public override object Clone()
{
var other = (GESpecies)(base.Clone());
other.GPSpecies = (GPSpecies)(GPSpecies.Clone());
// ERCBank isn't cloned
// ** I think we need to clone it -- khaled
return(other);
}
/**
* This is an ugly hack to simulate the "Sensible Initialization",
* First we create a GPIndividual, then reverse-map it to GEIndividuals,
* We do not need to call IntegerVectorSpecies.newIndividual() since it is overriden
* by the GPSpecies.newIndividual();
*
* Moreover, as in the case for non-identical representations (i,e, GP-GE island
* models etc,), the grammar rules, tree constraints, ERC's etc, are supposed to be
* identical across all islands, so we are using the same "gpspecies" inside this class.
*
* However, the identicality of the GPTree particulars like grammar, constraints, ADFs,
* ERC's may not be universally true.
*/
public override Individual NewIndividual(IEvolutionState state, int thread)
{
GEIndividual gei = null;
if (InitScheme != null && InitScheme.Equals("sensible"))
{
GPIndividual gpi = (GPIndividual)GPSpecies.NewIndividual(state, thread);
gei = ReverseMap(state, gpi, thread);
}
else
{
gei = (GEIndividual)base.NewIndividual(state, thread);
gei.Species = this;
}
return(gei);
}
public override void Setup(IEvolutionState state, IParameter paramBase)
{
base.Setup(state, paramBase);
var def = DefaultBase;
var p = paramBase.Push(P_GPSPECIES);
GPSpecies = (GPSpecies)(state.Parameters.GetInstanceForParameterEq(p, def.Push(P_GPSPECIES), typeof(GPSpecies)));
GPSpecies.Setup(state, p);
// check to make sure that our individual prototype is a GPIndividual
if (!(I_Prototype is IntegerVectorIndividual))
{
state.Output.Fatal("The Individual class for the Species " + GetType().Name + " must be a subclass of ge.GEIndividual.", paramBase);
}
ERCBank = Hashtable.Synchronized(new Hashtable());
// load the grammars, one per ADF tree
var gpi = (GPIndividual)(GPSpecies.I_Prototype);
var trees = gpi.Trees;
var numGrammars = trees.Length;
ParserPrototype = (GrammarParser)state.Parameters.GetInstanceForParameterEq(
paramBase.Push(P_PARSER),
def.Push(P_PARSER),
typeof(GrammarParser));
Grammar = new GrammarRuleNode[numGrammars];
for (var i = 0; i < numGrammars; i++)
{
p = paramBase.Push(P_FILE);
def = DefaultBase;
//var grammarFile = state.Parameters.GetFile(p, def.Push(P_FILE).Push("" + i));
Stream grammarFile = state.Parameters.GetResource(p, def.Push(P_FILE).Push("" + i));
if (grammarFile == null)
{
state.Output.Fatal("Error retrieving grammar file(s): " + def + "." + P_FILE + "." + i + " is undefined.");
}
GPFunctionSet gpfs = trees[i].Constraints((GPInitializer)state.Initializer).FunctionSet;
// now we need different parser object for each of the grammars,
// why? see GrammarParser.java for details -- khaled
GrammarParser[i] = (GrammarParser)ParserPrototype.Clone();
StreamReader reader = new StreamReader(grammarFile);
Grammar[i] = GrammarParser[i].ParseRules(state, reader, gpfs);
// Enumerate the grammar tree -- khaled
GrammarParser[i].EnumerateGrammarTree(Grammar[i]);
// Generate the predictive parse table -- khaled
GrammarParser[i].PopulatePredictiveParseTable(Grammar[i]);
try
{
reader.Close();
}
catch (IOException e)
{
// do nothing
}
}
// get the initialization scheme -- khaled
InitScheme = state.Parameters.GetString(paramBase.Push(P_INITSCHEME), def.Push(P_INITSCHEME));
if (InitScheme != null && InitScheme.Equals("sensible"))
{
state.Output.WarnOnce("Using a \"hacked\" version of \"sensible initialization\"");
}
else
{
state.Output.WarnOnce("Using default GE initialization scheme");
}
// setup the "passes" parameters
int MAXIMUM_PASSES = 1024;
Passes = state.Parameters.GetInt(paramBase.Push(P_PASSES), def.Push(P_PASSES), 1);
if (Passes < 1 || Passes > MAXIMUM_PASSES)
{
state.Output.Fatal("Number of allowed passes must be >= 1 and <="
+ MAXIMUM_PASSES + ", likely small, such as <= 16.",
paramBase.Push(P_PASSES), def.Push(P_PASSES));
}
int oldpasses = Passes;
Passes = NextPowerOfTwo(Passes);
if (oldpasses != Passes)
{
state.Output.Warning("Number of allowed passes must be a power of 2. Bumping from "
+ oldpasses + " to " + Passes, paramBase.Push(P_PASSES), def.Push(P_PASSES));
}
}
