private static void SetupEnviroment()
{
Program.settings = ProgramSettings.GetSettingsFromConsole();
ExponentialDistribution.SetupExponentialDistribution(settings.meanValue);
EvolutionModel kimuraModel = new EvolutionModel(settings.alpha, settings.beta);
DnaSequenceEvolver.SetupEvolver(kimuraModel);
NodeEvolutionScheduler.SetupScheduler(settings.evolutionTime);
//
// Setup main evolution timer but don't enable it yet as there is no telling how long will it take the user to input sequence
//
Program.evolutionTimer = new Timer(settings.evolutionTime);
Program.evolutionTimer.Elapsed += new ElapsedEventHandler(Program.EvolutionEndCallback);
Program.evolutionTimer.AutoReset = false;
}
public static void SetupEvolver(EvolutionModel model)
{
DnaSequenceEvolver.evolver = new DnaSequenceEvolver(model);
}
private DnaSequenceEvolver(EvolutionModel evolutionModel)
{
this.evolutionModel = evolutionModel;
}