public RandomPopulationFactory(
IObjectBaseFactory objectBaseFactory,
IProgressManager progressManager,
IIndividualModelTask individualModelTask,
ICreateIndividualAlgorithm createIndividualAlgorithm,
IIndividualToIndividualValuesMapper individualValuesMapper,
IContainerTask containerTask,
ICloner cloner,
IDistributedParametersUpdater distributedParametersUpdater,
IReportGenerator reportGenerator,
IMoleculeParameterVariabilityCreator moleculeParameterVariabilityCreator,
IMoleculeOntogenyVariabilityUpdater moleculeOntogenyVariabilityUpdater,
IDiseaseStateImplementationFactory diseaseStateImplementationFactory)
{
_objectBaseFactory = objectBaseFactory;
_progressManager = progressManager;
_individualModelTask = individualModelTask;
_createIndividualAlgorithm = createIndividualAlgorithm;
_individualValuesMapper = individualValuesMapper;
_containerTask = containerTask;
_cloner = cloner;
_distributedParametersUpdater = distributedParametersUpdater;
_reportGenerator = reportGenerator;
_moleculeParameterVariabilityCreator = moleculeParameterVariabilityCreator;
_moleculeOntogenyVariabilityUpdater = moleculeOntogenyVariabilityUpdater;
_diseaseStateImplementationFactory = diseaseStateImplementationFactory;
}
protected override void Context()
{
_createIndvidualAlgorithm = A.Fake <ICreateIndividualAlgorithm>();
_entityBaseFactory = A.Fake <IObjectBaseFactory>();
_individualModelTask = A.Fake <IIndividualModelTask>();
_speciesRepository = A.Fake <ISpeciesRepository>();
_entityValidator = A.Fake <IEntityValidator>();
_reportGenerator = A.Fake <IReportGenerator>();
_genderRepository = A.Fake <IGenderRepository>();
_moleculeOntogenyVariabilityUpdater = A.Fake <IMoleculeOntogenyVariabilityUpdater>();
_diseaseStateImplementationRepository = A.Fake <IDiseaseStateImplementationFactory>();
sut = new IndividualFactory(
_individualModelTask,
_entityBaseFactory,
_createIndvidualAlgorithm,
_speciesRepository,
_entityValidator,
_reportGenerator,
_moleculeOntogenyVariabilityUpdater,
_genderRepository,
_diseaseStateImplementationRepository
);
_age = DomainHelperForSpecs.ConstantParameterWithValue().WithName(CoreConstants.Parameters.AGE);
_gestationalAge = DomainHelperForSpecs.ConstantParameterWithValue().WithName(Constants.Parameters.GESTATIONAL_AGE);
_height = DomainHelperForSpecs.ConstantParameterWithValue().WithName(CoreConstants.Parameters.HEIGHT);
_weight = DomainHelperForSpecs.ConstantParameterWithValue().WithName(CoreConstants.Parameters.WEIGHT);
_bmi = DomainHelperForSpecs.ConstantParameterWithValue().WithName(CoreConstants.Parameters.BMI);
}
public IndividualFactory(
IIndividualModelTask individualModelTask,
IObjectBaseFactory objectBaseFactory,
ICreateIndividualAlgorithm createIndividualAlgorithm,
ISpeciesRepository speciesRepository,
IEntityValidator entityValidator,
IReportGenerator reportGenerator,
IMoleculeOntogenyVariabilityUpdater ontogenyVariabilityUpdater,
IGenderRepository genderRepository,
IDiseaseStateImplementationFactory diseaseStateImplementationFactory)
{
_individualModelTask = individualModelTask;
_objectBaseFactory = objectBaseFactory;
_createIndividualAlgorithm = createIndividualAlgorithm;
_speciesRepository = speciesRepository;
_entityValidator = entityValidator;
_reportGenerator = reportGenerator;
_ontogenyVariabilityUpdater = ontogenyVariabilityUpdater;
_genderRepository = genderRepository;
_diseaseStateImplementationFactory = diseaseStateImplementationFactory;
}
public ExpressionProfileUpdater(
IParameterSetUpdater parameterSetUpdater,
IContainerTask containerTask,
IOntogenyTask ontogenyTask,
ICloner cloner,
IPKSimProjectRetriever projectRetriever,
ILazyLoadTask lazyLoadTask,
IParameterIdUpdater parameterIdUpdater,
IExecutionContext executionContext,
IDiseaseStateImplementationFactory diseaseStateImplementationFactory)
{
_parameterSetUpdater = parameterSetUpdater;
_containerTask = containerTask;
_ontogenyTask = ontogenyTask;
_cloner = cloner;
_projectRetriever = projectRetriever;
_lazyLoadTask = lazyLoadTask;
_parameterIdUpdater = parameterIdUpdater;
_executionContext = executionContext;
_diseaseStateImplementationFactory = diseaseStateImplementationFactory;
}
