private static void HandleFinding(Dictionary <string, List <MeasurementGroup> > findings, DicomContentItem finding)
{
string sitename = "";
foreach (var site in finding.Children())
{
if (site.Type != DicomValueType.Container)
{
sitename = site.Dataset.GetCodeItem(DicomTag.ConceptCodeSequence).Meaning;
//Debug.WriteLine(sitename);
}
else
{
var measurements = new List <Measurement>();
foreach (var rawmeasurement in site.Children())
{
Measurement measurement = GetMeasurementFromRaw(rawmeasurement);
measurements.Add(measurement);
//measurement.PrintDebug();
}
if (findings.ContainsKey(sitename))
{
findings[sitename].AddRange(MeasurementGroup.GroupMeasurements(measurements));
}
else
{
findings.Add(sitename, MeasurementGroup.GroupMeasurements(measurements));
}
}
}
}
public void Children_NodeWithoutChildren_Success()
{
var contentItem = new DicomContentItem(new DicomCodeItem("113820", "DCM", "CT Acquisition Type"),
DicomRelationship.Contains,
new DicomCodeItem("113805", "DCM", "Constant Angle Acquisition"));
Assert.Equal(0, contentItem.Children().Count());
}
public void Children_NodeWithoutChildren_Success()
{
var contentItem = new DicomContentItem(new DicomCodeItem("113820", "DCM", "CT Acquisition Type"),
DicomRelationship.Contains,
new DicomCodeItem("113805", "DCM", "Constant Angle Acquisition"));
Assert.Empty(contentItem.Children());
}
private void AddTreeNode(DicomContentItem item, TreeNode parent)
{
var node = parent.Nodes.Add(item.ToString());
foreach (var child in item.Children())
{
AddTreeNode(child, node);
}
}
public void Children_NodeWithChildren_Success()
{
var contentItem = new DicomContentItem(
new DicomCodeItem("113820", "DCM", "CT Acquisition Type"),
DicomRelationship.Contains,
new DicomCodeItem("113805", "DCM", "Constant Angle Acquisition"));
contentItem.Add(new DicomCodeItem("113961", "DCM", "Reconstruction Algorithm"),
DicomRelationship.Contains, new DicomCodeItem("113962", "DCM", "Filtered Back Projection"));
var children = contentItem.Children().ToList();
Assert.Equal(1, children.Count);
Assert.Equal(new DicomCodeItem("113961", "DCM", null), children[0].Code);
Assert.Equal(DicomRelationship.Contains, children[0].Relationship);
Assert.Equal(new DicomCodeItem("113962", "DCM", null), children[0].Get<DicomCodeItem>());
}
public void Children_NodeWithChildren_Success()
{
var contentItem = new DicomContentItem(
new DicomCodeItem("113820", "DCM", "CT Acquisition Type"),
DicomRelationship.Contains,
new DicomCodeItem("113805", "DCM", "Constant Angle Acquisition"));
contentItem.Add(new DicomCodeItem("113961", "DCM", "Reconstruction Algorithm"),
DicomRelationship.Contains, new DicomCodeItem("113962", "DCM", "Filtered Back Projection"));
var children = contentItem.Children().ToList();
Assert.Single(children);
Assert.Equal(new DicomCodeItem("113961", "DCM", null), children[0].Code);
Assert.Equal(DicomRelationship.Contains, children[0].Relationship);
Assert.Equal(new DicomCodeItem("113962", "DCM", null), children[0].Get <DicomCodeItem>());
}
private static Measurement GetMeasurementFromRaw(DicomContentItem raw)
{
DicomMeasuredValue measurementsequence = raw.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
IMeasurementHeader m = HeaderFactory.Parse(raw.Code.Meaning, (double)measurementsequence.Value, measurementsequence.Code.Meaning, measurementsequence.Code.Value);
Measurement measurement = new Measurement(m);
foreach (var child in raw.Children())
{
string name;
string value;
if (child.Relationship == DicomRelationship.HasConceptModifier || child.Relationship == DicomRelationship.HasProperties)
{
if (!child.Code.Value.Equals("T5203-01"))
{
name = child.Code.Meaning;
value = child.Dataset.GetDicomItem <DicomSequence>(DicomTag.ConceptCodeSequence).Items[0].GetString(DicomTag.CodeMeaning);
measurement.AddProperty(name, value);
}
}
}
return(measurement);
}
public PatientData(DicomContentItem patientcontainer) : this()
{
foreach (var child in patientcontainer.Children())
{
DicomMeasuredValue measurementsequence;
IMeasurementHeader temp;
//Debug.WriteLine(child.Code + ": " + child.Get<string>());
switch (child.Code.Value)
{
case "121033":
measurementsequence = child.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
try {
temp = HeaderFactory.Parse("Age", (double)measurementsequence.Value, measurementsequence.Code.Meaning, measurementsequence.Code.Value);
SupportedUnitsHelpers.Convert(temp, DurationUnit.Year365);
}
catch (Exception) {
temp = new UnitHeaderAdapter("Age", new Duration((double)measurementsequence.Value, DurationUnit.Year365));
}
Debug.WriteLine(temp);
PatientAge = new Result(temp);
break;
case "121032":
PatientSex = new StringResult("Sex", child.Dataset.GetCodeItem(DicomTag.ConceptCodeSequence).Meaning);
Debug.WriteLine(PatientSex);
break;
case "8302-2":
measurementsequence = child.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
temp = HeaderFactory.Parse("Height", (double)measurementsequence.Value, measurementsequence.Code.Meaning, measurementsequence.Code.Value);
SupportedUnitsHelpers.Convert(temp, LengthUnit.Centimeter);
Debug.WriteLine(temp);
PatientHeight = new Result(temp);
break;
case "29463-7":
measurementsequence = child.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
temp = HeaderFactory.Parse("Weight", (double)measurementsequence.Value, measurementsequence.Code.Meaning, measurementsequence.Code.Value);
SupportedUnitsHelpers.Convert(temp, MassUnit.Kilogram);
Debug.WriteLine(temp);
PatientWeight = new Result(temp);
break;
case "F-008EC":
measurementsequence = child.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
temp = HeaderFactory.Parse(child.Code.Meaning, (double)measurementsequence.Value, measurementsequence.Code.Meaning, "mmHg");
Debug.WriteLine(temp);
SystolicBloodPressure = new Result(temp);
break;
case "F-008ED":
measurementsequence = child.Dataset.GetMeasuredValue(DicomTag.MeasuredValueSequence);
temp = HeaderFactory.Parse(child.Code.Meaning, (double)measurementsequence.Value, measurementsequence.Code.Meaning, "mmHg");
Debug.WriteLine(temp);
DiastolicBloodPressure = new Result(temp);
break;
case "121029":
PatientName = new StringResult("Patient Name", child.Get <string>().Replace('^', ' ').Trim());
PatientName.Value = PatientName.Value.Split(' ').Reverse().Aggregate((x, y) => { return((x + " " + y).Trim()); });
Debug.WriteLine(PatientName);
break;
case "121030":
PatientID = new StringResult("Patient ID", child.Get <string>());
Debug.WriteLine(PatientID);
break;
case "T9910-08":
ReferringPhysician = new StringResult("Referring Physician", child.Get <string>());
Debug.WriteLine(ReferringPhysician);
break;
case "T9910-04":
ReasonForStudy = new StringResult("Reason For Study", child.Get <string>());
Debug.WriteLine(ReasonForStudy);
break;
case "121031":
string input = child.Get <string>();
Debug.WriteLine("dob input: " + input);
var numbers = Regex.Split(input, @"\D+").ToList().GetRange(1, 3).Select(x => int.Parse(x)).ToArray();
PatientDOB = new StringResult("DOB", new DateTime(numbers[0], numbers[1], numbers[2]).Date.ToShortDateString());
Debug.WriteLine(PatientDOB.Value);
break;
case "T9910-09":
string dateinput = child.Get <string>();
Debug.WriteLine("exam date input: " + dateinput);
var numbers2 = Regex.Split(dateinput, @"\D+").ToList().GetRange(1, 3).Select(x => int.Parse(x)).ToArray();
StudyDate = new StringResult("Study Date", new DateTime(numbers2[0], numbers2[1], numbers2[2]).Date.ToShortDateString());
Debug.WriteLine(StudyDate.Value);
break;
default:
break;
}
}
UpdateBSAResult();
Debug.WriteLine(PatientDOB.Value);
}
private void AddTreeNode(DicomContentItem item, TreeNode parent)
{
var node = parent.Nodes.Add(item.ToString());
foreach (var child in item.Children()) AddTreeNode(child, node);
}