/// <summary>
///
/// </summary>
/// <param name="context"></param>
/// <param name="bookmark"></param>
/// <param name="obj"></param>
protected override void OnBookmarkCallback(NativeActivityContext context, Bookmark bookmark, string obj)
{
var method = System.Reflection.MethodBase.GetCurrentMethod().Name;
Debug.Assert(bookmark.Name == BookmarkName);
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Enter: Finished Processing UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), bookmark.Name));
var registrationType = SpatialRegistrationObjectType.Get(context);
if (registrationType.Equals("2D"))
{
IList <int> imageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIds(Int32.Parse(UnitId.Get(context)), VerificationImageSopInstanceValues.Get(context), ref imageIds);
foreach (int image_id in imageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Found Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), image_id.ToString()));
}
if (imageIds.Count == 0)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing UnitId: [{1}], Image Id list was not set correctly", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
VerificationImageIds.Set(context, imageIds);
OutUnitId.Set(context, UnitId.Get(context));
ActivityStatus.Set(context, "SUCCESS");
}
else if (registrationType.Equals("3D"))
{
IList <int> imageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)), VerificationImageSopInstanceValues.Get(context), ref imageIds);
foreach (int image_id in imageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Found Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), image_id.ToString()));
}
if (imageIds.Count == 0)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing UnitId: [{1}], Image Id list was not set correctly", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
VerificationImageIds.Set(context, imageIds);
OutUnitId.Set(context, UnitId.Get(context));
}
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Exit: Finished Processing UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), bookmark.Name));
}
/// <summary> </summary>
/// <param name="context"></param>
protected override void DoWork(CodeActivityContext context)
{
string localStatus = "FAILED";
string _dcmInstanceId = UnitId.Get(context);
int nDcmInstanceId = Convert.ToInt32(_dcmInstanceId);
IList <string> sourceFrameOfReferenceUid = SourceFrameOfReferenceUID.Get(context);
string targetFrameOfReferenceUid = TargetFrameOfReferenceUID.Get(context);
IList <IList <double> > transformationMatrix = TransformationMatrix.Get(context);
IList <int> planningImageIdValues = PlanningImageIdValues.Get(context);
IList <int> verificationImageIdValues = VerificationImageIdValues.Get(context);
IList <string> planningImageSopInstanceUidValues = PlanningImageSopInstanceValues.Get(context);
IList <string> verificationImageSopInstanceUidValues = VerificationImageSopInstanceValues.Get(context);
IList <string> planningFrameOfReferenceUidValues = PlanningImageFrameOfReferenceUidValues.Get(context);
string spatialRegistrationObjectType = SpatialRegistrationObjectType.Get(context);
string siteID = SiteID.Get(context);
IList <decimal> dOffsetValues = new List <decimal>(6);
int nOffsetId = 0;
int nSiteID = 0;
int nPatientID = 0;
if (siteID.Length > 0)
{
nSiteID = Convert.ToInt32(siteID);
}
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
bool result =
_processSpatialRegistrationObject.PrepAndCreateOffsetRecords(
nDcmInstanceId,
spatialRegistrationObjectType,
planningImageIdValues,
verificationImageIdValues,
planningImageSopInstanceUidValues,
verificationImageSopInstanceUidValues,
planningFrameOfReferenceUidValues,
sourceFrameOfReferenceUid,
targetFrameOfReferenceUid,
transformationMatrix,
nSiteID,
ref nPatientID,
ref nOffsetId,
ref dOffsetValues);
if (result)
{
localStatus = "SUCCESS";
}
PatientID.Set(context, nPatientID.ToString());
OffsetID.Set(context, nOffsetId.ToString());
SroProcessedResult.Set(context, result);
OffsetValues.Set(context, dOffsetValues);
ActivityStatus.Set(context, localStatus);
}
/// <summary>
///
/// </summary>
/// <param name="context"></param>
/// <param name="bookmark"></param>
/// <param name="obj"></param>
protected override void OnBookmarkCallback(NativeActivityContext context, Bookmark bookmark, string obj)
{
var method = System.Reflection.MethodBase.GetCurrentMethod().Name;
Debug.Assert(bookmark.Name == BookmarkName);
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Enter: Finished Processing SRO UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), bookmark.Name));
// get the Image IDs for the Verification and Planning images
IList <int> verifImageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)),
VerificationImageSopInstanceUidValues.Get(context), ref verifImageIds);
IList <int> planningImageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)),
PlanningImageSopInstanceUidValues.Get(context), ref planningImageIds);
// (NB for an XVI 5x SRO we only expect a single Planning image & a single Verificationn image
if (verifImageIds.Count != 1 || planningImageIds.Count != 1)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing SRO UnitId: [{1}], Verification and/or Planning Image Ids were not correctly found", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
foreach (int imageId in verifImageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing SRO UnitId: [{1}], Found Verification Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), imageId.ToString()));
}
foreach (int imageId in planningImageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing SRO UnitId: [{1}], Found Planning Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), imageId.ToString()));
}
PlanningImageIds.Set(context, planningImageIds);
VerificationImageIds.Set(context, verifImageIds);
OutUnitId.Set(context, UnitId.Get(context));
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Exit: Finished Processing SRO UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), bookmark.Name));
}
/// <summary>
/// </summary>
/// <param name="context"></param>
protected override void DoWork(CodeActivityContext context)
{
ActivityStatus.Set(context, "FAILED");
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
double xCoord = -9999.99;
double yCoord = -9999.99;
string localStatus = _processRtImageFromIView.ComputeIViewGTRtImagePosition(
IViewGTPortalImageFilename.Get(context), ref xCoord, ref yCoord);
RtImagePositionXmm.Set(context, xCoord);
RtImagePositionYmm.Set(context, yCoord);
ActivityStatus.Set(context, localStatus);
}
/// <summary> </summary>
/// <param name="context"></param>
protected override void DoWork(CodeActivityContext context)
{
string localStatus = "FAILED";
IList <string> _dcmInstanceIds = StructureSetIds.Get(context);
int nDcmInstanceId = 0;
string isocenterCoordinates = "";
IList <string> spatialIsocenters = new List <string>();
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
ActivityStatus.Set(context, localStatus);
foreach (string dcmInstance in _dcmInstanceIds)
{
nDcmInstanceId = Convert.ToInt32(dcmInstance);
isocenterCoordinates = _processSpatialRegistrationObject.ExtractSpatialIsocenterCoordinates(nDcmInstanceId);
spatialIsocenters.Add(isocenterCoordinates);
}
localStatus = "SUCCESS";
SpatialIsocenterCoordinates.Set(context, spatialIsocenters);
ActivityStatus.Set(context, localStatus);
}
/// <summary> </summary>
/// <param name="context"></param>
protected override void DoWork(CodeActivityContext context)
{
string localStatus = "FAILED";
ActivityStatus.Set(context, localStatus);
string _dcmInstanceId = UnitId.Get(context);
int nDcmInstanceId = Convert.ToInt32(_dcmInstanceId);
string siteID = "";
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
bool result = _processSpatialRegistrationObject.IsObjectTreatmentDeliveryBased(nDcmInstanceId, ref siteID);
if (result)
{
localStatus = "SUCCESS";
}
Result.Set(context, result);
SiteID.Set(context, siteID);
ActivityStatus.Set(context, localStatus);
}
/// <summary> </summary>
/// <param name="context"></param>
protected override void DoWork(CodeActivityContext context)
{
string localStatus = "FAILED";
ActivityStatus.Set(context, localStatus);
string _dcmInstanceId = UnitId.Get(context);
int nDcmInstanceId = Convert.ToInt32(_dcmInstanceId);
string referencedRPSUid = "";
context.GetExtension <CompositionContainer>().SatisfyImportsOnce(this);
bool result = _processSpatialRegistrationObject.IsElektaXVI5xSRO(nDcmInstanceId, ref referencedRPSUid);
if (result)
{
localStatus = "SUCCESS";
}
Result.Set(context, result);
ReferencedRPSUid.Set(context, referencedRPSUid);
ActivityStatus.Set(context, localStatus);
}
/// <summary>
///
/// </summary>
/// <param name="context"></param>
/// <param name="pCancelBookmarkCreation"></param>
protected override void OnBeforeCreateBookmark(NativeActivityContext context, out bool pCancelBookmarkCreation)
{
var method = System.Reflection.MethodBase.GetCurrentMethod().Name;
pCancelBookmarkCreation = false;
_logger.Log(EventSeverity.Debug, method,
string.Format("[{0}] Enter: Processing UnitId: [{1}], Bookmark name: [{2}], Extension Recorded Id:[{3}]",
Thread.CurrentThread.ManagedThreadId,
UnitId.Get(context), BookmarkName, _processSpatialRegistrationObject.ConstructedBy));
var registrationType = SpatialRegistrationObjectType.Get(context);
var planningSopInstanceUids = PlanningImageSopInstanceValues.Get(context);
switch (registrationType)
{
case "2D":
var ref2DImageInfo = _processSpatialRegistrationObject.GetReferenced2DImageInfo(Int32.Parse(UnitId.Get(context)), planningSopInstanceUids);
foreach (var tuple in ref2DImageInfo)
{
foreach (string refSopInstanceUid in tuple.Item2)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Looking for IMG with SOP Instance: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), refSopInstanceUid));
}
var metadata = _processSpatialRegistrationObject.BuildMonitorMetadataForReferencedImageData(tuple.Item1, tuple.Item2);
IList <int> imageIds = new List <int>();
//
// If the dataset we are planning to wait is already available
// skip the bookmark creation and proceed to next activity.
//
if (_waitSetDataWrapper.IsDataAvailable(metadata))
{
pCancelBookmarkCreation = true;
_processSpatialRegistrationObject.GetReferencedImageIds(Int32.Parse(UnitId.Get(context)), VerificationImageSopInstanceValues.Get(context), ref imageIds);
if (imageIds.Count > 0)
{
foreach (int image_id in imageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Found Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), image_id.ToString()));
}
}
if (imageIds.Count == 0)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing UnitId: [{1}], Image Id list was not set correctly", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
VerificationImageIds.Set(context, imageIds);
OutUnitId.Set(context, UnitId.Get(context));
}
else
{
// Perform manual processing to see which images are currently available
// This needs to handle 1-N cases
_processSpatialRegistrationObject.GetReferencedImageIds(Int32.Parse(UnitId.Get(context)), VerificationImageSopInstanceValues.Get(context), ref imageIds);
// based on that result set, set the bookmark if we are still missing some data
if (imageIds.Count < VerificationImageSopInstanceValues.Get(context).Count)
{
BookmarkMetadata.Set(context, metadata.ToString());
_waitSetDataWrapper.InitiateWaitForData(context.WorkflowInstanceId, BookmarkName,
metadata,
_waitHandlersRepository.Get("WorkQueueElement"));
}
}
}
break;
case "3D":
var ref3DImageInfo = _processSpatialRegistrationObject.GetReferenced3DImageInfo(Int32.Parse(UnitId.Get(context)), planningSopInstanceUids);
int i = 0;
foreach (var tuple in ref3DImageInfo)
{
if (tuple.Item2.Count == 0)
{
continue;
}
foreach (string refSopInstanceUid in tuple.Item3)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Looking for DCM SOP Instance: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), refSopInstanceUid));
}
string verForUid = string.Empty;
if (!base._useQueryNotificationFor3DWorkflows)
{
verForUid = _processSpatialRegistrationObject.GetReferencedFrameOfReferenceInfo(Int32.Parse(UnitId.Get(context)));
}
var metadata = _processSpatialRegistrationObject.BuildMonitorMetadataForReferencedDicomData(tuple.Item1, tuple.Item2[i], verForUid, tuple.Item3);
//
// If the dataset we are planning to wait is already available
// skip the bookmark creation and proceed to next activity.
//
if (_waitSetDataWrapper.IsDataAvailable(metadata))
{
pCancelBookmarkCreation = true;
IList <int> imageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)), VerificationImageSopInstanceValues.Get(context), ref imageIds);
foreach (int image_id in imageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing UnitId: [{1}], Found Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), image_id.ToString()));
}
if (imageIds.Count == 0)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing UnitId: [{1}], Image Id list was not set correctly", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
VerificationImageIds.Set(context, imageIds);
OutUnitId.Set(context, UnitId.Get(context));
//if (!base._useQueryNotificationFor3DWorkflows)
//{
// if (!String.IsNullOrEmpty(metadata.DataMonitoringEventId))
// {
// WaitEventManager.TryRemoveEvent(metadata.DataMonitoringEventId);
// }
//}
}
else
{
BookmarkMetadata.Set(context, metadata.ToString());
if (base._useQueryNotificationFor3DWorkflows)
{
_waitSetDataWrapper.InitiateWaitForData(context.WorkflowInstanceId, BookmarkName,
metadata, _waitHandlersRepository.Get("WorkQueueElement"));
}
else
{
_waitSetDataWrapper.InitiateWaitForDataEvent(context.WorkflowInstanceId, BookmarkName,
metadata, _waitHandlersRepository.Get("WorkQueueElement"));
}
}
i++;
}
break;
}
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Exit: Processing UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), BookmarkName));
}
/// <summary>
///
/// </summary>
/// <param name="context"></param>
/// <param name="pCancelBookmarkCreation"></param>
protected override void OnBeforeCreateBookmark(NativeActivityContext context, out bool pCancelBookmarkCreation)
{
var method = System.Reflection.MethodBase.GetCurrentMethod().Name;
pCancelBookmarkCreation = false;
_logger.Log(EventSeverity.Debug, method,
string.Format("[{0}] Enter: Processing SRO UnitId: [{1}], Bookmark name: [{2}], Extension Recorded Id:[{3}]",
Thread.CurrentThread.ManagedThreadId,
UnitId.Get(context), BookmarkName, _processSpatialRegistrationObject.ConstructedBy));
var planningSopInstanceUids = PlanningImageSopInstanceUidValues.Get(context);
var verificationSopInstanceUids = VerificationImageSopInstanceUidValues.Get(context);
// we want to wait for both planning and verification instances
//IList<string> instanceUidsToWaitFor =
// planningSopInstanceUids.Concat(verificationSopInstanceUids).ToList();
string verForUid = string.Empty;
if (!base._useQueryNotificationFor3DWorkflows)
{
verForUid = _processSpatialRegistrationObject.GetLocalizationFrameOfRefFromXVISRO(Int32.Parse(UnitId.Get(context)));
}
var metadata = _processSpatialRegistrationObject.BuildMonitorMetadataForXVI5xReferencedDicomData(verForUid, verificationSopInstanceUids);
//
// If the dataset we are planning to wait for is already available
// skip the bookmark creation and proceed to next activity.
//
if (_waitSetDataWrapper.IsDataAvailable(metadata))
{
pCancelBookmarkCreation = true;
// get the Image IDs for the Verification and Planning images
IList <int> verifImageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)),
VerificationImageSopInstanceUidValues.Get(context), ref verifImageIds);
IList <int> planningImageIds = new List <int>();
_processSpatialRegistrationObject.GetReferencedImageIdsFromSOPInstanceUIDs(Int32.Parse(UnitId.Get(context)),
PlanningImageSopInstanceUidValues.Get(context), ref planningImageIds);
// (NB for an XVI 5x SRO we only expect a single Planning image & a single Verification image
if (verifImageIds.Count != 1 || planningImageIds.Count != 1)
{
_logger.Log(EventSeverity.Error, method, string.Format("[{0}] Processing UnitId: [{1}], Verification and/or Planning Image Ids were not correctly found", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context)));
ActivityStatus.Set(context, "FAILED");
}
else
{
ActivityStatus.Set(context, "SUCCESS");
}
foreach (int imageId in verifImageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing SRO UnitId: [{1}], Found Verification Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), imageId.ToString()));
}
foreach (int imageId in planningImageIds)
{
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Processing SRO UnitId: [{1}], Found Planning Image ID: [{2}]", Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), imageId.ToString()));
}
PlanningImageIds.Set(context, planningImageIds);
VerificationImageIds.Set(context, verifImageIds);
OutUnitId.Set(context, UnitId.Get(context));
//if (!base._useQueryNotificationFor3DWorkflows)
//{
// if (!String.IsNullOrEmpty(metadata.DataMonitoringEventId))
// {
// WaitEventManager.TryRemoveEvent(metadata.DataMonitoringEventId);
// }
//}
}
else
{
BookmarkMetadata.Set(context, metadata.ToString());
if (base._useQueryNotificationFor3DWorkflows)
{
_waitSetDataWrapper.InitiateWaitForData(context.WorkflowInstanceId, BookmarkName,
metadata, _waitHandlersRepository.Get("WorkQueueElement"));
}
else
{
_waitSetDataWrapper.InitiateWaitForDataEvent(context.WorkflowInstanceId, BookmarkName,
metadata, _waitHandlersRepository.Get("WorkQueueElement"));
}
}
_logger.Log(EventSeverity.Debug, method, string.Format("[{0}] Exit: Processing SRO UnitId: [{1}], Bookmark name: [{2}]",
Thread.CurrentThread.ManagedThreadId, UnitId.Get(context), BookmarkName));
}