private void PreprocessDuplicate(DicomFile duplicateDicomFile, ProcessDuplicateAction action)
{
_patientNameRules.Apply(duplicateDicomFile);
if (action == ProcessDuplicateAction.OverwriteUseExisting)
{
var sq = new OriginalAttributesSequence
{
ModifiedAttributesSequence = new DicomSequenceItem(),
ModifyingSystem = ProductInformation.Component,
ReasonForTheAttributeModification = "COERCE",
AttributeModificationDatetime = Platform.Time,
SourceOfPreviousValues = duplicateDicomFile.SourceApplicationEntityTitle
};
foreach (BaseImageLevelUpdateCommand command in _duplicateUpdateCommands)
{
if (!command.Apply(duplicateDicomFile, sq))
{
throw new ApplicationException(String.Format("Unable to update the duplicate sop. Command={0}", command));
}
}
var sqAttrib = duplicateDicomFile.DataSet[DicomTags.OriginalAttributesSequence] as DicomAttributeSQ;
if (sqAttrib != null)
{
sqAttrib.AddSequenceItem(sq.DicomSequenceItem);
}
}
}
private void OverwriteExistingInstance(WorkQueueUid uid, ProcessDuplicateAction action)
{
if (ExistsInStudy(uid))
{
// remove the existing image and update the count
RemoveExistingImage(uid);
}
DicomFile duplicateDicomFile = LoadDuplicateDicomFile(uid, false);
PreprocessDuplicate(duplicateDicomFile, action);
AddDuplicateToStudy(duplicateDicomFile, uid, action);
}
private void PreprocessDuplicate(DicomFile duplicateDicomFile, ProcessDuplicateAction action)
{
_patientNameRules.Apply(duplicateDicomFile);
if (action == ProcessDuplicateAction.OverwriteUseExisting)
{
foreach (BaseImageLevelUpdateCommand command in _duplicateUpdateCommands)
{
if (!command.Apply(duplicateDicomFile))
{
throw new ApplicationException(String.Format("Unable to update the duplicate sop. Command={0}", command));
}
}
}
}
protected void OKButton_Click(object sender, ImageClickEventArgs e)
{
try
{
var itemKey = ViewState["QueueItem"] as ServerEntityKey;
var controller = new DuplicateSopEntryController();
ProcessDuplicateAction action = ProcessDuplicateAction.OverwriteAsIs;
if (UseExistingSopRadioButton.Checked)
{
action = ProcessDuplicateAction.OverwriteUseExisting;
}
else if (UseDuplicateRadioButton.Checked)
{
action = ProcessDuplicateAction.OverwriteUseDuplicates;
}
else if (DeleteDuplicateRadioButton.Checked)
{
action = ProcessDuplicateAction.Delete;
}
else if (ReplaceAsIsRadioButton.Checked)
{
action = ProcessDuplicateAction.OverwriteAsIs;
}
controller.Process(itemKey, action);
}
catch (Exception ex)
{
MessageBox.Message = String.Format(ErrorMessages.ActionNotAllowedAtThisTime, ex.Message);
MessageBox.MessageType = MessageBox.MessageTypeEnum.ERROR;
MessageBox.Show();
}
//((Default) Page).UpdateUI();
Close();
}
/// <summary>
/// Inserts work queue entry to process the duplicates.
/// </summary>
/// <param name="entryKey"><see cref="ServerEntityKey"/> of the <see cref="StudyIntegrityQueue"/> entry that has <see cref="StudyIntegrityReasonEnum"/> equal to <see cref="StudyIntegrityReasonEnum.Duplicate"/> </param>
/// <param name="action"></param>
public void Process(ServerEntityKey entryKey, ProcessDuplicateAction action)
{
DuplicateSopReceivedQueue entry = DuplicateSopReceivedQueue.Load(HttpContextData.Current.ReadContext, entryKey);
Platform.CheckTrue(entry.StudyIntegrityReasonEnum == StudyIntegrityReasonEnum.Duplicate, "Invalid type of entry");
IList<StudyIntegrityQueueUid> uids = LoadDuplicateSopUid(entry);
using(IUpdateContext context = PersistentStoreRegistry.GetDefaultStore().OpenUpdateContext(UpdateContextSyncMode.Flush))
{
ProcessDuplicateQueueEntryQueueData data = new ProcessDuplicateQueueEntryQueueData
{
Action = action,
DuplicateSopFolder = entry.GetFolderPath(context),
UserName = ServerHelper.CurrentUserName,
};
LockStudyParameters lockParms = new LockStudyParameters
{
QueueStudyStateEnum = QueueStudyStateEnum.ReconcileScheduled,
StudyStorageKey = entry.StudyStorageKey
};
ILockStudy lockBbroker = context.GetBroker<ILockStudy>();
lockBbroker.Execute(lockParms);
if (!lockParms.Successful)
{
throw new ApplicationException(lockParms.FailureReason);
}
IWorkQueueProcessDuplicateSopBroker broker = context.GetBroker<IWorkQueueProcessDuplicateSopBroker>();
WorkQueueProcessDuplicateSopUpdateColumns columns = new WorkQueueProcessDuplicateSopUpdateColumns
{
Data = XmlUtils.SerializeAsXmlDoc(data),
GroupID = entry.GroupID,
ScheduledTime = Platform.Time,
ExpirationTime =
Platform.Time.Add(TimeSpan.FromMinutes(15)),
ServerPartitionKey = entry.ServerPartitionKey,
WorkQueuePriorityEnum =
WorkQueuePriorityEnum.Medium,
StudyStorageKey = entry.StudyStorageKey,
WorkQueueStatusEnum = WorkQueueStatusEnum.Pending
};
WorkQueueProcessDuplicateSop processDuplicateWorkQueueEntry = broker.Insert(columns);
IWorkQueueUidEntityBroker workQueueUidBroker = context.GetBroker<IWorkQueueUidEntityBroker>();
IStudyIntegrityQueueUidEntityBroker duplicateUidBroke = context.GetBroker<IStudyIntegrityQueueUidEntityBroker>();
foreach (StudyIntegrityQueueUid uid in uids)
{
WorkQueueUidUpdateColumns uidColumns = new WorkQueueUidUpdateColumns
{
Duplicate = true,
Extension = ServerPlatform.DuplicateFileExtension,
SeriesInstanceUid = uid.SeriesInstanceUid,
SopInstanceUid = uid.SopInstanceUid,
RelativePath = uid.RelativePath,
WorkQueueKey = processDuplicateWorkQueueEntry.GetKey()
};
workQueueUidBroker.Insert(uidColumns);
duplicateUidBroke.Delete(uid.GetKey());
}
IDuplicateSopEntryEntityBroker duplicateEntryBroker =
context.GetBroker<IDuplicateSopEntryEntityBroker>();
duplicateEntryBroker.Delete(entry.GetKey());
context.Commit();
}
}
private void AddDuplicateToStudy(DicomFile duplicateDicomFile, WorkQueueUid uid, ProcessDuplicateAction action)
{
var context = new StudyProcessorContext(StorageLocation, WorkQueueItem);
var sopInstanceProcessor = new SopInstanceProcessor(context) { EnforceNameRules = true };
string group = uid.GroupID ?? ServerHelper.GetUidGroup(duplicateDicomFile, ServerPartition, WorkQueueItem.InsertTime);
StudyXml studyXml = StorageLocation.LoadStudyXml();
int originalInstanceCount = studyXml.NumberOfStudyRelatedInstances;
bool compare = action != ProcessDuplicateAction.OverwriteAsIs;
// NOTE: "compare" has no effect for OverwriteUseExisting or OverwriteUseDuplicate
// because in both cases, the study and the duplicates are modified to be the same.
ProcessingResult result = sopInstanceProcessor.ProcessFile(group, duplicateDicomFile, studyXml, compare, true, uid, duplicateDicomFile.Filename, SopInstanceProcessorSopType.UpdatedSop);
if (result.Status == ProcessingStatus.Reconciled)
{
throw new ApplicationException("Unexpected status of Reconciled image in duplicate handling!");
}
Debug.Assert(studyXml.NumberOfStudyRelatedInstances == originalInstanceCount + 1);
Debug.Assert(File.Exists(StorageLocation.GetSopInstancePath(uid.SeriesInstanceUid, uid.SopInstanceUid)));
}
private void PreprocessDuplicate(DicomFile duplicateDicomFile, ProcessDuplicateAction action)
{
_patientNameRules.Apply(duplicateDicomFile);
if (action==ProcessDuplicateAction.OverwriteUseExisting)
{
var sq = new OriginalAttributesSequence
{
ModifiedAttributesSequence = new DicomSequenceItem(),
ModifyingSystem = ProductInformation.Component,
ReasonForTheAttributeModification = "COERCE",
AttributeModificationDatetime = Platform.Time,
SourceOfPreviousValues = duplicateDicomFile.SourceApplicationEntityTitle
};
foreach (BaseImageLevelUpdateCommand command in _duplicateUpdateCommands)
{
if (!command.Apply(duplicateDicomFile, sq))
throw new ApplicationException(String.Format("Unable to update the duplicate sop. Command={0}", command));
}
var sqAttrib = duplicateDicomFile.DataSet[DicomTags.OriginalAttributesSequence] as DicomAttributeSQ;
if (sqAttrib != null)
sqAttrib.AddSequenceItem(sq.DicomSequenceItem);
}
}
private void OverwriteExistingInstance(WorkQueueUid uid, ProcessDuplicateAction action)
{
if (ExistsInStudy(uid))
{
// remove the existing image and update the count
RemoveExistingImage(uid);
}
DicomFile duplicateDicomFile = LoadDuplicateDicomFile(uid, false);
PreprocessDuplicate(duplicateDicomFile, action);
AddDuplicateToStudy(duplicateDicomFile, uid, action);
}
private void PreprocessDuplicate(DicomFile duplicateDicomFile, ProcessDuplicateAction action)
{
_patientNameRules.Apply(duplicateDicomFile);
if (action==ProcessDuplicateAction.OverwriteUseExisting)
{
foreach (BaseImageLevelUpdateCommand command in _duplicateUpdateCommands)
{
if (!command.Apply(duplicateDicomFile))
throw new ApplicationException(String.Format("Unable to update the duplicate sop. Command={0}", command));
}
}
}
/// <summary>
/// Inserts work queue entry to process the duplicates.
/// </summary>
/// <param name="entryKey"><see cref="ServerEntityKey"/> of the <see cref="StudyIntegrityQueue"/> entry that has <see cref="StudyIntegrityReasonEnum"/> equal to <see cref="StudyIntegrityReasonEnum.Duplicate"/> </param>
/// <param name="action"></param>
public void Process(ServerEntityKey entryKey, ProcessDuplicateAction action)
{
DuplicateSopReceivedQueue entry = DuplicateSopReceivedQueue.Load(HttpContextData.Current.ReadContext, entryKey);
Platform.CheckTrue(entry.StudyIntegrityReasonEnum == StudyIntegrityReasonEnum.Duplicate, "Invalid type of entry");
IList <StudyIntegrityQueueUid> uids = LoadDuplicateSopUid(entry);
using (IUpdateContext context = PersistentStoreRegistry.GetDefaultStore().OpenUpdateContext(UpdateContextSyncMode.Flush))
{
ProcessDuplicateQueueEntryQueueData data = new ProcessDuplicateQueueEntryQueueData
{
Action = action,
DuplicateSopFolder = entry.GetFolderPath(context),
UserName = ServerHelper.CurrentUserName,
};
LockStudyParameters lockParms = new LockStudyParameters
{
QueueStudyStateEnum = QueueStudyStateEnum.ReconcileScheduled,
StudyStorageKey = entry.StudyStorageKey
};
ILockStudy lockBbroker = context.GetBroker <ILockStudy>();
lockBbroker.Execute(lockParms);
if (!lockParms.Successful)
{
throw new ApplicationException(lockParms.FailureReason);
}
IWorkQueueProcessDuplicateSopBroker broker = context.GetBroker <IWorkQueueProcessDuplicateSopBroker>();
WorkQueueProcessDuplicateSopUpdateColumns columns = new WorkQueueProcessDuplicateSopUpdateColumns
{
Data = XmlUtils.SerializeAsXmlDoc(data),
GroupID = entry.GroupID,
ScheduledTime = Platform.Time,
ExpirationTime =
Platform.Time.Add(TimeSpan.FromMinutes(15)),
ServerPartitionKey = entry.ServerPartitionKey,
WorkQueuePriorityEnum =
WorkQueuePriorityEnum.Medium,
StudyStorageKey = entry.StudyStorageKey,
WorkQueueStatusEnum = WorkQueueStatusEnum.Pending
};
WorkQueueProcessDuplicateSop processDuplicateWorkQueueEntry = broker.Insert(columns);
IWorkQueueUidEntityBroker workQueueUidBroker = context.GetBroker <IWorkQueueUidEntityBroker>();
IStudyIntegrityQueueUidEntityBroker duplicateUidBroke = context.GetBroker <IStudyIntegrityQueueUidEntityBroker>();
foreach (StudyIntegrityQueueUid uid in uids)
{
WorkQueueUidUpdateColumns uidColumns = new WorkQueueUidUpdateColumns
{
Duplicate = true,
Extension = ServerPlatform.DuplicateFileExtension,
SeriesInstanceUid = uid.SeriesInstanceUid,
SopInstanceUid = uid.SopInstanceUid,
RelativePath = uid.RelativePath,
WorkQueueKey = processDuplicateWorkQueueEntry.GetKey()
};
workQueueUidBroker.Insert(uidColumns);
duplicateUidBroke.Delete(uid.GetKey());
}
IDuplicateSopEntryEntityBroker duplicateEntryBroker =
context.GetBroker <IDuplicateSopEntryEntityBroker>();
duplicateEntryBroker.Delete(entry.GetKey());
context.Commit();
}
}
private void AddDuplicateToStudy(DicomFile duplicateDicomFile, WorkQueueUid uid, ProcessDuplicateAction action)
{
var context = new StudyProcessorContext(StorageLocation, WorkQueueItem);
var sopInstanceProcessor = new SopInstanceProcessor(context)
{
EnforceNameRules = true
};
string group = uid.GroupID ?? ServerHelper.GetUidGroup(duplicateDicomFile, ServerPartition, WorkQueueItem.InsertTime);
StudyXml studyXml = StorageLocation.LoadStudyXml();
int originalInstanceCount = studyXml.NumberOfStudyRelatedInstances;
bool compare = action != ProcessDuplicateAction.OverwriteAsIs;
// NOTE: "compare" has no effect for OverwriteUseExisting or OverwriteUseDuplicate
// because in both cases, the study and the duplicates are modified to be the same.
ProcessingResult result = sopInstanceProcessor.ProcessFile(group, duplicateDicomFile, studyXml, compare, true, uid, duplicateDicomFile.Filename, SopInstanceProcessorSopType.UpdatedSop);
if (result.Status == ProcessingStatus.Reconciled)
{
throw new ApplicationException("Unexpected status of Reconciled image in duplicate handling!");
}
Debug.Assert(studyXml.NumberOfStudyRelatedInstances == originalInstanceCount + 1);
Debug.Assert(File.Exists(StorageLocation.GetSopInstancePath(uid.SeriesInstanceUid, uid.SopInstanceUid)));
}
