public IImageProcessor GetImageProcessor(IRobot robot, IProcessingInfo processingInfo)
{
IPlateInfo plateInfo = _pip.GetPlateInfo(robot, processingInfo.PlateID);
IPlateType plateType = _pip.GetPlateType(robot, plateInfo.PlateTypeID);
return(new ImageProcessor2(robot, processingInfo, plateInfo, plateType));
}
/// <summary>
/// Construct an IImageProcessor instance for the specified IRobot and IProcessingInfo.
/// </summary>
/// <param name="robot">The Robot that took the images to be processed by this IImageProcessor instance</param>
/// <param name="processingInfo">The description of the images to be processed by this IImageProcessor instance</param>
public ImageProcessor2(IRobot robot, IProcessingInfo processingInfo, IPlateInfo plateInfo, IPlateType plateType)
{
// Get Logger.
_log = LogManager.GetLogger(this.GetType());
_dateImaged = DateTime.MinValue;
_lightPath = 0;
_robot = robot;
_processingInfo = processingInfo;
_plateInfo = plateInfo;
_plateType = plateType;
_captureInfo = null;
SetRegionName(_processingInfo.RegionID);
SetProfileName(_processingInfo.ProfileID);
_log.Info(
"DropNumber=" + processingInfo.DropNumber +
";ImagingID=\"" + processingInfo.ImagingID + "\"" +
";PlatedID=\"" + processingInfo.PlateID + "\"" +
";ProfileID=\"" + processingInfo.ProfileID + "\"" +
";RegionID=\"" + processingInfo.RegionID + "\"" +
";RegionType=" + processingInfo.RegionType.ToString() +
";WellNumber=" + processingInfo.WellNumber +
";Robot.Name=\"" + _robot.Name + "\"");
}
private void btnGetPlateInfo_Click(object sender, System.EventArgs e)
{
// Cursor to wait
this.Cursor = Cursors.WaitCursor;
IPlateInfo pi = pip.GetPlateInfo(getRobot(), getBarcode());
txtOutput.Text = "";
if (pi == null)
{
txtOutput.AppendText("GetPlateInfo(robot, plateID) returned null");
}
else
{
txtOutput.AppendText("DateDispensed = " + pi.DateDispensed.ToString() + "\r\n");
txtOutput.AppendText("ExperimentName = " + pi.ExperimentName + "\r\n");
txtOutput.AppendText("PlateNumber = " + pi.PlateNumber + "\r\n");
txtOutput.AppendText("PlateTypeID = " + pi.PlateTypeID + "\r\n");
txtOutput.AppendText("ProjectName = " + pi.ProjectName + "\r\n");
txtOutput.AppendText("UserEmail = " + pi.UserEmail + "\r\n");
txtOutput.AppendText("UserName = "******"\r\n");
}
// Cursor to deafult
this.Cursor = Cursors.Default;
}
/// <summary>
/// This method is intended to cause any resources that are no
/// longer necessary to be released
/// </summary>
void IDisposable.Dispose()
{
_regionName = null;
_profileName = null;
_captureInfo = null;
_robot = null;
_processingInfo = null;
_plateInfo = null;
_plateType = null;
}
public void GetFilenameTest1()
{
IImageInfo imageInfo = null; // TODO: Initialize to an appropriate value
IProcessingInfo processingInfo = null; // TODO: Initialize to an appropriate value
IPlateInfo plateInfo = null; // TODO: Initialize to an appropriate value
IPlateType plateType = null; // TODO: Initialize to an appropriate value
string expected = string.Empty; // TODO: Initialize to an appropriate value
string actual;
actual = FileUtils.GetFilename(imageInfo, processingInfo, plateInfo, plateType);
Assert.AreEqual(expected, actual);
Assert.Inconclusive("Verify the correctness of this test method.");
}
/// <summary>
/// Called once per lifetime before any calls to SetImageInfo.
/// </summary>
/// <param name="captureInfo">The ICaptureInfo to use</param>
public void SetCaptureInfo(ICaptureInfo captureInfo)
{
_captureInfo = captureInfo;
_log.Info("SetCaptureInfo(captureInfo=" + CaptureInfo.ToString(captureInfo) + ")");
ICaptureInfoExtendedProperties iceip = captureInfo as ICaptureInfoExtendedProperties;
if (null != iceip)
{
_log.Debug("captureInfo is an ICaptureInfoExtendedProperties!");
this._dateImaged = iceip.DateImaged.ToUniversalTime();
this._lightPath = iceip.LightPath;
this._plateInfo = iceip.PlateInfo;
this._plateType = iceip.PlateType;
}
else
{
// JMD Had to change the default
//int lightPath = 0;
int lightPath = 1;
foreach (IProperty p in _captureInfo.Properties)
{
//_log.Info(p.Name + "=" + p.Value);
// JMD Broken as of 31/03/2011
//if (p.Name.EndsWith("UV"))
//{
// lightPath = 1;
// break;
//}
// Try again looking for a visible-only property
if (("ImagingCondenser".Equals(p.Name)) || ("ImagingPolarizer".Equals(p.Name)))
{
lightPath = 0;
break;
}
}
_lightPath = lightPath;
}
}
protected virtual void Dispose(bool disposing)
{
if (!this.disposed)
{
if (disposing)
{
// dispose managed resources
}
// free native resources
_regionName = null;
_profileName = null;
_captureInfo = null;
_robot = null;
_processingInfo = null;
_plateInfo = null;
_plateType = null;
disposed = true;
}
}
/// <summary>
/// This should result in %BARCODE-%WELL-%DROP-R%R%RTP%P-%IT[%II]-z%Z-%DATE-%TIME, eg:
/// 441312000010-A01-2-R0DRP1-EF-z20-20100316-083621
/// 441312000010-A01-2-R0DRP1-FL1-z20-20100316-083621
/// </summary>
/// <param name="imageInfo"></param>
/// <param name="processingInfo"></param>
/// <param name="plateInfo"></param>
/// <param name="plateType"></param>
/// <returns></returns>
public static string GetFilename(IImageInfo imageInfo, IProcessingInfo processingInfo, IPlateInfo plateInfo, IPlateType plateType)
{
string filename = "";
filename += processingInfo.PlateID + "-";
filename += OPPF.Integrations.ImagerLink.PlateType.WellNumberToString(plateType, processingInfo.WellNumber) + "-";
filename += processingInfo.DropNumber + "-";
filename += "R" + processingInfo.RegionID; // Usually 0
switch (processingInfo.RegionType) // Usually Drop
{
case RegionType.Drop:
filename += "DR";
break;
case RegionType.Overview:
filename += "OV";
break;
case RegionType.RegionOfInterest:
filename += "RI";
break;
}
filename += "P" + processingInfo.ProfileID + "-"; // Usually 1
switch (imageInfo.ImageType)
{
case ImageType.BestFocus:
filename += "BF";
break;
case ImageType.DropLocation:
filename += "DL";
break;
case ImageType.ExtendedFocus:
filename += "EF";
break;
case ImageType.FocusLevel:
filename += "FL" + imageInfo.ImageIndex;
break;
}
if (imageInfo.IsZNull)
{
filename += "-zN-";
}
else
{
filename += "-z" + System.Convert.ToInt32(imageInfo.Z) + "-";
}
// Assuming ImagingID is plateID-DATE-TIME format.... (with no dashes in the plateID!)
filename += processingInfo.ImagingID.Remove(0, processingInfo.ImagingID.IndexOf("-") + 1);
return(filename);
}
