private void HandleMarkers(PanelSetOrderLeukemiaLymphoma panelSetOrderLeukemiaLymphoma)
{
panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.SetFirstMarkerPanelIfExists();
XmlNode tableNode1 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode MarkerNode1 = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode cellPopulationNode = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='cell_population_of_interest']", this.m_NameSpaceManager);
XmlNode blankRowNode1 = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='blank_row']", this.m_NameSpaceManager);
XmlNode tableNode2 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode MarkerNode2 = tableNode2.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode blankRowNode2 = tableNode2.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='blank_row']", this.m_NameSpaceManager);
foreach (Business.Flow.CellPopulationOfInterest cellPopulationOfInterest in panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.CellPopulationsOfInterest)
{
Business.Flow.FlowMarkerCollection flowMarkerCollection = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.GetMarkerPanel(cellPopulationOfInterest.Id);
XmlNode nodeToInsertAfter1 = MarkerNode1;
int rowCount = flowMarkerCollection.Count;
int FirstHalfCount = rowCount / 2;
int LastHalfCount = rowCount - FirstHalfCount;
XmlNode newCellPopulationNode = cellPopulationNode.Clone();
newCellPopulationNode.SelectSingleNode("descendant::w:r[w:t='cell_population_of_interest']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.CellPopulationOfInterest;
tableNode1.InsertAfter(newCellPopulationNode, nodeToInsertAfter1);
nodeToInsertAfter1 = newCellPopulationNode;
for (int i = 0; i < FirstHalfCount; i++)
{
XmlNode NewMarkerNode1 = MarkerNode1.Clone();
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_name1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Name;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_interpretation1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Interpretation;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_intensity1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Intensity;
tableNode1.InsertAfter(NewMarkerNode1, nodeToInsertAfter1);
nodeToInsertAfter1 = NewMarkerNode1;
}
XmlNode newBlankRowNode3 = blankRowNode1.Clone();
newBlankRowNode3.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode1.InsertAfter(newBlankRowNode3, nodeToInsertAfter1);
XmlNode nodeToInsertAfter2 = MarkerNode2;
XmlNode newBlankRowNode2 = blankRowNode2.Clone();
newBlankRowNode2.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode2.InsertAfter(newBlankRowNode2, nodeToInsertAfter2);
nodeToInsertAfter2 = newBlankRowNode2;
for (int i = FirstHalfCount; i < rowCount; i++)
{
XmlNode NewMarkerNode2 = MarkerNode2.Clone();
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_name2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Name;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_interpretation2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Interpretation;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_intensity2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Intensity;
tableNode2.InsertAfter(NewMarkerNode2, nodeToInsertAfter2);
nodeToInsertAfter2 = NewMarkerNode2;
}
XmlNode newBlankRowNode4 = blankRowNode2.Clone();
newBlankRowNode4.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode2.InsertAfter(newBlankRowNode4, nodeToInsertAfter2);
nodeToInsertAfter2 = newBlankRowNode4;
}
tableNode1.RemoveChild(cellPopulationNode);
tableNode1.RemoveChild(MarkerNode1);
tableNode1.RemoveChild(blankRowNode1);
tableNode2.RemoveChild(blankRowNode2);
tableNode2.RemoveChild(MarkerNode2);
}
public override void ToXml(XElement document)
{
PanelSetOrderLeukemiaLymphoma panelSetOrder = (PanelSetOrderLeukemiaLymphoma)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
this.AddHeader(document, panelSetOrder, "Leukemia/Lymphoma Phenotyping");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Impression", document, "F");
this.HandleLongString(panelSetOrder.Impression, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Interpretive Comment:", document, "F");
this.HandleLongString(panelSetOrder.InterpretiveComment, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Pathologist: " + panelSetOrder.Signature, document, "F");
if (panelSetOrder.FinalTime.HasValue == true)
{
this.AddNextObxElement("E-signed " + panelSetOrder.FinalTime.Value.ToString("MM/dd/yyyy HH:mm"), document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddAmendments(document);
this.AddNextObxElement("Cell Population Of Interest: " + panelSetOrder.CellPopulationOfInterest, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Markers:", document, "F");
foreach (YellowstonePathology.Business.Flow.FlowMarkerItem flowMarkerItem in panelSetOrder.FlowMarkerCollection)
{
this.AddNextObxElement(flowMarkerItem.Name, document, "F");
this.AddNextObxElement("Interpretation: " + flowMarkerItem.Interpretation, document, "F");
this.AddNextObxElement("Intensity: " + flowMarkerItem.Intensity, document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Cell Distribution:", document, "F");
double LymphCnt = Convert.ToDouble(panelSetOrder.LymphocyteCount);
double MonoCnt = Convert.ToDouble(panelSetOrder.MonocyteCount);
double MyeCnt = Convert.ToDouble(panelSetOrder.MyeloidCount);
double DimCnt = Convert.ToDouble(panelSetOrder.DimCD45ModSSCount);
double OtherCnt = Convert.ToDouble(panelSetOrder.OtherCount);
string blastCD34Percent = panelSetOrder.EGateCD34Percent;
string blastCD117Percent = panelSetOrder.EGateCD117Percent;
double TotalCnt = LymphCnt + MonoCnt + MyeCnt + DimCnt;
double LymphPcnt = LymphCnt / TotalCnt;
double MonoPcnt = MonoCnt / TotalCnt;
double MyePcnt = MyeCnt / TotalCnt;
double DimPcnt = DimCnt / TotalCnt;
double OtherPcnt = OtherCnt / TotalCnt;
this.AddNextObxElement("Lymphocytes " + this.GetGatingPercent(LymphPcnt), document, "F");
this.AddNextObxElement("Monocytes " + this.GetGatingPercent(MonoPcnt), document, "F");
this.AddNextObxElement("Myeloid " + this.GetGatingPercent(MyePcnt), document, "F");
this.AddNextObxElement("Dim CD45/Mod SS " + this.GetGatingPercent(DimPcnt), document, "F");
if (string.IsNullOrEmpty(blastCD34Percent) == false || string.IsNullOrEmpty(blastCD117Percent) == false)
{
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Blast Marker Percentages (as % of nucleated cells):", document, "F");
this.AddNextObxElement("CD34 " + blastCD34Percent, document, "F");
this.AddNextObxElement("CD117 " + blastCD117Percent, document, "F");
}
if (string.IsNullOrEmpty(panelSetOrder.SpecimenViabilityPercent) == false && panelSetOrder.SpecimenViabilityPercent != "0")
{
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Specimen Viability Percentage: " + panelSetOrder.SpecimenViabilityPercent, document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Clinical History:", document, "F");
this.HandleLongString(this.m_AccessionOrder.ClinicalHistory, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Method: Qualitative Flow Cytometry", document, "F");
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(panelSetOrder.OrderedOn, panelSetOrder.OrderedOnId);
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Specimen: " + specimenOrder.Description, document, "F");
this.AddNextObxElement("", document, "F");
string collectionDateTimeString = YellowstonePathology.Business.Helper.DateTimeExtensions.CombineDateAndTime(specimenOrder.CollectionDate, specimenOrder.CollectionTime);
this.AddNextObxElement("Collection Date/Time: " + collectionDateTimeString, document, "F");
this.AddNextObxElement(string.Empty, document, "F");
this.AddNextObxElement("Specimen Adequacy: " + specimenOrder.SpecimenAdequacy, document, "F");
this.AddNextObxElement("", document, "F");
string asrStatement = "Tests utilizing Analytic Specific Reagents (ASR's) were developed and performance characteristics determined by Yellowstone Pathology Institute, Inc. They have not been cleared or approved by the U.S. Food and Drug Administration. The FDA has determined that such clearance or approval is not necessary. ASR's may be used for clinical purposes and should not be regarded as investigational or for research. This laboratory is certified under the Clinical Laboratory Improvement Amendments of 1988 (CLIA-88) as qualified to perform high complexity clinical laboratory testing.";
this.HandleLongString(asrStatement, document, "F");
this.AddNextObxElement(string.Empty, document, "F");
string locationPerformed = panelSetOrder.GetLocationPerformedComment();
this.AddNextObxElement(locationPerformed, document, "F");
this.AddNextObxElement(string.Empty, document, "F");
}
private void HandleMarkers(PanelSetOrderLeukemiaLymphoma panelSetOrderLeukemiaLymphoma)
{
panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.SetFirstMarkerPanelIfExists();
XmlNode tableNode1 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode MarkerNode1 = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode cellPopulationNode = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='cell_population_of_interest']", this.m_NameSpaceManager);
XmlNode blankRowNode1 = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='blank_row']", this.m_NameSpaceManager);
XmlNode tableNode2 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode MarkerNode2 = tableNode2.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode blankRowNode2 = tableNode2.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='blank_row']", this.m_NameSpaceManager);
foreach (Business.Flow.CellPopulationOfInterest cellPopulationOfInterest in panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.CellPopulationsOfInterest)
{
Business.Flow.FlowMarkerCollection flowMarkerCollection = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.GetMarkerPanel(cellPopulationOfInterest.Id);
XmlNode nodeToInsertAfter1 = MarkerNode1;
int rowCount = flowMarkerCollection.Count;
int FirstHalfCount = rowCount / 2;
int LastHalfCount = rowCount - FirstHalfCount;
XmlNode newCellPopulationNode = cellPopulationNode.Clone();
newCellPopulationNode.SelectSingleNode("descendant::w:r[w:t='cell_population_of_interest']/w:t", this.m_NameSpaceManager).InnerText = cellPopulationOfInterest.Description;
tableNode1.InsertAfter(newCellPopulationNode, nodeToInsertAfter1);
nodeToInsertAfter1 = newCellPopulationNode;
for (int i = 0; i < FirstHalfCount; i++)
{
XmlNode NewMarkerNode1 = MarkerNode1.Clone();
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_name1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Name;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_interpretation1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Interpretation;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_intensity1']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Intensity;
tableNode1.InsertAfter(NewMarkerNode1, nodeToInsertAfter1);
nodeToInsertAfter1 = NewMarkerNode1;
}
XmlNode newBlankRowNode3 = blankRowNode1.Clone();
newBlankRowNode3.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode1.InsertAfter(newBlankRowNode3, nodeToInsertAfter1);
XmlNode nodeToInsertAfter2 = MarkerNode2;
XmlNode newBlankRowNode2 = blankRowNode2.Clone();
newBlankRowNode2.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode2.InsertAfter(newBlankRowNode2, nodeToInsertAfter2);
nodeToInsertAfter2 = newBlankRowNode2;
for (int i = FirstHalfCount; i < rowCount; i++)
{
XmlNode NewMarkerNode2 = MarkerNode2.Clone();
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_name2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Name;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_interpretation2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Interpretation;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_intensity2']/w:t", this.m_NameSpaceManager).InnerText = flowMarkerCollection[i].Intensity;
tableNode2.InsertAfter(NewMarkerNode2, nodeToInsertAfter2);
nodeToInsertAfter2 = NewMarkerNode2;
}
XmlNode newBlankRowNode4 = blankRowNode2.Clone();
newBlankRowNode4.SelectSingleNode("descendant::w:r[w:t='blank_row']/w:t", this.m_NameSpaceManager).InnerText = null;
tableNode2.InsertAfter(newBlankRowNode4, nodeToInsertAfter2);
nodeToInsertAfter2 = newBlankRowNode4;
}
tableNode1.RemoveChild(cellPopulationNode);
tableNode1.RemoveChild(MarkerNode1);
tableNode1.RemoveChild(blankRowNode1);
tableNode2.RemoveChild(blankRowNode2);
tableNode2.RemoveChild(MarkerNode2);
}
public override void Render()
{
PanelSetOrderLeukemiaLymphoma panelSetOrderLeukemiaLymphoma = (PanelSetOrderLeukemiaLymphoma)this.m_PanelSetOrder;
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\LeukemiaLymphoma.7.xml";
base.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
this.SetCaseHistory();
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(this.m_PanelSetOrder.OrderedOnId);
this.ReplaceText("specimen_description", specimenOrder.Description);
YellowstonePathology.Business.Document.AmendmentSection amendmentSection = new YellowstonePathology.Business.Document.AmendmentSection();
amendmentSection.SetAmendment(m_PanelSetOrder.AmendmentCollection, this.m_ReportXml, this.m_NameSpaceManager, true);
XmlNode tableNodeDelete = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='report_impression']", this.m_NameSpaceManager);
XmlNode tableNodeDelete2 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='lymphocyte_%']", this.m_NameSpaceManager);
string signature = string.Empty;
if (this.m_PanelSetOrder.Final == true && this.m_PanelSetOrder.PanelSetId != 66)
{
signature = this.m_PanelSetOrder.Signature;
}
else if (this.m_PanelSetOrder.Final == false)
{
signature = "This Case Is Not Final";
}
this.SetXmlNodeData("pathologist_signature", signature);
this.SetXMLNodeParagraphData("report_impression", panelSetOrderLeukemiaLymphoma.Impression);
this.SetXmlNodeData("interpretive_comment", panelSetOrderLeukemiaLymphoma.InterpretiveComment);
this.SetXmlNodeData("cell_population_of_interest", panelSetOrderLeukemiaLymphoma.CellPopulationOfInterest);
double LymphCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.LymphocyteCount);
double MonoCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.MonocyteCount);
double MyeCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.MyeloidCount);
double DimCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.DimCD45ModSSCount);
double OtherCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.OtherCount);
double TotalCnt = LymphCnt + MonoCnt + MyeCnt + DimCnt;
double LymphPcnt = LymphCnt / TotalCnt;
double MonoPcnt = MonoCnt / TotalCnt;
double MyePcnt = MyeCnt / TotalCnt;
double DimPcnt = DimCnt / TotalCnt;
double OtherPcnt = OtherCnt / TotalCnt;
this.SetXmlNodeData("lymphocyte_%", this.GetGatingPercent(LymphPcnt));
this.SetXmlNodeData("monocyte_%", this.GetGatingPercent(MonoPcnt));
this.SetXmlNodeData("myeloid_%", this.GetGatingPercent(MyePcnt));
this.SetXmlNodeData("dimcd45modss_%", this.GetGatingPercent(DimPcnt));
if (string.IsNullOrEmpty(panelSetOrderLeukemiaLymphoma.EGateCD34Percent) == true && string.IsNullOrEmpty(panelSetOrderLeukemiaLymphoma.EGateCD117Percent) == true)
{
this.SetXmlNodeData("CD_34", "");
this.SetXmlNodeData("CD_117", "");
this.SetXmlNodeData("Blast_Header", "");
this.SetXmlNodeData("blast_cd34_percent", "");
this.SetXmlNodeData("blast_cd117_percent", "");
}
else
{
this.SetXmlNodeData("CD_34", "CD34");
this.SetXmlNodeData("CD_117", "CD117");
this.SetXmlNodeData("Blast_Header", "Blast Marker Percentages (as % of nucleated cells):");
this.SetXmlNodeData("blast_cd34_percent", panelSetOrderLeukemiaLymphoma.EGateCD34Percent);
this.SetXmlNodeData("blast_cd117_percent", panelSetOrderLeukemiaLymphoma.EGateCD117Percent);
}
XmlNode tableNode1 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode MarkerNode1 = tableNode1.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name1']", this.m_NameSpaceManager);
XmlNode nodeToInsertAfter1 = MarkerNode1;
int rowCount = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection.Count;
int FirstHalfCount = rowCount / 2;
int LastHalfCount = rowCount - FirstHalfCount;
for (int i = 0; i < FirstHalfCount; i++)
{
XmlNode NewMarkerNode1 = MarkerNode1.Clone();
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_name1']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Name;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_interpretation1']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Interpretation;
NewMarkerNode1.SelectSingleNode("descendant::w:r[w:t='marker_intensity1']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Intensity;
tableNode1.InsertAfter(NewMarkerNode1, nodeToInsertAfter1);
nodeToInsertAfter1 = NewMarkerNode1;
}
tableNode1.RemoveChild(MarkerNode1);
XmlNode tableNode2 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode MarkerNode2 = tableNode2.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name2']", this.m_NameSpaceManager);
XmlNode nodeToInsertAfter2 = MarkerNode2;
for (int i = FirstHalfCount; i < rowCount; i++)
{
XmlNode NewMarkerNode2 = MarkerNode2.Clone();
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_name2']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Name;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_interpretation2']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Interpretation;
NewMarkerNode2.SelectSingleNode("descendant::w:r[w:t='marker_intensity2']/w:t", this.m_NameSpaceManager).InnerText = panelSetOrderLeukemiaLymphoma.FlowMarkerCollection[i].Intensity;
tableNode2.InsertAfter(NewMarkerNode2, nodeToInsertAfter2);
nodeToInsertAfter2 = NewMarkerNode2;
}
tableNode2.RemoveChild(MarkerNode2);
this.SetXmlNodeData("clinical_history", this.m_AccessionOrder.ClinicalHistory);
this.SetXmlNodeData("specimen_description", specimenOrder.Description);
string dateTimeCollected = string.Empty;
if (specimenOrder.CollectionTime.HasValue == true)
{
dateTimeCollected = specimenOrder.CollectionTime.Value.ToString("MM/dd/yyyy HH:mm");
}
else if (specimenOrder.CollectionDate.HasValue == true)
{
dateTimeCollected = specimenOrder.CollectionDate.Value.ToString("MM/dd/yyyy");
}
this.SetXmlNodeData("date_time_collected", dateTimeCollected);
this.SetXmlNodeData("specimen_adequacy", specimenOrder.SpecimenAdequacy);
this.SetXmlNodeData("location_performed", "Technical and professional component(s) performed at Yellowstone Pathology Institute Billings, 2900 12th Avenue North, Suite 295W, Billings, MT 59101 (CLIA:27D0946844).");
this.SaveReport();
}
public override void Render()
{
PanelSetOrderLeukemiaLymphoma panelSetOrderLeukemiaLymphoma = (PanelSetOrderLeukemiaLymphoma)this.m_PanelSetOrder;
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\LeukemiaLymphoma.1.xml";
base.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
this.SetCaseHistory();
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(this.m_PanelSetOrder.OrderedOnId);
this.ReplaceText("specimen_description", specimenOrder.Description);
YellowstonePathology.Business.Amendment.Model.AmendmentCollection amendmentCollection = this.m_AccessionOrder.AmendmentCollection.GetAmendmentsForReport(m_PanelSetOrder.ReportNo);
YellowstonePathology.Business.Document.AmendmentSection amendmentSection = new YellowstonePathology.Business.Document.AmendmentSection();
amendmentSection.SetAmendment(amendmentCollection, this.m_ReportXml, this.m_NameSpaceManager, true);
XmlNode tableNodeDelete = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='report_impression']", this.m_NameSpaceManager);
XmlNode tableNodeDelete2 = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='lymphocyte_%']", this.m_NameSpaceManager);
string signature = string.Empty;
if (this.m_PanelSetOrder.Final == true && this.m_PanelSetOrder.PanelSetId != 66)
{
signature = this.m_PanelSetOrder.Signature;
}
else if (this.m_PanelSetOrder.Final == false)
{
signature = "This Case Is Not Final";
}
this.SetXmlNodeData("pathologist_signature", signature);
this.SetXMLNodeParagraphData("report_impression", panelSetOrderLeukemiaLymphoma.Impression);
this.SetXMLNodeParagraphData("interpretive_comment", panelSetOrderLeukemiaLymphoma.InterpretiveComment);
double LymphCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.LymphocyteCount);
double MonoCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.MonocyteCount);
double MyeCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.MyeloidCount);
double DimCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.DimCD45ModSSCount);
double OtherCnt = Convert.ToDouble(panelSetOrderLeukemiaLymphoma.OtherCount);
double TotalCnt = LymphCnt + MonoCnt + MyeCnt + DimCnt;
double LymphPcnt = LymphCnt / TotalCnt;
double MonoPcnt = MonoCnt / TotalCnt;
double MyePcnt = MyeCnt / TotalCnt;
double DimPcnt = DimCnt / TotalCnt;
double OtherPcnt = OtherCnt / TotalCnt;
this.SetXmlNodeData("lymphocyte_%", this.GetGatingPercent(LymphPcnt));
this.SetXmlNodeData("monocyte_%", this.GetGatingPercent(MonoPcnt));
this.SetXmlNodeData("myeloid_%", this.GetGatingPercent(MyePcnt));
this.SetXmlNodeData("dimcd45modss_%", this.GetGatingPercent(DimPcnt));
if (string.IsNullOrEmpty(panelSetOrderLeukemiaLymphoma.EGateCD34Percent) == true && string.IsNullOrEmpty(panelSetOrderLeukemiaLymphoma.EGateCD117Percent) == true)
{
this.SetXmlNodeData("CD_34", "");
this.SetXmlNodeData("CD_117", "");
this.SetXmlNodeData("Blast_Header", "");
this.SetXmlNodeData("blast_cd34_percent", "");
this.SetXmlNodeData("blast_cd117_percent", "");
}
else
{
this.SetXmlNodeData("CD_34", "CD34");
this.SetXmlNodeData("CD_117", "CD117");
this.SetXmlNodeData("Blast_Header", "Blast Marker Percentages (as % of nucleated cells):");
this.SetXmlNodeData("blast_cd34_percent", panelSetOrderLeukemiaLymphoma.EGateCD34Percent);
this.SetXmlNodeData("blast_cd117_percent", panelSetOrderLeukemiaLymphoma.EGateCD117Percent);
}
if (string.IsNullOrEmpty(panelSetOrderLeukemiaLymphoma.SpecimenViabilityPercent) == true || panelSetOrderLeukemiaLymphoma.SpecimenViabilityPercent == "0")
{
this.SetXmlNodeData("llp_specimen_viability", "");
this.SetXmlNodeData("llp_specimen_viability_percent", "");
}
else
{
this.SetXmlNodeData("llp_specimen_viability", "Specimen Viability Percent");
this.SetXmlNodeData("llp_specimen_viability_percent", panelSetOrderLeukemiaLymphoma.SpecimenViabilityPercent);
}
this.HandleMarkers(panelSetOrderLeukemiaLymphoma);
this.SetXmlNodeData("clinical_history", this.m_AccessionOrder.ClinicalHistory);
this.SetXmlNodeData("specimen_description", specimenOrder.Description);
this.SetXMLNodeParagraphData("additional_testing", this.m_AccessionOrder.PanelSetOrderCollection.GetAdditionalTestingString(this.m_PanelSetOrder.ReportNo));
string dateTimeCollected = string.Empty;
if (specimenOrder.CollectionTime.HasValue == true)
{
dateTimeCollected = specimenOrder.CollectionTime.Value.ToString("MM/dd/yyyy HH:mm");
}
else if (specimenOrder.CollectionDate.HasValue == true)
{
dateTimeCollected = specimenOrder.CollectionDate.Value.ToString("MM/dd/yyyy");
}
this.SetXmlNodeData("date_time_collected", dateTimeCollected);
this.SetXmlNodeData("specimen_adequacy", specimenOrder.SpecimenAdequacy);
this.SetXmlNodeData("location_performed", "Technical and professional component(s) performed at Yellowstone Pathology Institute Billings, 2900 12th Avenue North, Suite 295W, Billings, MT 59101 (CLIA:27D0946844).");
this.SaveReport();
}
