public void test_Rule_ancestor_add() { Rule ia = new RateRule(2,4); ia.setVariable("a"); ia.setMath(libsbml.parseFormula("9")); Model m = new Model(2,4); m.addRule(ia); ia = null; ListOf lo = m.getListOfRules(); Rule obj = m.getRule(0); assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m ); assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo ); assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null ); assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null ); }
public void test_Rule_parent_add() { Rule ia = new RateRule(2,4); ia.setVariable("a"); ia.setMath(libsbml.parseFormula("9")); Model m = new Model(2,4); m.addRule(ia); ia = null; ListOf lo = m.getListOfRules(); assertTrue( lo == m.getRule(0).getParentSBMLObject() ); assertTrue( m == lo.getParentSBMLObject() ); }
public void test_Model_addRules() { Rule r1 = new AlgebraicRule(2,4); Rule r2 = new AssignmentRule(2,4); Rule r3 = new RateRule(2,4); r2.setVariable( "r2"); r3.setVariable( "r3"); r1.setMath(libsbml.parseFormula("2")); r2.setMath(libsbml.parseFormula("2")); r3.setMath(libsbml.parseFormula("2")); M.addRule(r1); M.addRule(r2); M.addRule(r3); assertTrue( M.getNumRules() == 3 ); }
public void test_internal_consistency_check_99904_rule_rate() { SBMLDocument d = new SBMLDocument(2,4); long errors; Rule r = new RateRule(2,4); d.setLevelAndVersion(1,2,false); Model m = d.createModel(); Compartment c = m.createCompartment(); c.setId("cc"); c.setConstant(false); r.setVariable("cc"); r.setFormula("2"); r.setMetaId("mmm"); m.addRule(r); errors = d.checkInternalConsistency(); assertTrue( errors == 0 ); d = null; }
public void test_internal_consistency_check_99911_rule_rate() { SBMLDocument d = new SBMLDocument(2,4); long errors; Model m = d.createModel(); Parameter p = m.createParameter(); p.setId("p"); p.setConstant(false); Rule r = new RateRule(2,4); d.setLevelAndVersion(2,1,false); r.setVariable("p"); r.setSBOTerm(2); m.addRule(r); errors = d.checkInternalConsistency(); assertTrue( errors == 0 ); d = null; }
public void test_RateRule_L1() { RateRule r = new RateRule(1,2); assertEquals( false, (r.hasRequiredAttributes()) ); r.setVariable("r"); assertEquals( false, (r.hasRequiredAttributes()) ); r.setFormula("r"); assertEquals( true, r.hasRequiredAttributes() ); r = null; }
public void test_Rule_copyConstructor() { Rule o1 = new RateRule(2,1); o1.setVariable("a"); assertTrue( o1.getVariable() == "a" ); ASTNode node = new ASTNode(libsbml.AST_CONSTANT_PI); o1.setMath(node); node = null; assertTrue( o1.isSetMath() == true ); Rule o2 = new Rule(o1); assertTrue( o2.getVariable() == "a" ); assertTrue( o2.isSetMath() == true ); assertTrue( o2.getParentSBMLObject() == o1.getParentSBMLObject() ); o2 = null; o1 = null; }