public new static KDistProduct2 <T1, T2> FromMatlabStruct(MatlabStruct s)
{
// s = struct();
// s.className=class(this);
// kcount = length(this.kernels);
// kerCell = cell(1, kcount);
// for i=1:kcount
// kerCell{i} = this.kernels{i}.toStruct();
// end
// s.kernels = kerCell;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(KDistProduct2 <T1, T2>));
}
MatlabStruct[,] kerStructs = s.GetStructCells("kernels");
Kernel <T1> k1 = KDist <T1> .FromMatlabStruct(kerStructs[0, 0]);
Kernel <T2> k2 = KDist <T2> .FromMatlabStruct(kerStructs[0, 1]);
return(new KDistProduct2 <T1, T2>(k1, k2));
}
public static new CondFMFiniteOut FromMatlabStruct(MatlabStruct s)
{
// s.className=class(this);
// s.featureMap=this.featureMap.toStruct();
// s.regParam=this.regParam;
// s.mapMatrix=this.mapMatrix;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(CondFMFiniteOut));
}
MatlabStruct mapStruct = s.GetStruct("featureMap");
VectorMapper featureMap = VectorMapper.FromMatlabStruct(mapStruct);
// dz x numFeatures where dz is the dimension of output sufficient
// statistic
Matrix mapMatrix = s.GetMatrix("mapMatrix");
Console.WriteLine("{0}.mapMatrix size: ({1}, {2})", MATLAB_CLASS,
mapMatrix.Rows, mapMatrix.Cols);
return(new CondFMFiniteOut(featureMap, mapMatrix));
}
public static DistBuilderBase FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (className.Equals(DNormalBuilder.MATLAB_CLASS))
{
return(DNormalBuilder.FromMatlabStruct(s));
}
else if (className.Equals(DBetaBuilder.MATLAB_CLASS))
{
return(DBetaBuilder.FromMatlabStruct(s));
}
else if (className.Equals(DNormalLogVarBuilder.MATLAB_CLASS))
{
return(DNormalLogVarBuilder.FromMatlabStruct(s));
}
else if (className.Equals(DBetaLogBuilder.MATLAB_CLASS))
{
return(DBetaLogBuilder.FromMatlabStruct(s));
}
else
{
throw new ArgumentException("invalid MatlabStruct for a DistBuilder.");
}
}
public static new StackVectorMapper FromMatlabStruct(MatlabStruct s)
{
// s = struct();
// s.className=class(this);
// mapperCount = length(this.instancesMappers);
// mapperCell = cell(1, mapperCount);
// for i=1:mapperCount
// mapperCell{i} = this.instancesMappers{i}.toStruct();
// end
// s.instancesMappers = this.instancesMappers;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + MATLAB_CLASS);
}
object[,] mappersCell = s.GetCells("instancesMappers");
if (mappersCell.Length != 2)
{
throw new ArgumentException("instancesMappers should have length 2.");
}
int m = mappersCell.GetLength(1);
var maps = new VectorMapper[m];
for (int i = 0; i < m; i++)
{
var mapStruct = new MatlabStruct((Dictionary <string, object>)mappersCell[0, i]);
VectorMapper map = VectorMapper.FromMatlabStruct(mapStruct);
maps[i] = map;
}
return(new StackVectorMapper(maps));
}
public new static KGGaussian <T> FromMatlabStruct(MatlabStruct s)
{
// s = struct();
// s.className=class(this);
// s.kegauss = this.kegauss.toStruct();
// s.embed_width2 = this.embed_width2;
// s.width2 = this.width2;
//
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(KGGaussian <T>));
}
// KEGaussian<T> keGauss = KEGaussian<T>.FromMatlabStruct(s.GetStruct("kegauss"));
double[] embedSquaredWidths = s.Get1DDoubleArray("embed_width2s");
if (!MatrixUtils.IsAllPositive(embedSquaredWidths))
{
throw new ArgumentException("all embedding width^2's must be positive.");
}
double squaredWidth = s.GetDouble("width2");
if (squaredWidth <= 0)
{
throw new ArgumentException("width2 must be > 0");
}
return(new KGGaussian <T>(embedSquaredWidths, squaredWidth));
}
public new static DistArray <T> FromMatlabStruct(MatlabStruct s)
{
// s = struct();
// s.className=class(this);
// distCell = cell(1, length(this.distArray));
// for i=1:length(this.distArray)
// dist = this.distArray(i);
// distCell{i} = dist.toStruct();
// end
// s.distArray = distCell;
// s.mean = this.mean;
// s.variance = this.variance;
//
string className = s.GetString("className");
if (!className.Equals("DistArray"))
{
throw new ArgumentException("The input does not represent a " + "DistArray");
}
object[,] distCell = s.GetCells("distArray");
List <T> dists = new List <T>();
for (int i = 0; i < distCell.Length; i++)
{
var distDict = (Dictionary <string, object>)distCell[0, i];
MatlabStruct distStruct = new MatlabStruct(distDict);
IKEPDist disti = KEPDist.FromMatlabStruct(distStruct);
dists.Add((T)disti);
}
return(new DistArray <T>(dists));
}
public new static DBetaLogBuilder FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(DBetaLogBuilder));
}
return(DBetaLogBuilder.Instance);
}
public static DistMapper <T> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (className.Equals(GenericMapper <T> .MATLAB_CLASS))
{
return(GenericMapper <T> .FromMatlabStruct(s));
}
else
{
throw new ArgumentException("Unknown DistMapper to load.");
}
}
public new static Kernel2 <T1, T2> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (className.Equals(KDistProduct2 <T1, T2> .MATLAB_CLASS))
{
return(KDistProduct2 <T1, T2> .FromMatlabStruct(s));
}
else
{
throw new ArgumentException("Unknown class in MatlabStruct for Kernel2.");
}
}
public static DBeta FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(DBeta));
}
double a = s.GetDouble("alpha");
double b = s.GetDouble("beta");
return(new DBeta(a, b));
}
// return the expected number of incoming messages
// negative for any number.
// public abstract int NumInputMessages();
// Load a FeatureMap in Matlab represented by the input
// All FeatureMap objects can be serialized to struct with .toStruct()
public static VectorMapper FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
VectorMapper map = null;
if (className.Equals("RandFourierGaussMVMap"))
{
map = RFGMVMap.FromMatlabStruct(s);
}
else if (className.Equals("CondFMFiniteOut"))
{
map = CondFMFiniteOut.FromMatlabStruct(s);
}
// else if(className.Equals("CondCholFiniteOut")){
// map = CondCholFiniteOut.FromMatlabStruct(s);
// }
else if (className.Equals(RFGJointKGG.MATLAB_CLASS))
{
map = RFGJointKGG.FromMatlabStruct(s);
}
else if (className.Equals(StackVectorMapper.MATLAB_CLASS))
{
map = StackVectorMapper.FromMatlabStruct(s);
}
else if (className.Equals(BayesLinRegFM.MATLAB_CLASS))
{
map = BayesLinRegFM.FromMatlabStruct(s);
}
else if (className.Equals(UAwareVectorMapper.MATLAB_CLASS))
{
map = UAwareVectorMapper.FromMatlabStruct(s);
}
else if (className.Equals(UAwareStackVectorMapper.MATLAB_CLASS))
{
map = UAwareStackVectorMapper.FromMatlabStruct(s);
}
else
{
throw new ArgumentException("Unknown className: " + className);
}
// else if(className.Equals("RFGSumEProdMap")){
//
// }else if(className.Equals("RFGEProdMap")){
//
// }else if(className.Equals("RFGJointEProdMap")){
//
// }else if(className.Equals("RFGProductEProdMap")){
//
// }
return(map);
}
public new static RFGJointKGG FromMatlabStruct(MatlabStruct s)
{
// s.className=class(this);
// s.embed_width2s_cell = this.embed_width2s_cell;
// s.outer_width2 = this.outer_width2;
// s.numFeatures=this.numFeatures;
// s.innerNumFeatures = this.innerNumFeatures;
// s.eprodMap=this.eprodMap.toStruct();
// s.Wout = this.Wout;
// s.Bout = this.Bout;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + MATLAB_CLASS);
}
double outer_width2 = s.GetDouble("outer_width2");
int numFeatures = s.GetInt("numFeatures");
int innerNumFeatures = s.GetInt("innerNumFeatures");
MatlabStruct mapStruct = s.GetStruct("eprodMap");
RFGEProdMap eprodMap = RFGEProdMap.FromMatlabStruct(mapStruct);
Matrix Wout = s.GetMatrix("Wout");
if (innerNumFeatures != Wout.Rows)
{
throw new ArgumentException("inner #features must be = #rows of Wout");
}
if (numFeatures != Wout.Cols)
{
throw new ArgumentException("numFeatures must be = #cols of Wout");
}
Vector Bout = s.Get1DVector("Bout");
if (Bout.Count != numFeatures)
{
throw new ArgumentException("Bout must have length = numFeatures");
}
RFGJointKGG jointMap = new RFGJointKGG();
jointMap.outer_width2 = outer_width2;
jointMap.numFeatures = numFeatures;
jointMap.innerNumFeatures = innerNumFeatures;
jointMap.eprodMap = eprodMap;
jointMap.Wout = Wout;
jointMap.Bout = Bout;
// construct object
return(jointMap);
}
public new static KEGaussian <T> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(KEGaussian <T>));
}
double[] gwidth2s = s.Get1DDoubleArray("gwidth2s");
if (!MatrixUtils.IsAllPositive(gwidth2s))
{
throw new ArgumentException("all width^2's must be positive.");
}
return(new KEGaussian <T>(gwidth2s));
}
public new static UAwareVectorMapper FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
UAwareVectorMapper map = null;
if (className.Equals(MATLAB_CLASS))
{
map = null;
}
else
{
throw new ArgumentException("Unknown className: " + className);
}
return(map);
}
public new static IKEPDist FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (className.Equals(DNormal.MATLAB_CLASS))
{
return(DNormal.FromMatlabStruct(s));
}
else if (className.Equals(DBeta.MATLAB_CLASS))
{
return(DBeta.FromMatlabStruct(s));
}
else
{
throw new ArgumentException("unknown distribution class.");
}
}
public new static Kernel <T> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (className.Equals(KEGaussian <T> .MATLAB_CLASS))
{
return(KEGaussian <T> .FromMatlabStruct(s));
}
else if (className.Equals(KGGaussian <T> .MATLAB_CLASS))
{
return(KGGaussian <T> .FromMatlabStruct(s));
}
else
{
String msg = String.Format("Unknown class: {0}", className);
throw new ArgumentException(msg);
}
}
public static new BayesLinRegFM FromMatlabStruct(MatlabStruct s)
{
// s.className=class(this);
// s.featureMap=this.featureMap.toStruct();
// %s.regParam=this.regParam;
// s.mapMatrix=this.mapMatrix;
// s.posteriorCov = this.posteriorCov;
// s.noise_var = this.noise_var;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + MATLAB_CLASS);
}
MatlabStruct fmStruct = s.GetStruct("featureMap");
RandomFeatureMap featureMap = RandomFeatureMap.FromMatlabStruct(fmStruct);
// This is the same as a posterior mean
Vector mapMatrix = s.Get1DVector("mapMatrix");
if (mapMatrix.Count != featureMap.GetOutputDimension())
{
throw new ArgumentException("mapMatrix and featureMap's dimenions are incompatible.");
}
Matrix postCov = s.GetMatrix("posteriorCov");
if (postCov.Cols != featureMap.GetOutputDimension())
{
throw new ArgumentException("posterior covariance and featureMap's dimenions are incompatible.");
}
double noise_var = s.GetDouble("noise_var");
Vector crossCorr = s.Get1DVector("crossCorrelation");
var bayes = new BayesLinRegFM();
bayes.featureMap = featureMap;
bayes.posteriorMean = mapMatrix;
bayes.posteriorCov = postCov;
bayes.noiseVar = noise_var;
bayes.crossCorr = crossCorr;
// No need to do the initial batch train because we loaded the result
// from .mat.
bayes.WillNeedInitialTrain = false;
return(bayes);
}
public static DNormal FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + typeof(DNormal));
}
Vector meanVec = s.Get1DVector("mean");
if (meanVec.Count != 1)
{
throw new ArgumentException("mean vector is not 1 dimenion.");
}
double mean = meanVec[0];
double variance = s.GetDouble("variance");
return(new DNormal(mean, variance));
}
// construct a RFGMap from MatlabStruct.
// Matlab objects of class RandFourierGaussMap.
// See RandFourierGaussMap.toStruct()
public static RFGMap FromMatlabStruct(MatlabStruct s)
{
// s.className = class(this);
// s.gwidth2=this.gwidth2;
// s.numFeatures=this.numFeatures;
// s.dim=this.dim;
// s.W=this.W;
// s.B=this.B;
string className = s.GetString("className");
if (!className.Equals("RandFourierGaussMap"))
{
throw new ArgumentException("The input does not represent a " + typeof(RFGMap));
}
double gwidth2 = s.GetDouble("gwidth2");
int numFeatures = s.GetInt("numFeatures");
// int dim = s.GetInt("dim");
Matrix W = s.GetMatrix("W");
if (W.Rows <= 0 || W.Cols <= 0)
{
throw new Exception("Loaded weight matrix has collapsed dimensions");
}
if (numFeatures != W.Cols)
{
// expect W to be dim x numFeatures
throw new ArgumentException("Loaded weight matrix's #cols does not match numFeatures.");
}
Vector B = s.Get1DVector("B");
// construct object
RFGMap map = new RFGMap();
map.GaussWidthSq = gwidth2;
map.WeightMatrix = W;
map.BiasVector = B;
Console.WriteLine("mapMatrix W's size: ({0}, {1})", W.Rows, W.Cols);
Console.WriteLine("bias vector length: {0}", B.Count);
return(map);
}
public new static GenericMapper <T> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
if (!(className.Equals(MATLAB_CLASS) ||
className.Equals(UAwareGenericMapper <T> .MATLAB_CLASS)))
{
throw new ArgumentException("The input does not represent a " +
typeof(GenericMapper <T>));
}
// nv = number of variables.
// int inVars = s.GetInt("nv");
MatlabStruct rawOperator = s.GetStruct("operator");
VectorMapper instancesMapper = VectorMapper.FromMatlabStruct(rawOperator);
MatlabStruct rawBuilder = s.GetStruct("distBuilder");
DistBuilder <T> distBuilder = DistBuilderBase.FromMatlabStruct(rawBuilder)
as DistBuilder <T>;
return(new GenericMapper <T>(instancesMapper, distBuilder));
}
public static TensorInstances <T1, T2> FromMatlabStruct(MatlabStruct s)
{
// s = struct();
// s.className=class(this);
// instancesCount = length(this.instancesCell);
// cellStruct = cell(1, instancesCount);
// for i=1:instancesCount
// cellStruct = this.instancesCell{i}.toStruct();
// end
// s.instancesCell = cellStruct;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " +
typeof(TensorInstances <T1, T2>));
}
int instancesCount = s.GetInt("instancesCount");
if (instancesCount != 2)
{
throw new ArgumentException("expect instancesCount to be 2.");
}
object[,] instancesCell = s.GetCells("instancesCell");
if (instancesCell.Length != 2)
{
throw new ArgumentException("instancesCell does not have length 2.");
}
var da1Dict = (Dictionary <string, object>)instancesCell[0, 0];
var da2Dict = (Dictionary <string, object>)instancesCell[0, 1];
// assume instancesCell contains DistArray's
DistArray <T1> da1 = DistArray <T1> .FromMatlabStruct(
new MatlabStruct(da1Dict));
DistArray <T2> da2 = DistArray <T2> .FromMatlabStruct(
new MatlabStruct(da2Dict));
return(new TensorInstances <T1, T2>(da1.GetDists(), da2.GetDists()));
}
public new static RFGEProdMap FromMatlabStruct(MatlabStruct s)
{
// s.className=class(this);
// s.gwidth2=this.gwidth2;
// s.numFeatures=this.numFeatures;
// s.W=this.W;
// s.B=this.B;
string className = s.GetString("className");
if (!className.Equals(MATLAB_CLASS))
{
throw new ArgumentException("The input does not represent a " + MATLAB_CLASS);
}
// Vector of Gaussian width^2 for the mebedding kernel, one for
// each dimension of the input.
// Can be a scalar i.e., same param for each dimension.
// double[] gwidth2 = s.Get1DDoubleArray("gwidth2");
int numFeatures = s.GetInt("numFeatures");
// weight matrix. dim x numFeatures.
Matrix W = s.GetMatrix("W");
if (W.Cols != numFeatures)
{
throw new ArgumentException("numFeatures should be = #cols of W");
}
// coefficients b. a vector of length numFeatures.
// Drawn form U[0, 2*pi]
Vector B = s.Get1DVector("B");
// int numFeatures = s.GetInt("numFeatures");
RFGEProdMap map = new RFGEProdMap();
// map.gwidth2 = gwidth2;
map.numFeatures = numFeatures;
map.W = W;
map.B = B;
return(map);
}
// construct a RFGMVMap from MatlabStruct.
// Matlab objects of class RadnFourierGaussMVMap.
// See RandFourierGaussMVMap.toStruct()
public new static RFGMVMap FromMatlabStruct(MatlabStruct s)
{
// s.className=class(this);
// s.mwidth2s=this.mwidth2s;
// s.vwidth2s=this.vwidth2s;
// s.numFeatures=this.numFeatures;
// s.rfgMap=this.rfgMap.toStruct();
string className = s.GetString("className");
if (!className.Equals("RandFourierGaussMVMap"))
{
throw new ArgumentException("The input does not represent a " + typeof(RFGMVMap));
}
// Gaussian width for mean of each input.
Vector mwidth2s = s.Get1DVector("mwidth2s");
Vector vwidth2s = s.Get1DVector("vwidth2s");
// int numFeatures = s.GetInt("numFeatures");
RFGMap rfgMap = RFGMap.FromMatlabStruct(s.GetStruct("rfgMap"));
// construct object
return(new RFGMVMap(mwidth2s, vwidth2s, rfgMap));
}
public static RandomFeatureMap FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
RandomFeatureMap map = null;
if (className.Equals(RFGJointKGG.MATLAB_CLASS))
{
map = RFGJointKGG.FromMatlabStruct(s);
}
else
{
throw new ArgumentException("Unknown className: " + className);
}
// else if(className.Equals("RFGSumEProdMap")){
//
// }else if(className.Equals("RFGEProdMap")){
//
// }else if(className.Equals("RFGJointEProdMap")){
//
// }else if(className.Equals("RFGProductEProdMap")){
//
// }
return(map);
}
public static Kernel <T> FromMatlabStruct(MatlabStruct s)
{
string className = s.GetString("className");
throw new NotImplementedException();
}