public void InitializeSpectrumSourceFiles(SrmDocument document)
{
if (!IsDDASearch)
{
if (DocLib == null)
{
return;
}
var measuredResults = document.Settings.MeasuredResults;
foreach (var dataFile in DocLib.LibraryFiles.FilePaths)
{
var msDataFilePath = new MsDataFilePath(dataFile);
SpectrumSourceFiles[dataFile] = new FoundResultsFilePossibilities(msDataFilePath.GetFileNameWithoutExtension());
// If a matching file is already in the document, then don't include
// this library spectrum source in the set of files to find.
if (measuredResults != null && measuredResults.FindMatchingMSDataFile(MsDataFileUri.Parse(dataFile)) != null)
{
continue;
}
if (File.Exists(dataFile) && DataSourceUtil.IsDataSource(dataFile))
{
// We've found the dataFile in the exact location
// specified in the document library, so just add it
// to the "FOUND" list.
SpectrumSourceFiles[dataFile].ExactMatch = msDataFilePath.ToString();
}
}
DocLib.ReadStream.CloseStream();
}
}
public void InitializeSpectrumSourceFiles(SrmDocument document)
{
if (DocLib == null)
return;
var measuredResults = document.Settings.MeasuredResults;
foreach (var dataFile in DocLib.LibraryDetails.DataFiles)
{
var msDataFilePath = new MsDataFilePath(dataFile);
SpectrumSourceFiles[dataFile] = new FoundResultsFilePossibilities(msDataFilePath.GetFileNameWithoutExtension());
// If a matching file is already in the document, then don't include
// this library spectrum source in the set of files to find.
if (measuredResults != null && measuredResults.FindMatchingMSDataFile(MsDataFileUri.Parse(dataFile)) != null)
continue;
if (File.Exists(dataFile) && DataSourceUtil.IsDataSource(dataFile))
{
// We've found the dataFile in the exact location
// specified in the document library, so just add it
// to the "FOUND" list.
SpectrumSourceFiles[dataFile].ExactMatch = msDataFilePath.ToString();
}
}
DocLib.ReadStream.CloseStream();
}
