Exemplo n.º 1
0
        //---------------------------------------------------------------------

        public void CohortPartialMortality(object sender, Landis.Library.BiomassCohorts.PartialDeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            Landis.Library.BiomassCohorts.ICohort cohort = eventArgs.Cohort;

            double fractionPartialMortality = (double)eventArgs.Reduction / (double)cohort.Biomass;
            //PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY START: species={0}, age={1}, biomass={2}, fraction_mortality={3:0.00}.", cohort.Species.Name, cohort.Age, cohort.Biomass, fractionPartialMortality);

            int nonWoody = cohort.ComputeNonWoodyBiomass(site);
            int woody    = (cohort.Biomass - nonWoody);

            int foliarInput = (int)((double)nonWoody * fractionPartialMortality);
            int woodInput   = (int)((double)woody * fractionPartialMortality);

            if (disturbanceType.IsMemberOf("disturbance:harvest") || disturbanceType.IsMemberOf("disturbance:fire"))
            {
                AgeOnlyDisturbances.PoolPercentages cohortReductions = AgeOnlyDisturbances.Module.Parameters.CohortReductions[disturbanceType];

                foliarInput = AgeOnlyDisturbances.Events.ReduceInput(foliarInput, cohortReductions.Foliar);
                woodInput   = AgeOnlyDisturbances.Events.ReduceInput(woodInput, cohortReductions.Wood);
            }

            ForestFloor.AddWoody(woodInput, cohort.Species, site);
            ForestFloor.AddLitter(foliarInput, cohort.Species, site);

            //PlugIn.ModelCore.UI.WriteLine("       BIOMASS SUCCESSION PARTIAL MORTALITY SUMMARY: Cohort Partial Mortality: species={0}, age={1}, disturbance={2}.", cohort.Species.Name, cohort.Age, disturbanceType);
            //PlugIn.ModelCore.UI.WriteLine("           InputB/TotalB:  Foliar={0:0.00}/{1:0.00}, Wood={2:0.0}/{3:0.0}.", foliarInput, nonWoody, woodInput, woody);

            return;
        }
Exemplo n.º 2
0
        //---------------------------------------------------------------------
        // This method does not trigger reproduction
        public void CohortPartialMortality(object sender, Landis.Library.BiomassCohorts.PartialDeathEventArgs eventArgs)
        {
            //PlugIn.ModelCore.UI.WriteLine("Cohort Partial Mortality:  {0}", eventArgs.Site);

            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            ICohort cohort = (Landis.Library.LeafBiomassCohorts.ICohort)eventArgs.Cohort;

            float fractionPartialMortality = (float)eventArgs.Reduction;
            float foliarInput = cohort.LeafBiomass * fractionPartialMortality;
            float woodInput   = cohort.WoodBiomass * fractionPartialMortality;

            if (disturbanceType.IsMemberOf("disturbance:harvest"))
            {
                SiteVars.HarvestPrescriptionName = PlugIn.ModelCore.GetSiteVar <string>("Harvest.PrescriptionName");
                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
                }
                woodInput   -= woodInput * (float)HarvestEffects.GetCohortWoodRemoval(site);
                foliarInput -= foliarInput * (float)HarvestEffects.GetCohortLeafRemoval(site);
            }
            if (disturbanceType.IsMemberOf("disturbance:fire"))
            {
                SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");

                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    SiteVars.SmolderConsumption[site] = 0.0;
                    SiteVars.FlamingConsumption[site] = 0.0;
                    if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                    {
                        FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                    }
                }

                double woodFireConsumption   = woodInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].CoarseLitterReduction;
                double foliarFireConsumption = foliarInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].FineLitterReduction;

                SiteVars.SmolderConsumption[site] += woodFireConsumption;
                SiteVars.FlamingConsumption[site] += foliarFireConsumption;
                woodInput   -= (float)woodFireConsumption;
                foliarInput -= (float)foliarFireConsumption;
            }

            ForestFloor.AddWoodLitter(woodInput, cohort.Species, site);
            ForestFloor.AddFoliageLitter(foliarInput, cohort.Species, site);

            Roots.AddCoarseRootLitter(Roots.CalculateCoarseRoot(cohort, cohort.WoodBiomass * fractionPartialMortality), cohort, cohort.Species, site);
            Roots.AddFineRootLitter(Roots.CalculateFineRoot(cohort, cohort.LeafBiomass * fractionPartialMortality), cohort, cohort.Species, site);

            //PlugIn.ModelCore.UI.WriteLine("EVENT: Cohort Partial Mortality: species={0}, age={1}, disturbance={2}.", cohort.Species.Name, cohort.Age, disturbanceType);
            //PlugIn.ModelCore.UI.WriteLine("       Cohort Reductions:  Foliar={0:0.00}.  Wood={1:0.00}.", HarvestEffects.GetCohortLeafRemoval(site), HarvestEffects.GetCohortLeafRemoval(site));
            //PlugIn.ModelCore.UI.WriteLine("       InputB/TotalB:  Foliar={0:0.00}/{1:0.00}, Wood={2:0.0}/{3:0.0}.", foliarInput, cohort.LeafBiomass, woodInput, cohort.WoodBiomass);
            Disturbed[site] = true;

            return;
        }
Exemplo n.º 3
0
        //---------------------------------------------------------------------

        public void CohortPartialMortality(object sender, Landis.Library.BiomassCohorts.PartialDeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            Landis.Library.BiomassCohorts.ICohort cohort = eventArgs.Cohort;

            double fractionPartialMortality = (double)eventArgs.Reduction / (double)cohort.Biomass;
            //PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY START: species={0}, age={1}, biomass={2}, fraction_mortality={3:0.00}.", cohort.Species.Name, cohort.Age, cohort.Biomass, fractionPartialMortality);

            int nonWoody = cohort.ComputeNonWoodyBiomass(site);
            int woody    = (cohort.Biomass - nonWoody);

            float foliarInput = ((float)nonWoody * (float)fractionPartialMortality);
            float woodInput   = ((float)woody * (float)fractionPartialMortality);

            if (disturbanceType.IsMemberOf("disturbance:harvest"))
            {
                SiteVars.HarvestPrescriptionName = PlugIn.ModelCore.GetSiteVar <string>("Harvest.PrescriptionName");
                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
                }
                woodInput   -= woodInput * (float)HarvestEffects.GetCohortWoodRemoval(site);
                foliarInput -= foliarInput * (float)HarvestEffects.GetCohortLeafRemoval(site);
            }
            if (disturbanceType.IsMemberOf("disturbance:fire"))
            {
                SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");

                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                    {
                        FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                    }
                }

                double woodFireConsumption   = woodInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].CoarseLitterReduction;
                double foliarFireConsumption = foliarInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].FineLitterReduction;

                woodInput   -= (float)woodFireConsumption;
                foliarInput -= (float)foliarFireConsumption;
            }

            ForestFloor.AddWoody(woodInput, cohort.Species, site);
            ForestFloor.AddLitter(foliarInput, cohort.Species, site);

            //PlugIn.ModelCore.UI.WriteLine("       BIOMASS SUCCESSION PARTIAL MORTALITY SUMMARY: Cohort Partial Mortality: species={0}, age={1}, disturbance={2}.", cohort.Species.Name, cohort.Age, disturbanceType);
            //PlugIn.ModelCore.UI.WriteLine("           InputB/TotalB:  Foliar={0:0.00}/{1:0.00}, Wood={2:0.0}/{3:0.0}.", foliarInput, nonWoody, woodInput, woody);

            return;
        }
Exemplo n.º 4
0
        //---------------------------------------------------------------------

        public void CohortDied(object sender,
                               Landis.Library.BiomassCohorts.DeathEventArgs eventArgs)
        {
            //PlugIn.ModelCore.UI.WriteLine("Cohort Died! :-(");

            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            ICohort cohort = (Landis.Library.LeafBiomassCohorts.ICohort)eventArgs.Cohort;
            double  foliar = (double)cohort.LeafBiomass;

            double wood = (double)cohort.WoodBiomass;

            if (disturbanceType == null)
            {
                ForestFloor.AddWoodLitter(wood, cohort.Species, eventArgs.Site);
                ForestFloor.AddFoliageLitter(foliar, cohort.Species, eventArgs.Site);

                Roots.AddCoarseRootLitter(wood, cohort, cohort.Species, eventArgs.Site);
                Roots.AddFineRootLitter(foliar, cohort, cohort.Species, eventArgs.Site);
            }

            if (disturbanceType != null)
            {
                Disturbed[site] = true;
                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    Landis.Library.Succession.Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);
                }
                else
                {
                    Landis.Library.Succession.Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }
        }
Exemplo n.º 5
0
        //---------------------------------------------------------------------
        // Outmoded but required?

        public static void SiteDisturbed(object sender,
                                         Landis.Library.BiomassCohorts.DisturbanceEventArgs eventArgs)
        {
            PlugIn.ModelCore.UI.WriteLine("  Calculating Fire or Harvest Effects.");

            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            if (disturbanceType.IsMemberOf("disturbance:fire"))
            {
                SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");
                if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                {
                    FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                }
            }
            if (disturbanceType.IsMemberOf("disturbance:harvest"))
            {
                HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
            }
        }
Exemplo n.º 6
0
        //---------------------------------------------------------------------
        public void DeathEvent(object sender, Landis.Library.PnETCohorts.DeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;

            if (disturbanceType != null)
            {
                ActiveSite site = eventArgs.Site;
                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);
                }
                else
                {
                    Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }
        }
        public static void CohortDied(object sender,
                                      DeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            //PoolPercentages cohortReductions = Module.Parameters.CohortReductions[disturbanceType];

            ICohort    cohort = eventArgs.Cohort;
            ActiveSite site   = eventArgs.Site;

            if (disturbanceType.IsMemberOf("disturbance:harvest"))      //base harvest doesn't get here ever, but biomass harvest does.
            {
                return;                                                 //It has already been accounted for, however in PlugIn.CohortDied, so don't repeat here.
            }
            double foliar = (double)cohort.ComputeNonWoodyBiomass(site);
            double wood   = ((double)cohort.Biomass - foliar);

            SiteVars.soilClass[site].DisturbanceImpactsBiomass(site, cohort.Species, cohort.Age, wood, foliar, disturbanceType.Name, 0);
        }
Exemplo n.º 8
0
        public void CohortDied(object sender,
                               DeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;

            if (disturbanceType != null)
            {
                ActiveSite site = eventArgs.Site;
                Disturbed[site] = true;
                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);
                }
                else
                {
                    Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }
        }
        //---------------------------------------------------------------------

        public void CohortDied(object sender,
                               DeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;

            if (disturbanceType != null)
            {
                ActiveSite site = eventArgs.Site;
                Disturbed[site] = true;
                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    Landis.Library.Succession.Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);
                }
                else
                {
                    Landis.Library.Succession.Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }

            //modelCore.Log.WriteLine("   Cohort DIED:  {0}:{1}.", eventArgs.Cohort.Species.Name, eventArgs.Cohort.Age);
        }
Exemplo n.º 10
0
        //---------------------------------------------------------------------
        // Total mortality, including from disturbance or senescence.

        public void CohortTotalMortality(object sender, Landis.Library.BiomassCohorts.DeathEventArgs eventArgs)
        {
            //PlugIn.ModelCore.UI.WriteLine("Cohort Total Mortality: {0}", eventArgs.Site);

            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            ICohort cohort      = (Landis.Library.LeafBiomassCohorts.ICohort)eventArgs.Cohort;
            double  foliarInput = (double)cohort.LeafBiomass;
            double  woodInput   = (double)cohort.WoodBiomass;

            if (disturbanceType != null)
            {
                //PlugIn.ModelCore.UI.WriteLine("DISTURBANCE EVENT: Cohort Died: species={0}, age={1}, disturbance={2}.", cohort.Species.Name, cohort.Age, eventArgs.DisturbanceType);

                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");
                    Landis.Library.Succession.Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);

                    if (!Disturbed[site])  // the first cohort killed/damaged
                    {
                        SiteVars.SmolderConsumption[site] = 0.0;
                        SiteVars.FlamingConsumption[site] = 0.0;
                        if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                        {
                            FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                        }
                    }

                    double woodFireConsumption   = woodInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].CoarseLitterReduction;
                    double foliarFireConsumption = foliarInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].FineLitterReduction;

                    SiteVars.SmolderConsumption[site] += woodFireConsumption;
                    SiteVars.FlamingConsumption[site] += foliarFireConsumption;
                    woodInput   -= (float)woodFireConsumption;
                    foliarInput -= (float)foliarFireConsumption;
                }
                else
                {
                    if (disturbanceType.IsMemberOf("disturbance:harvest"))
                    {
                        SiteVars.HarvestPrescriptionName = PlugIn.ModelCore.GetSiteVar <string>("Harvest.PrescriptionName");
                        if (!Disturbed[site])  // the first cohort killed/damaged
                        {
                            HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
                        }
                        woodInput   -= woodInput * (float)HarvestEffects.GetCohortWoodRemoval(site);
                        foliarInput -= foliarInput * (float)HarvestEffects.GetCohortLeafRemoval(site);
                    }

                    // If not fire, check for resprouting:
                    Landis.Library.Succession.Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }

            //PlugIn.ModelCore.UI.WriteLine("Cohort Died: species={0}, age={1}, wood={2:0.00}, foliage={3:0.00}.", cohort.Species.Name, cohort.Age, wood, foliar);
            ForestFloor.AddWoodLitter(woodInput, cohort.Species, eventArgs.Site);
            ForestFloor.AddFoliageLitter(foliarInput, cohort.Species, eventArgs.Site);

            // Assume that ALL dead root biomass stays on site.
            Roots.AddCoarseRootLitter(Roots.CalculateCoarseRoot(cohort, cohort.WoodBiomass), cohort, cohort.Species, eventArgs.Site);
            Roots.AddFineRootLitter(Roots.CalculateFineRoot(cohort, cohort.LeafBiomass), cohort, cohort.Species, eventArgs.Site);

            if (disturbanceType != null)
            {
                Disturbed[site] = true;
            }

            return;
        }
        public void CohortTotalMortality(object sender, DeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            ICohort cohort      = (Landis.Library.BiomassCohorts.ICohort)eventArgs.Cohort;
            int     foliarInput = cohort.ComputeNonWoodyBiomass(site);
            int     woodInput   = (cohort.Biomass - foliarInput);

            if (disturbanceType != null)
            {
                if (PlugIn.CalibrateMode && PlugIn.ModelCore.CurrentTime > 0)
                {
                    PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION TOTAL MORTALITY: species={0}, age={1}, woodInput={2}, foliarInputs={3}.", cohort.Species.Name, cohort.Age, woodInput, foliarInput);
                }

                if (disturbanceType.IsMemberOf("disturbance:fire"))
                {
                    SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");
                    Landis.Library.Succession.Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);

                    if (!Disturbed[site])  // the first cohort killed/damaged
                    {
                        if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                        {
                            FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                        }
                    }

                    double woodFireConsumption   = woodInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].CoarseLitterReduction;
                    double foliarFireConsumption = foliarInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].FineLitterReduction;

                    woodInput   -= (int)woodFireConsumption;
                    foliarInput -= (int)foliarFireConsumption;
                }
                else
                {
                    if (disturbanceType.IsMemberOf("disturbance:harvest"))
                    {
                        SiteVars.HarvestPrescriptionName = PlugIn.ModelCore.GetSiteVar <string>("Harvest.PrescriptionName");
                        if (!Disturbed[site])  // the first cohort killed/damaged
                        {
                            HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
                        }
                        woodInput   -= (int)(woodInput * (float)HarvestEffects.GetCohortWoodRemoval(site));
                        foliarInput -= (int)(foliarInput * (float)HarvestEffects.GetCohortLeafRemoval(site));
                    }

                    // If not fire, check for resprouting:
                    Landis.Library.Succession.Reproduction.CheckForResprouting(eventArgs.Cohort, site);
                }
            }

            //PlugIn.ModelCore.UI.WriteLine("Cohort Died: species={0}, age={1}, wood={2:0.00}, foliage={3:0.00}.", cohort.Species.Name, cohort.Age, wood, foliar);
            ForestFloor.AddWoody(woodInput, cohort.Species, eventArgs.Site);
            ForestFloor.AddLitter(foliarInput, cohort.Species, eventArgs.Site);

            // Assume that ALL dead root biomass stays on site.
            //Roots.AddCoarseRootLitter(Roots.CalculateCoarseRoot(cohort, cohort.WoodBiomass), cohort, cohort.Species, eventArgs.Site);
            //Roots.AddFineRootLitter(Roots.CalculateFineRoot(cohort, cohort.LeafBiomass), cohort, cohort.Species, eventArgs.Site);

            if (disturbanceType != null)
            {
                Disturbed[site] = true;
            }

            return;

            //ExtensionType disturbanceType = eventArgs.DisturbanceType;
            //if (disturbanceType != null)
            //{
            //    ActiveSite site = eventArgs.Site;
            //    Disturbed[site] = true;
            //    if (disturbanceType.IsMemberOf("disturbance:fire"))
            //        Reproduction.CheckForPostFireRegen(eventArgs.Cohort, site);
            //    else
            //        Reproduction.CheckForResprouting(eventArgs.Cohort, site);
            //}
        }
        //---------------------------------------------------------------------

        public void CohortPartialMortality(object sender, Landis.Library.BiomassCohorts.PartialDeathEventArgs eventArgs)
        {
            ExtensionType disturbanceType = eventArgs.DisturbanceType;
            ActiveSite    site            = eventArgs.Site;

            Landis.Library.BiomassCohorts.ICohort cohort = eventArgs.Cohort;

            double partialMortality = (double)eventArgs.Reduction;

            if (PlugIn.CalibrateMode && PlugIn.ModelCore.CurrentTime > 0)
            {
                PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY I: species={0}, age={1}, disturbance={2}.", cohort.Species.Name, cohort.Age, disturbanceType);
                PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY I: eventReduction={0:0.0}, new_cohort_biomass={1}.", eventArgs.Reduction, cohort.Biomass);
            }
            double nonWoodyFraction = (double)cohort.ComputeNonWoodyBiomass(site) / (double)cohort.Biomass;
            double woodyFraction    = 1.0 - nonWoodyFraction;

            float foliarInput = (float)(partialMortality * nonWoodyFraction); // ((float) nonWoody * (float) fractionPartialMortality);
            float woodInput   = (float)(partialMortality * woodyFraction);    // ((float) woody * (float) fractionPartialMortality);

            if (PlugIn.CalibrateMode && PlugIn.ModelCore.CurrentTime > 0)
            {
                PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY II: species={0}, age={1}, woodInput={2}, foliarInputs={3}.", cohort.Species.Name, cohort.Age, woodInput, foliarInput);
            }


            if (disturbanceType.IsMemberOf("disturbance:harvest"))
            {
                SiteVars.HarvestPrescriptionName = PlugIn.ModelCore.GetSiteVar <string>("Harvest.PrescriptionName");
                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    HarvestEffects.ReduceLayers(SiteVars.HarvestPrescriptionName[site], site);
                }
                woodInput   -= woodInput * (float)HarvestEffects.GetCohortWoodRemoval(site);
                foliarInput -= foliarInput * (float)HarvestEffects.GetCohortLeafRemoval(site);
            }
            //PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY: species={0}, age={1}, woodInput={2}, foliarInputs={3}.", cohort.Species.Name, cohort.Age, woodInput, foliarInput);
            if (disturbanceType.IsMemberOf("disturbance:fire"))
            {
                SiteVars.FireSeverity = PlugIn.ModelCore.GetSiteVar <byte>("Fire.Severity");

                if (!Disturbed[site]) // this is the first cohort killed/damaged
                {
                    if (SiteVars.FireSeverity != null && SiteVars.FireSeverity[site] > 0)
                    {
                        FireEffects.ReduceLayers(SiteVars.FireSeverity[site], site);
                    }
                }

                double woodFireConsumption   = woodInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].CoarseLitterReduction;
                double foliarFireConsumption = foliarInput * (float)FireEffects.ReductionsTable[(int)SiteVars.FireSeverity[site]].FineLitterReduction;

                woodInput   -= (float)woodFireConsumption;
                foliarInput -= (float)foliarFireConsumption;
            }

            if (PlugIn.CalibrateMode && PlugIn.ModelCore.CurrentTime > 0)
            {
                PlugIn.ModelCore.UI.WriteLine("   BIOMASS SUCCESSION PARTIAL MORTALITY III: ForestFloorInputs: Foliar={0:0.00}, Wood={1:0.0}.", foliarInput, woodInput);
            }

            ForestFloor.AddWoody(woodInput, cohort.Species, site);
            ForestFloor.AddLitter(foliarInput, cohort.Species, site);

            if (disturbanceType != null)
            {
                Disturbed[site] = true;
            }


            return;
        }