private void AddPeak(Dictionary <int, List <PeakEntry> > map, double maxPeakIntensity, int scan, Peak peak)
{
var mz = (int)(Math.Round(peak.Mz));
List <PeakEntry> entries;
if (!map.TryGetValue(mz, out entries))
{
entries = new List <PeakEntry>();
map[mz] = entries;
}
var relativeIntensity = peak.Intensity / maxPeakIntensity;
var gap = PrecursorUtils.ppm2mz(peak.Mz, options.ProductIonPPM);
PeakEntry entry = new PeakEntry()
{
Ion = new Peak(peak.Mz, peak.Intensity),
FromMz = peak.Mz - gap,
ToMz = peak.Mz + gap
};
entry.Intensities.Add(new SourcePeak(scan, peak.Mz, relativeIntensity));
entries.Add(entry);
}
private static void AddEntry(List <PeakEntry> entries, PeakEntry entry)
{
for (int i = 0; i < entries.Count; i++)
{
if (entries[i].FromMz > entry.FromMz)
{
entries.Insert(i, entry);
return;
}
}
entries.Add(entry);
}
private void AddPeak(List <PeakEntry> map, double maxPeakIntensity, int scan, Peak peak)
{
var relativeIntensity = peak.Intensity / maxPeakIntensity;
PeakEntry entry = new PeakEntry()
{
Ion = peak,
Intensities = new List <Pair <int, double> >()
};
entry.Intensities.Add(new Pair <int, double>(scan, relativeIntensity));
var ppm = PrecursorUtils.ppm2mz(peak.Mz, productIonPPM);
entry.FromMz = peak.Mz - ppm;
entry.ToMz = peak.Mz + ppm;
map.Add(entry);
}
private void AddPeak(Dictionary <int, List <PeakEntry> > map, double maxPeakIntensity, int scan, Peak peak, double mzTolerance)
{
var mz = (int)(Math.Round(peak.Mz));
List <PeakEntry> entries;
if (!map.TryGetValue(mz, out entries))
{
entries = new List <PeakEntry>();
map[mz] = entries;
}
var relativeIntensity = peak.Intensity / maxPeakIntensity;
PeakEntry entry = new PeakEntry()
{
Ion = new Peak(peak.Mz, peak.Intensity),
FromMz = peak.Mz - mzTolerance,
ToMz = peak.Mz + mzTolerance
};
entry.Intensities.Add(new SourcePeak(scan, peak.Mz, relativeIntensity));
entries.Add(entry);
}
