public static void CheckAll(SrmDocument document)
{
using (var checkReportCompatibility = new CheckReportCompatibility(document))
{
checkReportCompatibility.CheckAll();
}
}
public static void CheckAll(SrmDocument document)
{
using (var checkReportCompatibility = new CheckReportCompatibility(document))
{
checkReportCompatibility.CheckAll();
}
}
public void TestCustomReportsCompatibility()
{
TestSmallMolecules = false; // Mixed molecule docs create different report columns
var myType = typeof (MultiLabelRatioTest);
var document = ResultsUtil.DeserializeDocument("MultiLabel.sky", myType);
// ReSharper disable once AssignNullToNotNullAttribute
var customReports = (ReportSpecList)new XmlSerializer(typeof(ReportSpecList)).Deserialize(
myType.Assembly.GetManifestResourceStream(myType, "MultiLabelCustomReports.skyr"));
Assert.AreNotEqual(0, customReports.Count);
using (var checkReportCompatibility = new CheckReportCompatibility(document))
{
checkReportCompatibility.CheckAll();
foreach (var customReport in customReports)
{
checkReportCompatibility.CheckReport(customReport);
}
}
}
public void TestConverted()
{
var assembly = typeof(LiveReportPivotTest).Assembly;
XmlSerializer documentSerializer = new XmlSerializer(typeof(SrmDocument));
// ReSharper disable once AssignNullToNotNullAttribute
var document = (SrmDocument)documentSerializer.Deserialize(
assembly.GetManifestResourceStream(typeof(ReportSpecConverterTest), "silac_1_to_4.sky"));
XmlSerializer reportSerializer = new XmlSerializer(typeof(ReportSpecList));
// ReSharper disable once AssignNullToNotNullAttribute
var reports = (ReportSpecList)
reportSerializer.Deserialize(assembly.GetManifestResourceStream(typeof(ReportSpecConverterTest),
"ResultSummaryPivot.skyr"));
Assert.AreNotEqual(0, reports.Count);
using (var checker = new CheckReportCompatibility(document))
{
foreach (var report in reports)
{
checker.CheckReport(report);
}
}
}
public void TestPivotIsotopeLabel()
{
TestSmallMolecules = false; // Mixed molecule docs create different report columns
var assembly = typeof(ReportSpecConverterTest).Assembly;
XmlSerializer documentSerializer = new XmlSerializer(typeof(SrmDocument));
// ReSharper disable once AssignNullToNotNullAttribute
var docWithLabel = (SrmDocument)documentSerializer.Deserialize(
assembly.GetManifestResourceStream(typeof(ReportSpecConverterTest), "HeavyLabeledLeucine.sky"));
XmlSerializer reportSerializer = new XmlSerializer(typeof(ReportSpecList));
// ReSharper disable once AssignNullToNotNullAttribute
var reports = (ReportSpecList)
reportSerializer.Deserialize(assembly.GetManifestResourceStream(typeof (ReportSpecConverterTest),
"PivotIsotopeLabel.skyr"));
Assert.AreNotEqual(0, reports.Count);
using (var checker = new CheckReportCompatibility(docWithLabel))
{
foreach (var report in reports)
{
checker.CheckReport(report);
}
}
}