public void AdddNode(string Path, profileNode newNode)
{
profileNode aux;
if (Path == null || Path.Length == 0 || Path == "/")
{
masterNode.Add(newNode.profName, newNode);
return;
}
aux = FindNode(Path);
if (aux != null && !aux.childrens.ContainsKey(newNode.profName))
{
aux.childrens.Add(newNode.profName, newNode);
}
else
{
throw new Exception("New node cannot be added, wrong Path!");
}
}
public void GenerateProfile(profileNode item)
{
Process myProc = new Process();
myProc.StartInfo.FileName = item.profProgram;
myProc.StartInfo.RedirectStandardOutput = false;
myProc.StartInfo.RedirectStandardError = false;
myProc.StartInfo.UseShellExecute = false;
//myProc.StartInfo.CreateNoWindow = true ;
/* Environment.SetEnvironmentVariable("INSTALLDIR", set.installDir);
* Environment.SetEnvironmentVariable("INPUTFILE", listFile);
* Environment.SetEnvironmentVariable("OUTPUTFILE", item.OutFileName);*/
string param = item.progParameters;
myProc.StartInfo.Arguments = param + " " + item.OutFileName;
myProc.Start();
myProc.WaitForExit();
}
public Dictionary <string, protInfo> ReadProfile(profileNode node)
{
string line;
bool flag = false;
protInfo profile;
Dictionary <string, protInfo> profList = new Dictionary <string, protInfo>();
string protName;
if (File.Exists(node.OutFileName))
{
StreamReader file = null;
try
{
file = new StreamReader(node.OutFileName);
line = file.ReadLine();
while (line != null)
{
if (line.Contains(">"))
{
string[] profState;
profile = new protInfo();
flag = true;
string [] nameTmp;
protName = line.Replace(">", "");
nameTmp = protName.Split(new char [] { '/', '\\' });
protName = nameTmp[nameTmp.Length - 1];
profile.sequence = file.ReadLine();
line = file.ReadLine();
profState = line.Split(' ');
profile.profile = new List <byte>(profState.Length);
foreach (var item in profState)
{
profile.profile.Add(node.GetCodedState(item));
}
if (profile.sequence.Length > 5 || profile.profile.Count != 0)
{
profList.Add(protName, profile);
}
line = file.ReadLine();
}
else
{
line = file.ReadLine();
}
}
}
finally
{
if (file != null)
{
file.Close();
}
}
if (!flag)
{
throw new Exception("Error: In the profile file: " + node.OutFileName + " could not find line that begins with > ");
}
}
return(profList);
}
public profileNode(profileNode copy)
{
CopyNode(copy);
}