public static int Main(string[] args)
{
gdcm.Global global = gdcm.Global.GetInstance();
if (!global.LoadResourcesFiles())
{
System.Console.WriteLine("Could not LoadResourcesFiles");
return(1);
}
string file1 = args[0];
string file2 = args[1];
Reader reader = new Reader();
reader.SetFileName(file1);
bool ret = reader.Read();
if (!ret)
{
return(1);
}
string certpath = gdcm.Filename.Join(gdcm.Testing.GetSourceDirectory(), "/Testing/Source/Data/certificate.pem");
gdcm.CryptoFactory fact = gdcm.CryptoFactory.GetFactoryInstance();
gdcm.CryptographicMessageSyntax cms = fact.CreateCMSProvider();
if (!cms.ParseCertificateFile(certpath))
{
return(1);
}
//Anonymizer ano = new Anonymizer();
SmartPtrAno sano = Anonymizer.New();
Anonymizer ano = sano.__ref__();
//SimpleSubjectWatcher watcher = new SimpleSubjectWatcher(ano, "Anonymizer");
MyWatcher watcher = new MyWatcher(ano);
ano.SetFile(reader.GetFile());
ano.SetCryptographicMessageSyntax(cms);
if (!ano.BasicApplicationLevelConfidentialityProfile())
{
return(1);
}
Writer writer = new Writer();
writer.SetFileName(file2);
writer.SetFile(ano.GetFile());
ret = writer.Write();
if (!ret)
{
return(1);
}
return(0);
}
public static int Main(string[] args)
{
gdcm.FileMetaInformation.SetSourceApplicationEntityTitle("My ClinicalTrial App");
// http://www.oid-info.com/get/1.3.6.1.4.17434
string THERALYS_ORG_ROOT = "1.3.6.1.4.17434";
gdcm.UIDGenerator.SetRoot(THERALYS_ORG_ROOT);
System.Console.WriteLine("Root dir is now: " + gdcm.UIDGenerator.GetRoot());
gdcm.Global global = gdcm.Global.GetInstance();
if (!global.LoadResourcesFiles())
{
System.Console.WriteLine("Could not LoadResourcesFiles");
return(1);
}
if (args.Length != 2)
{
System.Console.WriteLine("Usage:");
System.Console.WriteLine("ClinicalTrialIdentificationWorkflow input_dir output_dir");
return(1);
}
string dir1 = args[0];
string dir2 = args[1];
// Check input is valid:
if (!gdcm.PosixEmulation.FileIsDirectory(dir1))
{
System.Console.WriteLine("Input directory: " + dir1 + " does not exist. Sorry");
return(1);
}
if (!gdcm.PosixEmulation.FileIsDirectory(dir2))
{
System.Console.WriteLine("Output directory: " + dir2 + " does not exist. Sorry");
return(1);
}
// Recursively search all file within this toplevel directory:
Directory d = new Directory();
uint nfiles = d.Load(dir1, true);
if (nfiles == 0)
{
return(1);
}
// Let's use the pre-shipped certificate of GDCM.
string certpath = gdcm.Filename.Join(gdcm.Testing.GetSourceDirectory(), "/Testing/Source/Data/certificate.pem");
gdcm.CryptoFactory fact = gdcm.CryptoFactory.GetFactoryInstance();
gdcm.CryptographicMessageSyntax cms = fact.CreateCMSProvider();
if (!cms.ParseCertificateFile(certpath))
{
System.Console.WriteLine("PEM Certificate : " + certpath + " could not be read. Sorry");
return(1);
}
//Anonymizer ano = new Anonymizer();
// A reference to an actual C++ instance is required here:
SmartPtrAno sano = Anonymizer.New();
Anonymizer ano = sano.__ref__();
//SimpleSubjectWatcher watcher = new SimpleSubjectWatcher(ano, "Anonymizer");
MyWatcher watcher = new MyWatcher(ano);
// Explicitely specify the Cryptographic Message Syntax to use:
ano.SetCryptographicMessageSyntax(cms);
// Process all filenames:
FilenamesType filenames = d.GetFilenames();
for (uint i = 0; i < nfiles; ++i)
{
string filename = filenames[(int)i];
string outfilename = filename.Replace(dir1, dir2);
System.Console.WriteLine("Filename: " + filename);
System.Console.WriteLine("Out Filename: " + outfilename);
if (!ProcessOneFile(ano, filename, outfilename))
{
System.Console.WriteLine("Could not process filename: " + filename);
return(1);
}
}
return(0);
}