public void test2() { string path = @"C:\Users\Rui Zhang\Downloads\Serum_1_C18_03292019_Ali.raw"; ISpectrumReader reader = new ThermoRawSpectrumReader(); reader.Init(path); RidgeLineFinder coeffMatrix = new RidgeLineFinder(1.0, 2, 1, 2); IProcess processer = new PeakPickingCWT(coeffMatrix); //for (int i = reader.GetFirstScan(); i < reader.GetLastScan(); i++) int i = 347; { if (reader.GetMSnOrder(i) < 2) { ISpectrum spectrum = reader.GetSpectrum(i); List <IPeak> peaks = spectrum.GetPeaks(); spectrum = processer.Process(spectrum); IAreaCalculator calculator = new TrapezoidalRule(); IBounder bounder = new PerpendicularDrop(); PeakAreaCalculator areaCalculator = new PeakAreaCalculator(calculator, bounder); areaCalculator.Init(peaks); foreach (IPeak peak in spectrum.GetPeaks()) { Console.WriteLine(peak.GetMZ() + " : " + areaCalculator.Area(peak).ToString()); } } } }
public void test2() { string path = @"C:\Users\Rui Zhang\Downloads\Serum_1_C18_03292019_Ali.raw"; ISpectrumReader reader = new ThermoRawSpectrumReader(); reader.Init(path); RidgeLineFinder coeffMatrix = new RidgeLineFinder(1.0, 2, 1, 2); IProcess processer = new PeakPickingCWT(coeffMatrix); //for (int i = reader.GetFirstScan(); i < reader.GetLastScan(); i++) int i = 342; { if (reader.GetMSnOrder(i) < 2) { ISpectrum spectrum = reader.GetSpectrum(i); spectrum = processer.Process(spectrum); foreach (var peak in spectrum.GetPeaks()) { Console.WriteLine(peak.GetMZ().ToString() + ": " + peak.GetIntensity().ToString()); } } } }