(true);
}
public static bool AddIrts(Library lib, LibrarySpec libSpec, IrtStandard standard, Control parent, bool useTopMostForm = false)
{
if (lib == null || !lib.IsLoaded || standard == null || standard.Name.Equals(IrtStandard.EMPTY.Name))
{
return(false);
}
Control GetParent()
{
return(useTopMostForm ? FormUtil.FindTopLevelOpenForm(f => f is BuildLibraryNotification) ?? parent : parent);
}
IRetentionTimeProvider[] irtProviders = null;
var cirtPeptides = new DbIrtPeptide[0];
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Loading_retention_time_providers
})
{
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
monitor.UpdateProgress(new ProgressStatus().ChangePercentComplete(-1));
irtProviders = lib.RetentionTimeProvidersIrt.ToArray();
if (!irtProviders.Any())
{
irtProviders = lib.RetentionTimeProviders.ToArray();
}
if (ReferenceEquals(standard, IrtStandard.CIRT_SHORT))
{
var libPeptides = irtProviders.SelectMany(provider => provider.PeptideRetentionTimes).Select(rt => rt.PeptideSequence).ToHashSet();
cirtPeptides = IrtStandard.CIRT.Peptides.Where(pep => libPeptides.Contains(pep.ModifiedTarget)).ToArray();
}
});
if (status.IsCanceled)
{
return(false);
}
if (status.IsError)
{
throw status.ErrorException;
}
}
int?numCirt = null;
if (cirtPeptides.Length >= RCalcIrt.MIN_PEPTIDES_COUNT)
{
using (var dlg = new AddIrtStandardsDlg(cirtPeptides.Length,
string.Format(
Resources.LibraryBuildNotificationHandler_AddIrts__0__distinct_CiRT_peptides_were_found__How_many_would_you_like_to_use_as_iRT_standards_,
cirtPeptides.Length)))
{
if (dlg.ShowDialog(GetParent()) != DialogResult.OK)
{
return(false);
}
numCirt = dlg.StandardCount;
}
}
var standardPeptides = standard.Peptides.ToArray();
ProcessedIrtAverages processed = null;
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Processing_retention_times
})
{
try
{
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
processed = !numCirt.HasValue
? RCalcIrt.ProcessRetentionTimes(monitor, irtProviders, standardPeptides, new DbIrtPeptide[0])
: RCalcIrt.ProcessRetentionTimesCirt(monitor, irtProviders, cirtPeptides, numCirt.Value, out standardPeptides);
});
if (status.IsCanceled)
{
return(false);
}
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(GetParent(),
TextUtil.LineSeparate(
Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_An_error_occurred_while_processing_retention_times_,
x.Message), x);
return(false);
}
}
using (var resultsDlg = new AddIrtPeptidesDlg(AddIrtPeptidesLocation.spectral_library, processed))
{
if (resultsDlg.ShowDialog(GetParent()) != DialogResult.OK)
{
return(false);
}
}
var recalibrate = false;
if (processed.CanRecalibrateStandards(standardPeptides))
{
using (var dlg = new MultiButtonMsgDlg(
TextUtil.LineSeparate(Resources.LibraryGridViewDriver_AddToLibrary_Do_you_want_to_recalibrate_the_iRT_standard_values_relative_to_the_peptides_being_added_,
Resources.LibraryGridViewDriver_AddToLibrary_This_can_improve_retention_time_alignment_under_stable_chromatographic_conditions_),
MultiButtonMsgDlg.BUTTON_YES, MultiButtonMsgDlg.BUTTON_NO, false))
{
recalibrate = dlg.ShowDialog(GetParent()) == DialogResult.Yes;
}
}
var processedDbIrtPeptides = processed.DbIrtPeptides.ToArray();
if (!processedDbIrtPeptides.Any())
{
return(false);
}
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Adding_iRTs_to_library
})
{
try
{
DbIrtPeptide[] newStandards = null;
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
if (recalibrate)
{
monitor.UpdateProgress(new ProgressStatus().ChangeSegments(0, 2));
newStandards = processed.RecalibrateStandards(standardPeptides).ToArray();
processed = RCalcIrt.ProcessRetentionTimes(monitor,
processed.ProviderData.Select(data => data.RetentionTimeProvider).ToArray(),
newStandards.ToArray(), new DbIrtPeptide[0]);
}
var irtDb = IrtDb.CreateIrtDb(libSpec.FilePath);
irtDb.AddPeptides(monitor, (newStandards ?? standardPeptides).Concat(processed.DbIrtPeptides).ToList());
});
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(GetParent(),
TextUtil.LineSeparate(
Resources.LibraryBuildNotificationHandler_AddIrts_An_error_occurred_trying_to_add_iRTs_to_the_library_,
x.Message), x);
return(false);
}
}
return(true);
}
public AddIrtPeptidesDlg(
AddIrtPeptidesLocation location,
ProcessedIrtAverages processed,
IReadOnlyCollection <Target> existingPeptides,
IReadOnlyCollection <Target> overwritePeptides,
IReadOnlyCollection <Target> keepPeptides)
{
InitializeComponent();
Icon = Resources.Skyline;
_regressionGraphData = new Dictionary <DataGridViewRow, RegressionGraphData[]>();
var successStyle = new DataGridViewCellStyle {
BackColor = Color.LightGreen
};
var failStyle = new DataGridViewCellStyle {
BackColor = Color.LightCoral
};
foreach (var kvp in processed.ProviderData)
{
var file = kvp.Key;
var data = kvp.Value;
var graphData = new RegressionGraphData
{
Title = file,
LabelX = Resources.AddIrtsResultsDlg_dataGridView_CellContentClick_Measured,
LabelY = Resources.AddIrtPeptidesDlg_dataGridView_CellContentClick_iRT,
XValues = data.Times,
YValues = data.Irts,
Tooltips = Enumerable.Range(0, data.Peptides.Length).ToDictionary(i => i, i => data.Peptides[i].ToString()),
MissingIndices = data.MissingIndices,
OutlierIndices = data.OutlierIndices,
RegressionLine = data.RegressionRefined,
RegressionLineCurrent = data.Regression,
RegressionName = data.RegressionSuccess
? Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_Regression_Refined
: Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_Regression_Attempted,
ShowCurrentR = true,
MinR = RCalcIrt.MIN_IRT_TO_TIME_CORRELATION,
MinPoints = data.MinPoints
};
string filename;
try
{
filename = Path.GetFileName(file);
}
catch (Exception)
{
filename = file;
}
dataGridView.Rows.Add(
filename,
graphData.RegularPoints.Count,
data.RegressionRefined != null ? data.RegressionRefined.Slope.ToString("F04") : string.Empty, // Not L10N
data.RegressionRefined != null ? data.RegressionRefined.Intercept.ToString("F04") : string.Empty, // Not L10N
graphData.R.ToString("F03"), // Not L10N
data.RegressionSuccess ? Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_Success : Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_Failed);
var lastRow = dataGridView.Rows[dataGridView.RowCount - 1];
lastRow.DefaultCellStyle = data.RegressionSuccess ? successStyle : failStyle;
lastRow.Tag = data;
_regressionGraphData[lastRow] = new[] { graphData };
}
PeptidesCount = processed.DbIrtPeptides.Count() - existingPeptides.Count - overwritePeptides.Count - keepPeptides.Count;
RunsConvertedCount = processed.ProviderData.Count(data => data.Value.RegressionSuccess);
RunsFailedCount = processed.ProviderData.Count - RunsConvertedCount;
string locationStr;
switch (location)
{
default:
locationStr = Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_iRT_database;
break;
case AddIrtPeptidesLocation.spectral_library:
locationStr = Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_spectral_library;
break;
}
if (PeptidesCount == 0)
{
labelPeptidesAdded.Text = string.Format(Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_No_new_peptides_will_be_added_to_the__0__, locationStr);
}
else if (PeptidesCount == 1)
{
labelPeptidesAdded.Text = string.Format(Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_1_new_peptide_will_be_added_to_the__0__, locationStr);
}
else
{
labelPeptidesAdded.Text = string.Format(labelPeptidesAdded.Text, PeptidesCount, locationStr);
}
if (RunsConvertedCount == 0)
{
labelRunsConverted.Visible = false;
}
else
{
labelRunsConverted.Text = RunsConvertedCount > 1
? string.Format(labelRunsConverted.Text, RunsConvertedCount)
: Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_1_run_was_successfully_converted;
}
if (RunsFailedCount == 0)
{
labelRunsFailed.Visible = false;
}
else
{
labelRunsFailed.Text = RunsFailedCount > 1
? string.Format(labelRunsFailed.Text, RunsFailedCount)
: Resources.AddIrtPeptidesDlg_AddIrtPeptidesDlg_1_run_was_not_converted_due_to_insufficient_correlation;
}
listExisting.Items.AddRange(existingPeptides.Cast <object>().ToArray());
listOverwrite.Items.AddRange(overwritePeptides.Cast <object>().ToArray());
listKeep.Items.AddRange(keepPeptides.Cast <object>().ToArray());
labelExisting.Text = string.Format(labelExisting.Text, listExisting.Items.Count);
labelOverwrite.Text = string.Format(labelOverwrite.Text, listOverwrite.Items.Count);
labelKeep.Text = string.Format(labelKeep.Text, listKeep.Items.Count);
panelExisting.Anchor &= ~AnchorStyles.Bottom;
if (!processed.ProviderData.Any())
{
dataGridView.Visible = false;
panelOverwrite.Top -= dataGridView.Height;
panelKeep.Top -= dataGridView.Height;
panelExisting.Top -= dataGridView.Height;
Height -= dataGridView.Height;
}
if (listOverwrite.Items.Count == 0)
{
panelOverwrite.Visible = false;
panelKeep.Top -= panelOverwrite.Height;
panelExisting.Top -= panelOverwrite.Height;
Height -= panelOverwrite.Height;
}
if (listKeep.Items.Count == 0)
{
panelKeep.Visible = false;
panelExisting.Top -= panelKeep.Height;
Height -= panelKeep.Height;
}
panelExisting.Anchor |= AnchorStyles.Bottom;
if (listExisting.Items.Count == 0)
{
panelExisting.Visible = false;
Height -= panelExisting.Height;
}
if (!listOverwrite.Items.Any() && !listKeep.Items.Any() && !listExisting.Items.Any())
{
if (processed.ProviderData.Any())
{
dataGridView.Anchor |= AnchorStyles.Bottom;
}
else
{
FormBorderStyle = FormBorderStyle.FixedDialog;
}
}
}
public AddIrtPeptidesDlg(AddIrtPeptidesLocation location, ProcessedIrtAverages processed)
: this(location, processed, new Target[] { }, new Target[] { }, new Target[] { })
{
}
public static bool AddIrts(IrtRegressionType regressionType, Library lib, LibrarySpec libSpec, IrtStandard standard, Control parent, bool useTopMostForm)
{
if (lib == null || !lib.IsLoaded || standard == null || standard.Name.Equals(IrtStandard.EMPTY.Name))
{
return(false);
}
Control GetParent()
{
return(useTopMostForm ? FormUtil.FindTopLevelOpenForm(f => f is BuildLibraryNotification) ?? parent : parent);
}
IRetentionTimeProvider[] irtProviders = null;
var isAuto = ReferenceEquals(standard, IrtStandard.AUTO);
List <IrtStandard> autoStandards = null;
var cirtPeptides = new DbIrtPeptide[0];
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Loading_retention_time_providers
})
{
var standard1 = standard;
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
ImportPeptideSearch.GetLibIrtProviders(lib, standard1, monitor, out irtProviders, out autoStandards, out cirtPeptides);
});
if (status.IsCanceled)
{
return(false);
}
if (status.IsError)
{
throw status.ErrorException;
}
}
int?numCirt = null;
if (cirtPeptides.Length >= RCalcIrt.MIN_PEPTIDES_COUNT)
{
using (var dlg = new AddIrtStandardsDlg(cirtPeptides.Length,
string.Format(
Resources.LibraryBuildNotificationHandler_AddIrts__0__distinct_CiRT_peptides_were_found__How_many_would_you_like_to_use_as_iRT_standards_,
cirtPeptides.Length)))
{
if (dlg.ShowDialog(GetParent()) != DialogResult.OK)
{
return(false);
}
numCirt = dlg.StandardCount;
}
}
else if (isAuto)
{
switch (autoStandards.Count)
{
case 0:
standard = new IrtStandard(XmlNamedElement.NAME_INTERNAL, null, null, IrtPeptidePicker.Pick(irtProviders, 10));
break;
case 1:
standard = autoStandards[0];
break;
default:
using (var selectIrtStandardDlg = new SelectIrtStandardDlg(autoStandards))
{
if (selectIrtStandardDlg.ShowDialog(GetParent()) != DialogResult.OK)
{
return(false);
}
standard = selectIrtStandardDlg.Selected;
}
break;
}
}
var standardPeptides = standard.Peptides.ToArray();
ProcessedIrtAverages processed = null;
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Processing_retention_times
})
{
try
{
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
processed = ImportPeptideSearch.ProcessRetentionTimes(numCirt, irtProviders, standardPeptides, cirtPeptides, regressionType, monitor, out var newStandardPeptides);
if (newStandardPeptides != null)
{
standardPeptides = newStandardPeptides;
}
});
if (status.IsCanceled)
{
return(false);
}
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(GetParent(),
TextUtil.LineSeparate(
Resources.BuildPeptideSearchLibraryControl_AddIrtLibraryTable_An_error_occurred_while_processing_retention_times_,
x.Message), x);
return(false);
}
}
using (var resultsDlg = new AddIrtPeptidesDlg(AddIrtPeptidesLocation.spectral_library, processed))
{
if (resultsDlg.ShowDialog(GetParent()) != DialogResult.OK)
{
return(false);
}
}
var recalibrate = false;
if (processed.CanRecalibrateStandards(standardPeptides))
{
using (var dlg = new MultiButtonMsgDlg(
TextUtil.LineSeparate(Resources.LibraryGridViewDriver_AddToLibrary_Do_you_want_to_recalibrate_the_iRT_standard_values_relative_to_the_peptides_being_added_,
Resources.LibraryGridViewDriver_AddToLibrary_This_can_improve_retention_time_alignment_under_stable_chromatographic_conditions_),
MultiButtonMsgDlg.BUTTON_YES, MultiButtonMsgDlg.BUTTON_NO, false))
{
recalibrate = dlg.ShowDialog(GetParent()) == DialogResult.Yes;
}
}
if (!processed.DbIrtPeptides.Any())
{
return(false);
}
using (var longWait = new LongWaitDlg {
Text = Resources.LibraryBuildNotificationHandler_AddIrts_Adding_iRTs_to_library
})
{
try
{
var status = longWait.PerformWork(GetParent(), 800, monitor =>
{
ImportPeptideSearch.CreateIrtDb(libSpec.FilePath, processed, standardPeptides, recalibrate, regressionType, monitor);
});
if (status.IsError)
{
throw status.ErrorException;
}
}
catch (Exception x)
{
MessageDlg.ShowWithException(GetParent(),
TextUtil.LineSeparate(
Resources.LibraryBuildNotificationHandler_AddIrts_An_error_occurred_trying_to_add_iRTs_to_the_library_,
x.Message), x);
return(false);
}
}
return(true);
}
