public ExpressionProfileTask(
IExecutionContext executionContext,
IBuildingBlockTask buildingBlockTask,
IApplicationController applicationController) :
base(executionContext, buildingBlockTask, applicationController, PKSimBuildingBlockType.ExpressionProfile)
{
}
protected override void Context()
{
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_buildingBlockToDelete = A.Fake <IPKSimBuildingBlock>();
sut = new DeleteBuildingBlockUICommand(_buildingBlockTask);
sut.For(_buildingBlockToDelete);
}
public BuildingBlockExplorerPresenter(IBuildingBlockExplorerView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory, IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IBuildingBlockIconRetriever buildingBlockIconRetriever,
IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, IToolTipPartCreator toolTipPartCreator, IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IObservedDataInExplorerPresenter observedDataInExplorerPresenter)
: base(view, treeNodeFactory, treeNodeContextMenuFactory, multipleTreeNodeContextMenuFactory, buildingBlockIconRetriever, regionResolver, buildingBlockTask, RegionNames.BuildingBlockExplorer, projectRetriever, classificationPresenter, toolTipPartCreator)
{
_observedDataInExplorerPresenter = observedDataInExplorerPresenter;
_observedDataInExplorerPresenter.InitializeWith(this, classificationPresenter, RootNodeTypes.ObservedDataFolder);
}
protected override void Context()
{
_entityToClone = A.Fake <IPKSimBuildingBlock>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
sut = new CloneBuildingBlockCommand <IPKSimBuildingBlock>(_buildingBlockTask);
sut.For(_entityToClone);
}
public RenameBuildingBlockTask(
IBuildingBlockTask buildingBlockTask,
IBuildingBlockInProjectManager buildingBlockInProjectManager,
IApplicationController applicationController,
ILazyLoadTask lazyLoadTask, IContainerTask containerTask,
IHeavyWorkManager heavyWorkManager,
IRenameAbsolutePathVisitor renameAbsolutePathVisitor,
IObjectReferencingRetriever objectReferencingRetriever,
IProjectRetriever projectRetriever,
IParameterIdentificationSimulationPathUpdater simulationPathUpdater,
IDataRepositoryNamer dataRepositoryNamer,
ICurveNamer curveNamer,
IExpressionProfileUpdater expressionProfileUpdater)
{
_buildingBlockTask = buildingBlockTask;
_buildingBlockInProjectManager = buildingBlockInProjectManager;
_applicationController = applicationController;
_lazyLoadTask = lazyLoadTask;
_containerTask = containerTask;
_heavyWorkManager = heavyWorkManager;
_renameAbsolutePathVisitor = renameAbsolutePathVisitor;
_objectReferencingRetriever = objectReferencingRetriever;
_projectRetriever = projectRetriever;
_simulationPathUpdater = simulationPathUpdater;
_dataRepositoryNamer = dataRepositoryNamer;
_curveNamer = curveNamer;
_expressionProfileUpdater = expressionProfileUpdater;
}
protected override void Context()
{
_applicationController = A.Fake <IApplicationController>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_buildingBlockInSimulationManager = A.Fake <IBuildingBlockInSimulationManager>();
_lazyloadTask = A.Fake <ILazyLoadTask>();
_heavyWorkManager = A.Fake <IHeavyWorkManager>();
_containerTask = A.Fake <IContainerTask>();
_objectReferencingRetriever = A.Fake <IObjectReferencingRetriever>();
_projectRetriever = A.Fake <IProjectRetriever>();
_renameAbsolutePathVisitor = new RenameAbsolutePathVisitor();
_objectPathFactory = new ObjectPathFactoryForSpecs();
_parameterIdentificationSimulationPathUpdater = A.Fake <IParameterIdentificationSimulationPathUpdater>();
_dataRepositoryNamer = A.Fake <IDataRepositoryNamer>();
_curveNamer = A.Fake <ICurveNamer>();
sut = new RenameBuildingBlockTask(_buildingBlockTask, _buildingBlockInSimulationManager, _applicationController, _lazyloadTask,
_containerTask, _heavyWorkManager, _renameAbsolutePathVisitor, _objectReferencingRetriever, _projectRetriever, _parameterIdentificationSimulationPathUpdater, _dataRepositoryNamer, _curveNamer);
_initialSimulationName = "S";
_individualSimulation = new IndividualSimulation().WithName(_initialSimulationName);
_individualSimulation.Model = new Model().WithName(_initialSimulationName);
_simulation = _individualSimulation;
_root = new Container().WithName(_initialSimulationName);
_individualSimulation.Model.Root = _root;
}
protected override void Context()
{
_dialogCreator = A.Fake <IDialogCreator>();
_applicationConfiguration = A.Fake <IApplicationConfiguration>();
_contentLoader = A.Fake <IContentLoader>();
_mobiExportTask = A.Fake <IMoBiExportTask>();
_relatedItemSerializer = A.Fake <IRelatedItemSerializer>();
_observedDataTask = A.Fake <IObservedDataTask>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_objectIdResetter = A.Fake <IObjectIdResetter>();
_withIdRepository = A.Fake <IWithIdRepository>();
_parameterIdentificationTask = A.Fake <IParameterIdentificationTask>();
_sensitivityAnalysisTask = A.Fake <ISensitivityAnalysisTask>();
sut = new ReloadRelatedItemTask(_applicationConfiguration, _contentLoader, _dialogCreator,
_mobiExportTask, _relatedItemSerializer, _observedDataTask, _buildingBlockTask, _objectIdResetter, _withIdRepository, _parameterIdentificationTask, _sensitivityAnalysisTask);
_relatedItem = new RelatedItem {
FullPath = _fullPath, Content = new Content {
Data = new byte[] { 10, 20 }
}
};
A.CallTo(() => _applicationConfiguration.Product).Returns(Origins.PKSim);
}
public ExportSimulationSnapshotUICommand(SimulationMapper simulationMapper, IPKSimProjectRetriever projectRetriever, IBuildingBlockTask buildingBlockTask, ISnapshotTask snapshotTask)
{
_simulationMapper = simulationMapper;
_projectRetriever = projectRetriever;
_buildingBlockTask = buildingBlockTask;
_snapshotTask = snapshotTask;
}
public CompoundTask(IExecutionContext executionContext, IBuildingBlockTask buildingBlockTask, IApplicationController applicationController,
IBuildingBlockRepository buildingBlockRepository, IDialogCreator dialogCreator)
: base(executionContext, buildingBlockTask, applicationController, PKSimBuildingBlockType.Compound)
{
_buildingBlockRepository = buildingBlockRepository;
_dialogCreator = dialogCreator;
}
public SimulationSubjectTask(IIndividualTask individualTask, IPopulationTask populationTask,
IApplicationController applicationController, IBuildingBlockTask buildingBlockTask)
{
_individualTask = individualTask;
_populationTask = populationTask;
_applicationController = applicationController;
_buildingBlockTask = buildingBlockTask;
}
public ObserverSetTask(
IExecutionContext executionContext,
IBuildingBlockTask buildingBlockTask,
IApplicationController applicationController
) :
base(executionContext, buildingBlockTask, applicationController, PKSimBuildingBlockType.ObserverSet)
{
}
protected override void Context()
{
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_importPopulationPresenter = A.Fake <IImportPopulationPresenter>();
_applicationController = A.Fake <IApplicationController>();
A.CallTo(() => _applicationController.Start <IImportPopulationPresenter>()).Returns(_importPopulationPresenter);
sut = new ImportPopulationCommand(_applicationController, _buildingBlockTask);
}
public FormulationTask(IExecutionContext executionContext, IBuildingBlockTask buildingBlockTask, IApplicationController applicationController, IDataImporter dataImporter,
IDimensionRepository dimensionRepository, IFormulaFactory formulaFactory)
: base(executionContext, buildingBlockTask, applicationController, PKSimBuildingBlockType.Formulation)
{
DimensionRepository = dimensionRepository;
_dataImporter = dataImporter;
_dimensionRepository = dimensionRepository;
_formulaFactory = formulaFactory;
}
public CloneSimulationTask(IBuildingBlockTask buildingBlockTask, IExecutionContext executionContext, IBuildingBlockInSimulationManager buildingBlockInSimulationManager,
ISimulationSettingsRetriever simulationSettingsRetriever, ISimulationResultsTask simulationResultsTask, IApplicationController applicationController)
{
_buildingBlockTask = buildingBlockTask;
_executionContext = executionContext;
_buildingBlockInSimulationManager = buildingBlockInSimulationManager;
_simulationSettingsRetriever = simulationSettingsRetriever;
_simulationResultsTask = simulationResultsTask;
_applicationController = applicationController;
}
public CloneSimulationTask(IBuildingBlockTask buildingBlockTask, IBuildingBlockInProjectManager buildingBlockInProjectManager,
ISimulationSettingsRetriever simulationSettingsRetriever, ISimulationResultsTask simulationResultsTask, IApplicationController applicationController, IRenameBuildingBlockTask renameBuildingBlockTask)
{
_buildingBlockTask = buildingBlockTask;
_buildingBlockInProjectManager = buildingBlockInProjectManager;
_simulationSettingsRetriever = simulationSettingsRetriever;
_simulationResultsTask = simulationResultsTask;
_applicationController = applicationController;
_renameBuildingBlockTask = renameBuildingBlockTask;
}
protected override void Context()
{
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_buildingBlockInSimulationManager = A.Fake <IBuildingBlockInSimulationManager>();
_simulationSettingsRetriever = A.Fake <ISimulationSettingsRetriever>();
_simulationResultsTask = A.Fake <ISimulationResultsTask>();
_applicationController = A.Fake <IApplicationController>();
_renameBuildingBlockTask = A.Fake <IRenameBuildingBlockTask>();
sut = new CloneSimulationTask(_buildingBlockTask, _buildingBlockInSimulationManager, _simulationSettingsRetriever, _simulationResultsTask, _applicationController, _renameBuildingBlockTask);
}
public SimulationTask(IExecutionContext executionContext, IBuildingBlockTask buildingBlockTask, IApplicationController applicationController,
ISimulationBuildingBlockUpdater simulationBuildingBlockUpdater, IConfigureSimulationTask configureSimulationTask,
IBuildingBlockParametersToSimulationUpdater blockParametersToSimulationUpdater, ISimulationParametersToBuildingBlockUpdater simulationParametersToBlockUpdater)
: base(executionContext, buildingBlockTask, applicationController, PKSimBuildingBlockType.Simulation)
{
_simulationBuildingBlockUpdater = simulationBuildingBlockUpdater;
_configureSimulationTask = configureSimulationTask;
_blockParametersToSimulationUpdater = blockParametersToSimulationUpdater;
_simulationParametersToBlockUpdater = simulationParametersToBlockUpdater;
}
protected override void Context()
{
_individualTask = A.Fake <IIndividualTask>();
_applicationController = A.Fake <IApplicationController>();
_populationTask = A.Fake <IPopulationTask>();
_presenter = A.Fake <ISimulationSubjectSelectionPresenter>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
A.CallTo(() => _applicationController.Start <ISimulationSubjectSelectionPresenter>()).Returns(_presenter);
sut = new SimulationSubjectTask(_individualTask, _populationTask, _applicationController, _buildingBlockTask);
}
public SimulationExplorerPresenter(ISimulationExplorerView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IBuildingBlockIconRetriever buildingBlockIconRetriever,
IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, IBuildingBlockInSimulationManager buildingBlockInSimulationManager,
IToolTipPartCreator toolTipPartCreator, IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IParameterAnalysablesInExplorerPresenter parameterAnalysablesInExplorerPresenter, IObservedDataInSimulationManager observedDataInSimulationManager) :
base(view, treeNodeFactory, treeNodeContextMenuFactory, multipleTreeNodeContextMenuFactory, buildingBlockIconRetriever, regionResolver, buildingBlockTask, RegionNames.SimulationExplorer, projectRetriever, classificationPresenter, toolTipPartCreator)
{
_buildingBlockInSimulationManager = buildingBlockInSimulationManager;
_parameterAnalysablesInExplorerPresenter = parameterAnalysablesInExplorerPresenter;
_observedDataInSimulationManager = observedDataInSimulationManager;
_parameterAnalysablesInExplorerPresenter.InitializeWith(this, classificationPresenter);
}
public ConfigureSimulationTask(IBuildingBlockTask buildingBlockTask, IActiveSubjectRetriever activeSubjectRetriever,
ISimulationSettingsRetriever simulationSettingsRetriever, IApplicationController applicationController, IExecutionContext executionContext,
IParameterIdUpdater parameterIdUpdater, ISimulationResultsTask simulationResultsTask)
{
_buildingBlockTask = buildingBlockTask;
_activeSubjectRetriever = activeSubjectRetriever;
_simulationSettingsRetriever = simulationSettingsRetriever;
_applicationController = applicationController;
_executionContext = executionContext;
_parameterIdUpdater = parameterIdUpdater;
_simulationResultsTask = simulationResultsTask;
}
protected ExplorerPresenter(TView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory,
IBuildingBlockIconRetriever buildingBlockIconRetriever, IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, RegionName regionName,
IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IToolTipPartCreator toolTipPartCreator) :
base(view, regionResolver, classificationPresenter, toolTipPartCreator, regionName, projectRetriever)
{
_treeNodeFactory = treeNodeFactory;
_treeNodeContextMenuFactory = treeNodeContextMenuFactory;
_multipleTreeNodeContextMenuFactory = multipleTreeNodeContextMenuFactory;
_buildingBlockIconRetriever = buildingBlockIconRetriever;
_buildingBlockTask = buildingBlockTask;
}
protected override void Context()
{
_executionContext = A.Fake <IExecutionContext>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_applicationController = A.Fake <IApplicationController>();
_compound = new Compound().WithId("Drug").WithName("Drug");
_buildingBlockRepository = A.Fake <IBuildingBlockRepository>();
_dialogCreator = A.Fake <IDialogCreator>();
sut = new CompoundTask(_executionContext, _buildingBlockTask, _applicationController, _buildingBlockRepository, _dialogCreator);
A.CallTo(() => _buildingBlockTask.SaveAsTemplate(A <ICache <IPKSimBuildingBlock, IReadOnlyList <IPKSimBuildingBlock> > > ._, TemplateDatabaseType.User))
.Invokes(x => _cache = x.GetArgument <ICache <IPKSimBuildingBlock, IReadOnlyList <IPKSimBuildingBlock> > >(0));
}
protected override void Context()
{
_executionContext = A.Fake <IExecutionContext>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_applicationController = A.Fake <IApplicationController>();
_activeSubjectRetriever = A.Fake <IActiveSubjectRetriever>();
_simulationSettingsRetriever = A.Fake <ISimulationSettingsRetriever>();
_parameterIdUpdater = A.Fake <IParameterIdUpdater>();
_simulationResultsTask = A.Fake <ISimulationResultsTask>();
_parameterIdentificationTask = A.Fake <IParameterIdentificationTask>();
sut = new ConfigureSimulationTask(_buildingBlockTask, _activeSubjectRetriever, _simulationSettingsRetriever, _applicationController,
_executionContext, _parameterIdUpdater, _simulationResultsTask);
}
protected override void Context()
{
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_executionContext = A.Fake <IExecutionContext>();
_project = A.Fake <PKSimProject>();
_population = A.Fake <RandomPopulation>();
_randomPopulationPresenter = A.Fake <ICreateRandomPopulationPresenter>();
_applicationController = A.Fake <IApplicationController>();
A.CallTo(() => _applicationController.Start <ICreateRandomPopulationPresenter>()).Returns(_randomPopulationPresenter);
A.CallTo(() => _randomPopulationPresenter.BuildingBlock).Returns(_population);
A.CallTo(() => _buildingBlockTask.TypeFor(_population)).Returns("pop");
A.CallTo(() => _executionContext.CurrentProject).Returns(_project);
sut = new PopulationTask(_executionContext, _buildingBlockTask, _applicationController);
}
protected override void Context()
{
_executionContext = A.Fake <IExecutionContext>();
_configureSimulationTask = A.Fake <IConfigureSimulationTask>();
_createSimulationPresenter = A.Fake <ICreateSimulationPresenter>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_simulationBuildingBlockUpdater = A.Fake <ISimulationBuildingBlockUpdater>();
_applicationController = A.Fake <IApplicationController>();
_simulationParametersToBlockUpdater = A.Fake <ISimulationParametersToBuildingBlockUpdater>();
_blockParametersToSimulationUpdater = A.Fake <IBuildingBlockParametersToSimulationUpdater>();
A.CallTo(() => _applicationController.Start <ICreateSimulationPresenter>()).Returns(_createSimulationPresenter);
sut = new SimulationTask(_executionContext, _buildingBlockTask, _applicationController, _simulationBuildingBlockUpdater,
_configureSimulationTask, _blockParametersToSimulationUpdater, _simulationParametersToBlockUpdater);
}
public SimulationExportTask(IBuildingBlockTask buildingBlockTask, IDialogCreator dialogCreator, IDataRepositoryTask dataRepositoryTask,
IQuantityPathToQuantityDisplayPathMapper quantityDisplayPathMapper, IStringSerializer stringSerializer,
IModelReportCreator modelReportCreator, ISimulationToModelCoreSimulationMapper coreSimulationMapper, ISimModelExporter simModelExporter, ISimulationResultsToDataTableConverter simulationResultsToDataTableConverter)
{
_buildingBlockTask = buildingBlockTask;
_dialogCreator = dialogCreator;
_dataRepositoryTask = dataRepositoryTask;
_quantityDisplayPathMapper = quantityDisplayPathMapper;
_stringSerializer = stringSerializer;
_modelReportCreator = modelReportCreator;
_coreSimulationMapper = coreSimulationMapper;
_simModelExporter = simModelExporter;
_simulationResultsToDataTableConverter = simulationResultsToDataTableConverter;
}
protected override void Context()
{
_quantityDisplayPathMapper = A.Fake <IQuantityPathToQuantityDisplayPathMapper>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_dialogCreator = A.Fake <IDialogCreator>();
_dataRepositoryTask = A.Fake <IDataRepositoryTask>();
_stringSerializer = A.Fake <IStringSerializer>();
_modelReportCreator = A.Fake <IModelReportCreator>();
_simulationMapper = A.Fake <ISimulationToModelCoreSimulationMapper>();
_simModelExporter = A.Fake <ISimModelExporter>();
_simulationResultsToDataTableConverter = A.Fake <ISimulationResultsToDataTableConverter>();
sut = new SimulationExportTask(_buildingBlockTask, _dialogCreator, _dataRepositoryTask, _quantityDisplayPathMapper,
_stringSerializer, _modelReportCreator, _simulationMapper, _simModelExporter, _simulationResultsToDataTableConverter);
}
public ReloadRelatedItemTask(IApplicationConfiguration applicationConfiguration, OSPSuite.Core.Journal.IContentLoader contentLoader, IDialogCreator dialogCreator,
IMoBiExportTask moBiExportTask, IRelatedItemSerializer relatedItemSerializer, IObservedDataTask observedDataTask,
IBuildingBlockTask buildingBlockTask, IObjectIdResetter objectIdResetter, IWithIdRepository withIdRepository,
IParameterIdentificationTask parameterIdentificationTask, ISensitivityAnalysisTask sensitivityAnalysisTask) :
base(applicationConfiguration, contentLoader, dialogCreator)
{
_moBiExportTask = moBiExportTask;
_relatedItemSerializer = relatedItemSerializer;
_observedDataTask = observedDataTask;
_buildingBlockTask = buildingBlockTask;
_objectIdResetter = objectIdResetter;
_withIdRepository = withIdRepository;
_parameterIdentificationTask = parameterIdentificationTask;
_sensitivityAnalysisTask = sensitivityAnalysisTask;
}
protected override void Context()
{
_createIndividualPresenter = A.Fake <ICreateIndividualPresenter>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_scaleIndividualPresenter = A.Fake <IScaleIndividualPresenter>();
_executionContext = A.Fake <IExecutionContext>();
_applicationController = A.Fake <IApplicationController>();
A.CallTo(() => _executionContext.CurrentProject).Returns(A.Fake <PKSimProject>());
_individual = A.Fake <Individual>();
A.CallTo(() => _applicationController.Start <ICreateIndividualPresenter>()).Returns(_createIndividualPresenter);
A.CallTo(() => _applicationController.Start <IScaleIndividualPresenter>()).Returns(_scaleIndividualPresenter);
A.CallTo(() => _createIndividualPresenter.BuildingBlock).Returns(_individual);
A.CallTo(() => _buildingBlockTask.TypeFor(_individual)).Returns("Individual");
sut = new IndividualTask(_executionContext, _buildingBlockTask, _applicationController);
}
public TrainingMaterialTask(IBuildingBlockTask buildingBlockTask, IWorkspace workspace, IBatchLogger logger, IBatchToCoreMapper mapper,
ISimulationEngineFactory simulationEngineFactory, ISimulationConstructor simulationConstructor, ISimulationSettingsRetriever simulationSettingsRetriever,
IObservedDataTask observedDataTask, IProjectTask projectTask, IParameterAlternativeFactory parameterAlternativeFactory,
ICompoundAlternativeTask compoundAlternativeTask, ITrainingObservedDataRepository observedDataRepository)
{
_buildingBlockTask = buildingBlockTask;
_workspace = workspace;
_logger = logger;
_mapper = mapper;
_simulationEngineFactory = simulationEngineFactory;
_simulationConstructor = simulationConstructor;
_simulationSettingsRetriever = simulationSettingsRetriever;
_observedDataTask = observedDataTask;
_projectTask = projectTask;
_parameterAlternativeFactory = parameterAlternativeFactory;
_compoundAlternativeTask = compoundAlternativeTask;
_observedDataRepository = observedDataRepository;
}
