public void test_L3_Compartment_size()
{
double size = 0.2;
assertEquals(false, C.isSetSize());
assertEquals(true, isnan(C.getSize()));
C.setSize(size);
assertTrue(C.getSize() == size);
assertEquals(true, C.isSetSize());
C.unsetSize();
assertEquals(false, C.isSetSize());
assertEquals(true, isnan(C.getSize()));
}
public void test_L3_Compartment_initDefaults()
{
Compartment c = new Compartment(3, 1);
c.setId("A");
assertEquals(true, c.isSetId());
assertEquals(false, c.isSetName());
assertEquals(false, c.isSetSize());
assertEquals(false, c.isSetVolume());
assertEquals(false, c.isSetUnits());
assertEquals(false, c.isSetConstant());
assertEquals(false, c.isSetSpatialDimensions());
c.initDefaults();
assertTrue(("A" == c.getId()));
assertTrue(c.getName() == "");
assertTrue(("litre" == c.getUnits()));
assertTrue(c.getSpatialDimensions() == 3);
assertTrue(c.getSize() == 1);
assertTrue(c.getConstant() == true);
assertEquals(true, c.isSetId());
assertEquals(false, c.isSetName());
assertEquals(false, c.isSetSize());
assertEquals(false, c.isSetVolume());
assertEquals(true, c.isSetUnits());
assertEquals(true, c.isSetConstant());
assertEquals(true, c.isSetSpatialDimensions());
c = null;
}
public void test_Compartment_unsetSize()
{
C.setSize(0.2);
assertTrue(C.getSize() == 0.2);
assertEquals(true, C.isSetSize());
C.unsetSize();
assertEquals(false, C.isSetSize());
}
public void test_Compartment_setSize1()
{
int i = C.setSize(2.0);
assertTrue(i == libsbml.LIBSBML_OPERATION_SUCCESS);
assertTrue(C.getSize() == 2.0);
i = C.unsetSize();
assertTrue(i == libsbml.LIBSBML_OPERATION_SUCCESS);
}
public void test_Compartment_setSize2()
{
Compartment c = new Compartment(2, 2);
int i = c.setSize(4);
assertTrue(i == libsbml.LIBSBML_OPERATION_SUCCESS);
assertTrue(c.getSize() == 4);
assertEquals(true, c.isSetSize());
i = c.unsetSize();
assertTrue(i == libsbml.LIBSBML_OPERATION_SUCCESS);
assertEquals(false, c.isSetSize());
c = null;
}
/// <summary>
/// Creates a Volume Parameter for a MoBi Container.
/// </summary>
private IEntity CreateVolumeParameter(Compartment compartment)
{
var volume = 1.0;
if (compartment.isSetVolume())
{
volume = compartment.getVolume();
}
else if (compartment.isSetSize())
{
volume = compartment.getSize();
}
var unit = compartment.getUnits();
var baseValue = _unitDefinitionImporter.ToMobiBaseUnit(unit, volume);
IFormula formula = _formulaFactory.ConstantFormula(baseValue.value, baseValue.dimension);
var volumeParameter = _objectBaseFactory.Create <IParameter>()
.WithName(SBMLConstants.VOLUME)
.WithDimension(baseValue.dimension)
.WithFormula(formula);
return(volumeParameter);
}
/// <summary>
/// Creates a container's size parameter to import the size of the particular SBML compartment.
/// </summary>
private IParameter CreateSizeParameter(Compartment compartment)
{
IFormula formula = ObjectBaseFactory.Create <ConstantFormula>().WithValue(compartment.getSize());
var sizeParameter = _objectBaseFactory.Create <IParameter>()
.WithName(SBMLConstants.SIZE)
.WithDescription(SBMLConstants.SBML_SIZE_DESCRIPTION)
.WithFormula(formula);
return(SetDimension(compartment, sizeParameter));
}
