public MockTranPeakData(double[] data,
IonType ionType = IonType.a,
IsotopeLabelType labelType = null,
int charge = 2,
double?massError = null,
double libIntensity = 0,
double?isotopeProportion = null)
{
if (labelType == null)
{
labelType = IsotopeLabelType.light;
}
PeakData = new MockPeakData(data, massError) as TPeak;
var peptide = new Peptide(null, "AVVAVVA", null, null, 0);
var tranGroup = new TransitionGroup(peptide, null, charge, labelType);
int offset = ionType == IonType.precursor ? 6 : 0;
var isotopeInfo = isotopeProportion == null ? null : new TransitionIsotopeDistInfo(1, (float)isotopeProportion);
NodeTran = new TransitionDocNode(new Transition(tranGroup, ionType, offset, 0, charge, null),
null, 0, isotopeInfo, new TransitionLibInfo(1, (float)libIntensity));
}
public MockTranPeakData(double[] data,
IonType ionType = IonType.a,
IsotopeLabelType labelType = null,
int?charge = null,
double?massError = null,
double libIntensity = 0,
double?isotopeProportion = null)
{
if (labelType == null)
{
labelType = IsotopeLabelType.light;
}
PeakData = new MockPeakData(data, massError) as TPeak;
var peptide = new Peptide(null, "AVVAVVA", null, null, 0);
charge = charge ?? 2;
var tranGroup = new TransitionGroup(peptide, Adduct.FromChargeProtonated(charge), labelType);
int offset = ionType == IonType.precursor ? 6 : 0;
var isotopeInfo = isotopeProportion == null ? null : new TransitionIsotopeDistInfo(1, (float)isotopeProportion);
NodeTran = new TransitionDocNode(new Transition(tranGroup, ionType, offset, 0, Adduct.FromChargeProtonated(charge), null),
null, TypedMass.ZERO_MONO_MASSH, new TransitionDocNode.TransitionQuantInfo(isotopeInfo, new TransitionLibInfo(1, (float)libIntensity), true));
}
