/// <summary> Adds the atom oAtom to a specified Monomer.
///
/// </summary>
/// <param name="oAtom"> The atom to add
/// </param>
/// <param name="oMonomer"> The monomer the atom belongs to
/// </param>
public virtual void addAtom(IAtom oAtom, IMonomer oMonomer)
{
if (!contains(oAtom))
{
base.addAtom(oAtom);
if (oMonomer != null)
{
// Not sure what's better here...throw nullpointer exception?
oMonomer.addAtom(oAtom);
if (!monomers.ContainsKey(oMonomer.MonomerName))
{
monomers[oMonomer.MonomerName] = oMonomer;
}
}
}
/* notifyChanged() is called by addAtom in
* AtomContainer */
}
/// <summary>
/// Adds the atom oAtom to a specific Monomer.
///
/// </summary>
/// <param name="oAtom"> The atom to add
/// </param>
/// <param name="oMonomer"> The monomer the atom belongs to
///
/// </param>
public virtual void addAtom(IAtom oAtom, IMonomer oMonomer)
{
int atomCount = base.AtomCount;
// Add atom to AtomContainer
base.addAtom(oAtom);
if (atomCount != base.AtomCount)
{
// ok, super did not yet contain the atom
if (oMonomer == null)
{
oMonomer = getMonomer("");
}
oMonomer.addAtom(oAtom);
if (!monomers.ContainsKey(oMonomer.MonomerName))
{
monomers[oMonomer.MonomerName] = oMonomer;
}
}
}
/// <summary> Adds the atom oAtom to a specified Monomer.
///
/// </summary>
/// <param name="oAtom"> The atom to add
/// </param>
/// <param name="oMonomer"> The monomer the atom belongs to
/// </param>
public virtual void addAtom(IAtom oAtom, IMonomer oMonomer)
{
if (!contains(oAtom))
{
base.addAtom(oAtom);
if (oMonomer != null)
{
// Not sure what's better here...throw nullpointer exception?
oMonomer.addAtom(oAtom);
if (!monomers.ContainsKey(oMonomer.MonomerName))
{
monomers[oMonomer.MonomerName] = oMonomer;
}
}
}
/* notifyChanged() is called by addAtom in
AtomContainer */
}