/// <summary>
/// Click function to open an external web site when clicking on a CID in a SmallWorld database display
/// </summary>
/// <param name="args"></param>
public static void OpenUrlFromSmallWorldCid(
string cid)
{
string[] px = { "PBCHM", "PDB" };
RootTable rt = CompoundId.GetRootTableFromCid(cid);
if (rt == null || Lex.IsUndefined(rt.CidUrl))
{
if (rt != null && Lex.Contains(rt.MetaTableName, MetaTable.PrimaryRootTable))
{
RelatedCompoundsDialog.Show(cid);
return;
}
MessageBoxMx.ShowError("Unable to determine url link for compound Id: " + cid);
return;
}
string url = rt.CidUrl;
foreach (string p in px) // remove unwanted URLs
{
if (Lex.StartsWith(cid, p))
{
cid = cid.Substring(p.Length);
}
}
url = Lex.Replace(url, "[CID]", cid);
SystemUtil.StartProcess(url);
return;
}
/// <summary>
/// Handle UI operations during tick of timer
/// </summary>
/// <param name="sender"></param>
/// <param name="e"></param>
private void Timer_Tick(object sender, EventArgs e)
{
if (ServiceFacade.ServiceFacade.InServiceCall)
{
return; // avoid multiplexing service calls that could cause problems
}
if (InTimer_Tick)
{
return;
}
InTimer_Tick = true;
try
{
string txt = CompoundIdControl.Text;
if (txt == PreviousInput)
{
return;
}
if (DateTime.Now.Subtract(LastCompoundIdControlKeyDownTime).TotalSeconds < .5)
{ // wait for a pause in typing before doing retrieve
//SystemUtil.Beep(); // debug
return;
}
PreviousInput = txt;
MetaTable mt = CompoundId.GetRootMetaTableFromCid(txt);
string cid = CompoundId.Normalize(txt, mt);
string mtName = mt.Name;
MoleculeMx queryStruct = MoleculeUtil.SelectMoleculeForCid(cid, mt);
RSM.StartSearchAndRetrievalOfRelatedStructures(mtName, cid, queryStruct, StructureSearchTypes);
//Text = "Structures related to " + txt; // set form header
InSetup = true; // set structure without triggering another search
RelatedStructuresControl.MoleculeControl.Molecule = queryStruct;
InSetup = false;
}
catch (Exception ex) { ex = ex; }
finally { InTimer_Tick = false; }
#if false // code to handle either CID or structure input
bool userDefinedStructure = Lex.Eq(CurrentInput, "User Defined");
string mtName = "";
if (!userDefinedStructure)
{
CidMt = CompoundId.GetRootTableFromCid(CurrentInput);
mtName = CidMt.Name;
Cid = CompoundId.Normalize(CurrentInput, CidMt);
QueryStruct = MoleculeUtil.SelectChemicalStructureFromCid(Cid, CidMt);
InSetup = true;
Text = "Structures related to " + CurrentInput;
ChemicalStructure.SetRendererStructure(SQuery, QueryStruct);
InSetup = false;
}
else // structure directly entered
{
if (!StructureChanged)
{
InTimer_Tick = false;
return;
}
Cid = SearchId.ToString();
CidMt = null;
mtName = "UserDefined";
QueryStruct = new ChemicalStructure(StructureFormat.MolFile, SQuery.MolfileString);
StructureChanged = false;
}
#endif
}