protected override void Context()
{
base.Context();
_eventGroupBuildingBlock = new EventGroupBuildingBlock().WithName("Tada");
_eventGroupBuildingBlock.Add(new ApplicationBuilder().WithName("App1"));
_eventGroupBuildingBlock.Add(new ApplicationBuilder().WithName("App2"));
_eventGroupBuildingBlock.Add(new EventGroupBuilder().WithName("EG1"));
_allNames = _eventGroupBuildingBlock.Select(x => x.Name).ToArray();
A.CallTo(() => _interactionTaskContext.Active <IEventGroupBuildingBlock>()).Returns(_eventGroupBuildingBlock);
}
protected override void Context()
{
base.Context();
var observerBuildingBlock1 = new EventGroupBuildingBlock().WithName("Tada");
IEventGroupBuilder observerBuilderA = new ApplicationBuilder().WithName("EGA");
var observerBuilderB = new ApplicationBuilder().WithName("EGB");
observerBuildingBlock1.Add(observerBuilderA);
observerBuildingBlock1.Add(observerBuilderB);
var observerBuildingBlock2 = new EventGroupBuildingBlock().WithName("Tada");
observerBuilderA = new EventGroupBuilder().WithName("EGA");
observerBuilderB = new ApplicationBuilder().WithName("EGB");
observerBuildingBlock2.Add(observerBuilderA);
observerBuildingBlock2.Add(observerBuilderB);
_object1 = observerBuildingBlock1;
_object2 = observerBuildingBlock2;
}
public void TestComplexEventGroupBB()
{
EventGroupBuildingBlock x1 = _buildConfiguration.EventGroups as EventGroupBuildingBlock;
Assert.IsNotNull(x1);
ApplicationBuilder a1 = CreateObject <ApplicationBuilder>().WithName("App.Builder");
x1.Add(a1);
var applicationMoleculeBuilder = CreateObject <ApplicationMoleculeBuilder>().WithName("AppMolecule");
IFormula f2 = CreateObject <ConstantFormula>().WithDimension(DimensionLength).WithValue(3.4);
applicationMoleculeBuilder.Formula = f2;
applicationMoleculeBuilder.RelativeContainerPath = new ObjectPath(new[] { "A", "B" });
a1.AddMolecule(applicationMoleculeBuilder);
IEventGroupBuildingBlock x2 = SerializeAndDeserialize(x1);
AssertForSpecs.AreEqualBuildingBlock(x2, x1);
}
/// <summary>
/// Creates a EventGroupBuildingBlock and a EventGroupBuilder.
/// </summary>
internal void CreateEGBandEGBB()
{
EventGroupBuilder = new EventGroupBuilder()
.WithName(SBMLConstants.SBML_EVENTS)
.WithId(SBMLConstants.SBML_EVENTS);
var eventsContainer = GetEventsTopContainer();
if (eventsContainer != null)
{
var matchTag = new MatchTagCondition(eventsContainer.Name);
EventGroupBuilder.SourceCriteria.Add(matchTag);
}
EventGroupBuildingBlock = new EventGroupBuildingBlock()
.WithName(SBMLConstants.SBML_EVENT_BB)
.WithId(SBMLConstants.SBML_EVENT_BB);
EventGroupBuildingBlock.Add(EventGroupBuilder);
}
protected override void Context()
{
base.Context();
_project = new MoBiProject();
var molecule = new MoleculeBuilder().WithName(_moleculeName);
var moleculeParameter = new Parameter().WithName(_moleculeParameterName);
molecule.Add(moleculeParameter);
var molecules = new MoleculeBuildingBlock()
{
molecule
};
_project.AddBuildingBlock(molecules);
var parameter = new Parameter().WithName(_parameterName);
var root = new Container().WithName(_topContainerName);
root.Add(parameter);
var spatialStructure = new MoBiSpatialStructure().WithTopContainer(root);
spatialStructure.GlobalMoleculeDependentProperties = new Container().WithName(Constants.MOLECULE_PROPERTIES);
spatialStructure.NeighborhoodsContainer = new Container().WithName(Constants.NEIGHBORHOODS);
_project.AddBuildingBlock(spatialStructure);
var reactionBuilder = new ReactionBuilder().WithName(_reactionName);
var reactions = new MoBiReactionBuildingBlock()
{
reactionBuilder
};
_project.AddBuildingBlock(reactions);
_project.AddSimulation(new MoBiSimulation().WithName(_simulationName));
var eventGroupBuilder = new EventGroupBuilder().WithName(_eventGroupName);
var eventGroupBuildingBlock = new EventGroupBuildingBlock();
eventGroupBuildingBlock.Add(eventGroupBuilder);
_project.AddBuildingBlock(eventGroupBuildingBlock);
A.CallTo(() => _context.CurrentProject).Returns(_project);
}