protected override void Because()
{
var sbmlModel = new Model(3, 1);
//Event
var sbmlEvent = sbmlModel.createEvent();
sbmlEvent.setId("e1");
sbmlEvent.setName("e1_name");
sbmlEvent.setNotes("eventNotes");
//Trigger
var trigger = sbmlModel.createTrigger();
trigger.setMath(libsbml.parseFormula("1 > 0 "));
sbmlEvent.setTrigger(trigger);
//Event Assignment
var assign = new EventAssignment(3, 1);
assign.setId("ea1");
assign.setName("ea1_name");
assign.setVariable("x1");
assign.setMath(libsbml.parseFormula("1+2"));
sbmlEvent.addEventAssignment(assign);
sbmlModel.addEvent(sbmlEvent);
sut.DoImport(sbmlModel, new MoBiProject(), A.Fake <SBMLInformation>(), new MoBiMacroCommand());
}
public void test_Event_addEventAssignment2()
{
Event e = new Event(2,2);
EventAssignment ea = new EventAssignment(2,3);
ea.setVariable( "f");
ea.setMath(libsbml.parseFormula("a-n"));
int i = e.addEventAssignment(ea);
assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH );
assertTrue( e.getNumEventAssignments() == 0 );
ea = null;
e = null;
}
public void test_Event_addEventAssignment1()
{
Event e = new Event(2,2);
EventAssignment ea = new EventAssignment(2,2);
int i = e.addEventAssignment(ea);
assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
ea.setVariable( "f");
i = e.addEventAssignment(ea);
assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
ea.setMath(libsbml.parseFormula("a-n"));
i = e.addEventAssignment(ea);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( e.getNumEventAssignments() == 1 );
ea = null;
e = null;
}
public void test_EventAssignment_parent_add()
{
Event e = new Event(2,4);
EventAssignment ea = new EventAssignment(2,4);
ea.setVariable("c");
ea.setMath(libsbml.parseFormula("K+L"));
e.addEventAssignment(ea);
ea = null;
ListOf lo = e.getListOfEventAssignments();
assertTrue( lo == e.getEventAssignment(0).getParentSBMLObject() );
assertTrue( e == lo.getParentSBMLObject() );
}
public void test_EventAssignment_ancestor_add()
{
Event e = new Event(2,4);
EventAssignment ea = new EventAssignment(2,4);
ea.setVariable("c");
ea.setMath(libsbml.parseFormula("K+L"));
e.addEventAssignment(ea);
ea = null;
ListOf lo = e.getListOfEventAssignments();
EventAssignment obj = e.getEventAssignment(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == e );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
}
public void test_WriteSBML_Event_full()
{
string expected = "<event id=\"e\">\n" +
" <trigger>\n" +
" <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n" +
" <apply>\n" +
" <leq/>\n" +
" <ci> P1 </ci>\n" +
" <ci> t </ci>\n" +
" </apply>\n" +
" </math>\n" +
" </trigger>\n" +
" <listOfEventAssignments>\n" +
" <eventAssignment sboTerm=\"SBO:0000064\" variable=\"k2\">\n" +
" <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n" +
" <cn type=\"integer\"> 0 </cn>\n" +
" </math>\n" +
" </eventAssignment>\n" +
" </listOfEventAssignments>\n" +
"</event>";
D.setLevelAndVersion(2,3,false);
Event e = D.createModel().createEvent();
e.setId("e");
ASTNode node = libsbml.parseFormula("leq(P1,t)");
Trigger t = new Trigger ( 2,3 );
t.setMath(node);
ASTNode math = libsbml.parseFormula("0");
EventAssignment ea = new EventAssignment ( 2,3 );
ea.setVariable("k2");
ea.setMath(math);
ea.setSBOTerm(64);
e.setTrigger(t);
e.addEventAssignment(ea);
assertEquals( true, equals(expected,e.toSBML()) );
}
public void test_internal_consistency_check_99911_ea()
{
SBMLDocument d = new SBMLDocument(2,4);
d.setLevelAndVersion(2,1,false);
long errors;
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
c.setConstant(false);
Event e = m.createEvent();
ASTNode ast = libsbml.parseFormula("2*x");
Trigger t = e.createTrigger();
t.setMath(ast);
EventAssignment ea = new EventAssignment(2,4);
ea.setVariable("c");
ea.setSBOTerm(2);
ea.setMath(ast);
e.addEventAssignment(ea);
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 21203 );
d = null;
}
public void test_EventAssignment()
{
EventAssignment ea = new EventAssignment(2,4);
assertEquals( false, (ea.hasRequiredAttributes()) );
ea.setVariable("ea");
assertEquals( true, ea.hasRequiredAttributes() );
ea = null;
}
public void test_Event_full()
{
ASTNode math1 = libsbml.parseFormula("0");
Trigger trigger = new Trigger(2,4);
ASTNode math = libsbml.parseFormula("0");
Event e = new Event(2,4);
EventAssignment ea = new EventAssignment(2,4);
ea.setVariable( "k");
ea.setMath(math);
trigger.setMath(math1);
e.setTrigger(trigger);
e.setId( "e1");
e.setName( "Set k2 to zero when P1 <= t");
e.addEventAssignment(ea);
assertTrue( e.getNumEventAssignments() == 1 );
assertNotEquals(e.getEventAssignment(0),ea);
math = null;
e = null;
}
public void test_EventAssignment_copyConstructor()
{
EventAssignment o1 = new EventAssignment(2,4);
o1.setVariable("c2");
assertTrue( o1.getVariable() == "c2" );
ASTNode node = new ASTNode(libsbml.AST_CONSTANT_PI);
o1.setMath(node);
node = null;
assertTrue( o1.getMath() != null );
EventAssignment o2 = new EventAssignment(o1);
assertTrue( o2.getVariable() == "c2" );
assertTrue( o2.getMath() != null );
assertTrue( o2.getParentSBMLObject() == o1.getParentSBMLObject() );
o2 = null;
o1 = null;
}