public void NextEpochShouldFireNextEpochEvent()
{
var c = new Controller();
c.Clock = new FakeClock();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List <IMeasurement> {
new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V")
};
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string)"ID1",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
bool evt = false;
c.NextEpochRequested += (sender, args) => evt = true;
c.NextEpoch();
Assert.True(evt);
}
public void IsIndefiniteIfAnyStimulusIsIndefinite()
{
Epoch e = new Epoch("");
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(1.0m, "units"));
var dev2 = new UnitConvertingExternalDevice("name2", "co", new Measurement(1.0m, "units"));
Assert.That(e.IsIndefinite, Is.False);
e.Stimuli[dev2] = new DelegatedStimulus("stimID", "units",
new Dictionary <string, object>(),
(p, b) => null,
(p) => Option <TimeSpan> .Some(TimeSpan.FromMilliseconds(100)));
Assert.That(e.IsIndefinite, Is.False);
e.Stimuli[dev] = new DelegatedStimulus("stimID", "units",
new Dictionary <string, object>(),
(p, b) => null,
(p) => Option <TimeSpan> .None());
Assert.That(e.IsIndefinite, Is.True);
e.Stimuli.Clear();
Assert.That(e.IsIndefinite, Is.False);
}
public void ExternalDeviceStreams()
{
var ed = new UnitConvertingExternalDevice("TestDevice", UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
DAQInputStream in0 = new DAQInputStream("In-0");
DAQOutputStream out0 = new DAQOutputStream("Out-0");
ed.BindStream(in0).BindStream(out0);
Assert.IsTrue(ed.Streams.ContainsKey(in0.Name));
Assert.IsTrue(in0.Devices.Contains(ed));
Assert.IsTrue(ed.Streams.ContainsKey(out0.Name));
Assert.IsTrue(out0.Device == ed);
ed.UnbindStream("In-0");
Assert.IsFalse(ed.Streams.ContainsKey(in0.Name));
Assert.IsFalse(in0.Devices.Contains(ed));
Assert.IsTrue(ed.Streams.ContainsKey(out0.Name));
Assert.IsTrue(out0.Device == ed);
ed.UnbindStream("Out-0");
Assert.IsFalse(ed.Streams.ContainsKey(in0.Name));
Assert.IsFalse(in0.Devices.Contains(ed));
Assert.IsFalse(ed.Streams.ContainsKey(out0.Name));
Assert.IsFalse(out0.Device == ed);
}
public void ShouldPushOutputDataConfigurationToStimuli()
{
var e = new Epoch(UNUSED_PROTOCOL_ID);
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(0m, "units"));
const string units = "units";
var data = new OutputData(Enumerable.Repeat(new Measurement(0, units), 100), new Measurement(10, "Hz"));
var s = new RenderedStimulus((string)"stimID", (IDictionary <string, object>) new Dictionary <string, object>(), (IOutputData)data);
e.Stimuli[dev] = s;
var configuration = new List <IPipelineNodeConfiguration>();
var config = new Dictionary <string, object>();
config["key"] = "value";
configuration.Add(new PipelineNodeConfiguration("NODE1", config));
var outputTime = DateTimeOffset.Now;
e.DidOutputData(dev, outputTime, data.Duration, configuration);
var expected = configuration;
Assert.That(e.Stimuli[dev].OutputConfigurationSpans.First().Nodes, Is.EqualTo(expected));
Assert.That(e.Stimuli[dev].OutputConfigurationSpans.First().Time, Is.EqualTo(data.Duration));
}
public void RunEpochThrowsGivenEpochWithInconsistentStimulusDurations()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev1", "co", c, new Measurement(0, "V"));
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev1] = new RenderedStimulus((string)"ID1",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData) new OutputData(new List <IMeasurement> {
new Measurement(1, "V")
},
sampleRate, true));
e.Stimuli[dev2] = new RenderedStimulus((string)"ID2",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData) new OutputData(new List <IMeasurement> {
new Measurement(1, "V"), new Measurement(1, "V")
},
sampleRate, true));
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf <ArgumentException>());
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "V",
new Dictionary <string, object>(),
(x, y) => null,
(p) => Option <TimeSpan> .None());
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf <ArgumentException>());
}
public void DoesNotPushStimulusConfigurationSpansToCompletedEpochs()
{
const string UNUSED_NAME = "UNUSED";
var c = new SingleEpochController();
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
var outputTime = DateTimeOffset.Now;
var configuration = new List <IPipelineNodeConfiguration>();
var config = new Dictionary <string, object>();
config["key"] = "value";
configuration.Add(new PipelineNodeConfiguration(UNUSED_NAME, config));
var epochMock = new Mock <Epoch>("test-epoch");
epochMock.Setup(epoch => epoch.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration));
epochMock.Setup(epoch => epoch.IsComplete).Returns(true);
c.SetCurrentEpoch(epochMock.Object);
c.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration);
epochMock.Verify(epoch => epoch.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration), Times.AtMost(0));
}
public void ShouldTruncateResponseAtEpochBoundary()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List <IMeasurement> {
new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V")
};
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string)"ID1",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
c.NextEpoch();
c.PushInputData(dev1, new InputData(samples.Concat(samples).ToList(),
sampleRate,
DateTimeOffset.Now)
.DataWithStreamConfiguration(streamFake, new Dictionary <string, object>())
.DataWithExternalDeviceConfiguration(devFake, new Dictionary <string, object>()));
Assert.That(((TimeSpan)e.Responses[dev1].Duration), Is.EqualTo((TimeSpan)e.Duration));
}
public void IsIndefiniteIfAnyStimulusIsIndefinite()
{
Epoch e = new Epoch("");
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(1.0m, "units"));
var dev2 = new UnitConvertingExternalDevice("name2", "co", new Measurement(1.0m, "units"));
Assert.That(e.IsIndefinite, Is.False);
e.Stimuli[dev2] = new DelegatedStimulus("stimID", "units", new Measurement(1000, "Hz"),
new Dictionary<string, object>(),
(p, b) => null,
(p) => Option<TimeSpan>.Some(TimeSpan.FromMilliseconds(100)));
Assert.That(e.IsIndefinite, Is.False);
e.Stimuli[dev] = new DelegatedStimulus("stimID", "units", new Measurement(1000, "Hz"),
new Dictionary<string, object>(),
(p, b) => null,
(p) => Option<TimeSpan>.None());
Assert.That(e.IsIndefinite, Is.True);
e.Stimuli.Clear();
Assert.That(e.IsIndefinite, Is.False);
}
public void NexEpochShouldDequeueEpoch()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List <IMeasurement> {
new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V")
};
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string)"ID1",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
Assert.That(c.CurrentEpoch, Is.Null);
c.NextEpoch();
Assert.That(c.CurrentEpoch, Is.EqualTo(e));
}
public void NextEpochThrowsIfCannotDequeue()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List <IMeasurement> {
new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V")
};
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string)"ID1",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
c.NextEpoch();
Assert.Throws <SymphonyControllerException>(() => c.NextEpoch());
}
public void PushesDataToEpoch()
{
const string UNUSED_NAME = "UNUSED";
var c = new SingleEpochController();
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev);
var srate = new Measurement(100, "Hz");
var samples = Enumerable.Range(0, 100).Select(i => new Measurement(1, "V")).ToList();
var e = new Epoch("PushesDataToEpoch");
e.Responses[dev] = new Response();
e.Stimuli[dev] = new RenderedStimulus((string)"ID1", (IDictionary <string, object>) new Dictionary <string, object>(), (IOutputData) new OutputData(samples, srate, false));
c.SetCurrentEpoch(e);
var streamFake = new DAQInputStream("StreamFake");
var data = new InputData(samples, srate, DateTimeOffset.Now)
.DataWithStreamConfiguration(streamFake, new Dictionary <string, object>());
c.PushInputData(dev, data);
Assert.That(e.Responses[dev].Data, Is.EqualTo(data.Data));
Assert.That(e.Responses[dev].InputTime, Is.EqualTo(data.InputTime));
Assert.That(e.Responses[dev].DataConfigurationSpans.First().Nodes.First(),
Is.EqualTo(data.NodeConfigurationWithName(streamFake.Name)));
}
public void ShouldNotPersistEpochGivenNullPersistor()
{
var c = new Controller();
bool evt = false;
c.DAQController = new TestDAQController();
c.Clock = c.DAQController as IClock;
c.DiscardedEpoch += (co, args) => Assert.Fail("Run failed");
var dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
Controller = c,
MeasurementConversionTarget = "V"
};
var outStream = new DAQOutputStream("outStream")
{
MeasurementConversionTarget = "V"
};
var inStream = new DAQInputStream("inStream")
{
MeasurementConversionTarget = "V"
};
(c.DAQController as IMutableDAQController).AddStream(outStream);
(c.DAQController as IMutableDAQController).AddStream(inStream);
var srate = new Measurement(10, "Hz");
outStream.SampleRate = srate;
inStream.SampleRate = srate;
dev.BindStream(outStream);
dev.BindStream(inStream);
var e = new Epoch(UNUSED_PROTOCOL);
var samples = new List <IMeasurement> {
new Measurement(1.0m, "V"), new Measurement(1.0m, "V"), new Measurement(1.0m, "V")
};
var data = new OutputData(samples,
srate,
true);
e.Stimuli[dev] = new RenderedStimulus((string)"stimID",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev] = new Response();
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), srate);
((TestDAQController)c.DAQController).AddStreamMapping(outStream, inStream);
c.RunEpoch(e, null);
Assert.Pass();
}
public void ShouldSurfaceExceptionInPersistorTask()
{
var c = new Controller();
bool evt = false;
c.DAQController = new TestDAQController();
c.Clock = c.DAQController as IClock;
var persistor = new AggregateExceptionThrowingEpochPersistor();
c.SavedEpoch += (co, args) =>
{
evt = true;
};
var dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
Controller = c,
MeasurementConversionTarget = "V"
};
var outStream = new DAQOutputStream("outStream")
{
MeasurementConversionTarget = "V"
};
var inStream = new DAQInputStream("inStream")
{
MeasurementConversionTarget = "V"
};
(c.DAQController as IMutableDAQController).AddStream(outStream);
(c.DAQController as IMutableDAQController).AddStream(inStream);
var srate = new Measurement(10, "Hz");
outStream.SampleRate = srate;
inStream.SampleRate = srate;
dev.BindStream(outStream);
dev.BindStream(inStream);
var e = new Epoch(UNUSED_PROTOCOL);
var samples = new List <IMeasurement> {
new Measurement(1.0m, "V"), new Measurement(1.0m, "V"), new Measurement(1.0m, "V")
};
var data = new OutputData(samples,
srate,
true);
e.Stimuli[dev] = new RenderedStimulus((string)"stimID",
(IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData)data);
e.Responses[dev] = new Response();
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), srate);
((TestDAQController)c.DAQController).AddStreamMapping(outStream, inStream);
Assert.That(() => c.RunEpoch(e, persistor), Throws.TypeOf <SymphonyControllerException>());
}
public void EmptyNameShouldFailValidation()
{
var e = new UnitConvertingExternalDevice("", UNUSED_NAME, new Measurement(0, "V"));
Assert.That((bool)e.Validate(), Is.False);
e = new UnitConvertingExternalDevice(null, UNUSED_NAME, new Measurement(0, "V"));
Assert.That((bool)e.Validate(), Is.False);
}
public void OutputPipelineContinuity(
[Values(1000, 5000, 10000, 15000, 20000)] double sampleRate,
[Values(0.1, 0.5, 1, 5)] double blockDurationSeconds
)
{
const double epochDuration = 2; //seconds
var srate = new Measurement((decimal) sampleRate, "Hz");
var daq = new TestDAQController();
var outStream = new DAQOutputStream("OUT")
{
SampleRate = srate,
MeasurementConversionTarget = "V"
};
var inStream = new DAQInputStream("IN")
{
SampleRate = srate,
MeasurementConversionTarget = "V"
};
var controller = new Controller() { Clock = daq, DAQController = daq };
var dev = new UnitConvertingExternalDevice("dev", "co", controller, new Measurement(0, "V"))
{
Clock = daq,
MeasurementConversionTarget = "V",
OutputSampleRate = srate,
InputSampleRate = srate
};
dev.BindStream(outStream).BindStream(inStream);
// Setup Epoch
var e = new Epoch("OutputPipelineContinuity");
var nSamples = (int)TimeSpan.FromSeconds(epochDuration).Samples(srate);
IList<IMeasurement> stimData = (IList<IMeasurement>) Enumerable.Range(0, nSamples)
.Select(i => new Measurement((decimal) (8 * Math.Sin(((double)i) / (nSamples / 10.0))), "V") as IMeasurement)
.ToList();
IOutputData stimOutputData = new OutputData(stimData, srate);
var stim = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) new Dictionary<string, object>(),
stimOutputData);
e.Stimuli[dev] = stim;
e.Responses[dev] = new Response();
e.Backgrounds[dev] = new Background(new Measurement(0, "V"), srate);
controller.EnqueueEpoch(e);
var blockSpan = TimeSpan.FromSeconds(blockDurationSeconds);
foreach (var stimBlock in stim.DataBlocks(blockSpan))
{
var cons = stimOutputData.SplitData(blockSpan);
var expected = cons.Head.Data;
stimOutputData = cons.Rest;
Assert.That(stimBlock.Data, Is.EqualTo(expected));
}
}
public void EmptyManufacturerShouldFailValidation()
{
var e = new UnitConvertingExternalDevice(UNUSED_NAME, "", new Measurement(0, "V"));
Assert.That((bool)e.Validate(), Is.False);
e = new UnitConvertingExternalDevice(UNUSED_NAME, null, new Measurement(0, "V"));
Assert.That((bool)e.Validate(), Is.False);
}
public void PreventsDuplicateExternalDeviceNames()
{
Controller c = new Controller();
const string UNUSED_NAME = "UNUSED";
var dev1 = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
var dev2 = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev1).AddDevice(dev2);
}
public void ShouldRaiseExceptionIfPullingLessThanOneSample()
{
var e = new UnitConvertingExternalDevice(UNUSED_NAME, null, new Measurement(0, "V"));
var stream = new DAQOutputStream(UNUSED_NAME);
e.BindStream(stream);
stream.SampleRate = new Measurement(1, "Hz");
Assert.Throws <ExternalDeviceException>(() => e.PullOutputData(stream, TimeSpan.FromMilliseconds(0.1)));
}
public void OutputPipelineContinuity(
[Values(1000, 5000, 10000, 15000, 20000)] double sampleRate,
[Values(0.1, 0.5, 1, 5)] double blockDurationSeconds
)
{
const double epochDuration = 2; //seconds
var srate = new Measurement((decimal) sampleRate, "Hz");
var daq = new TestDAQController();
var outStream = new DAQOutputStream("OUT")
{
SampleRate = srate,
MeasurementConversionTarget = "V"
};
var controller = new Controller() { Clock = daq, DAQController = daq };
var dev = new UnitConvertingExternalDevice("dev", "co", controller, new Measurement(0, "V"))
{
Clock = daq,
MeasurementConversionTarget = "V"
};
dev.BindStream(outStream);
// Setup Epoch
var e = new Epoch("OutputPipelineContinuity");
var nSamples = (int)TimeSpan.FromSeconds(epochDuration).Samples(srate);
IList<IMeasurement> stimData = (IList<IMeasurement>) Enumerable.Range(0, nSamples)
.Select(i => new Measurement((decimal) (8 * Math.Sin(((double)i) / (nSamples / 10.0))), "V") as IMeasurement)
.ToList();
IOutputData stimOutputData = new OutputData(stimData, srate);
var stim = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) new Dictionary<string, object>(),
stimOutputData);
e.Stimuli[dev] = stim;
e.Responses[dev] = new Response();
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), srate);
controller.EnqueueEpoch(e);
controller.NextEpoch();
var blockSpan = TimeSpan.FromSeconds(blockDurationSeconds);
foreach (var stimBlock in stim.DataBlocks(blockSpan))
{
var cons = stimOutputData.SplitData(blockSpan);
var expected = cons.Head.Data;
stimOutputData = cons.Rest;
Assert.That(stimBlock.Data, Is.EqualTo(expected));
}
}
public void GetDeivceReturnsDevice()
{
Controller c = new Controller();
const string DEVICE_NAME = "DEVICE";
var dev1 = new UnitConvertingExternalDevice(DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev1);
Assert.AreEqual(dev1, c.GetDevice(DEVICE_NAME));
}
public void BackgroundProxiesExternalDevice()
{
var background = new Measurement(1.3m, "units");
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, background)
{
MeasurementConversionTarget = "units"
};
var stream = new DAQOutputStream(UNUSED_NAME);
stream.Device = dev;
Assert.AreEqual(background.QuantityInBaseUnit, stream.Background.QuantityInBaseUnit);
}
public void ShouldAllowBackgroundChanagesAfterConstruction()
{
const string units = "xyz";
var device = new UnitConvertingExternalDevice("dev", "manufacturer", new Measurement(0, units)) { MeasurementConversionTarget = units };
var expected = new Measurement(123, units);
device.Background = expected;
Assert.That(device.Background, Is.EqualTo(expected));
Assert.That(device.OutputBackground, Is.EqualTo(expected));
}
public void BackgroundProxiesExternalDevice()
{
var background = new Measurement(1.3m, "units");
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, background)
{
MeasurementConversionTarget = "units"
};
var stream = new DAQOutputStream(UNUSED_NAME);
stream.Device = dev;
Assert.AreEqual(background.QuantityInBaseUnit, stream.Background.QuantityInBaseUnit);
}
public void DurationsSumUpCorrectly()
{
Epoch e = new Epoch("Protocol");
var ed = new UnitConvertingExternalDevice("TEST-DEVICE", "DEVICE-CO", new Measurement(0, "V"));
IMeasurement UNUSED_SRATE = new Measurement(1000, "Hz");
e.Stimuli[ed] = new RenderedStimulus((string)"RenderedStimulus", (IDictionary <string, object>) new Dictionary <string, object>(),
(IOutputData) new OutputData(new Measurement[] {
new Measurement(0, "units"),
new Measurement(1, "units")
}.ToList(), UNUSED_SRATE, false));
// More to do here (later)
}
public void DurationsSumUpCorrectly()
{
Epoch e = new Epoch("Protocol");
var ed = new UnitConvertingExternalDevice("TEST-DEVICE", "DEVICE-CO", new Measurement(0, "V"));
IMeasurement UNUSED_SRATE = new Measurement(1000, "Hz");
e.Stimuli[ed] = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) new OutputData(new Measurement[] {
new Measurement(0, "units"),
new Measurement(1, "units")
}.ToList(), UNUSED_SRATE, false));
// More to do here (later)
}
public void ShouldAllowBackgroundChanagesAfterConstruction()
{
const string units = "xyz";
var device = new UnitConvertingExternalDevice("dev", "manufacturer", new Measurement(0, units))
{
MeasurementConversionTarget = units
};
var expected = new Measurement(123, units);
device.Background = expected;
Assert.That(device.Background, Is.EqualTo(expected));
Assert.That(device.OutputBackground, Is.EqualTo(expected));
}
public void RunEpochThrowsGivenIndefiniteEpochWithResponses()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "units",
new Dictionary <string, object>(),
(x, y) => null,
(p) => Option <TimeSpan> .None());
e.Responses[dev2] = new Response();
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf <ArgumentException>());
}
public void RunEpochShouldDiscardEpochWhenCancelEpochCalled()
{
Converters.Register("V", "V",
// just an identity conversion for now, to pass Validate()
(IMeasurement m) => m);
var c = new Controller {
DAQController = new SimpleDAQController2()
};
c.DAQController.Clock = c.DAQController as IClock;
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev1", "co", c, new Measurement(0, "V"))
{
MeasurementConversionTarget = "V",
Clock = c.Clock
};
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev1] = new DelegatedStimulus("ID1", "units", new Dictionary <string, object>(),
(parameters, duration) =>
new OutputData(new List <IMeasurement>(), sampleRate, false),
objects => Option <TimeSpan> .None());
bool epochDiscarded = false;
c.DiscardedEpoch += (sender, args) =>
{
epochDiscarded = true;
};
c.DAQController.ProcessIteration += (o, eventArgs) =>
{
Console.WriteLine("Process iteration");
c.CancelEpoch();
};
c.RunEpoch(e, new FakeEpochPersistor());
Assert.True(epochDiscarded);
}
public void PullOutputDataShouldReturnNullWithNullCurrentEpoch()
{
Controller c = new Controller();
IExternalDevice dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, c, UNUSED_BACKGROUND);
IList <IMeasurement> data = (IList <IMeasurement>)Enumerable.Range(0, 1000).Select(i => new Measurement(i, "V") as IMeasurement).ToList();
var sampleRate = new Measurement(1000, "Hz");
IOutputData data1 = new OutputData(data, sampleRate, false);
var e = new Epoch("");
e.Stimuli[dev] = new RenderedStimulus((string)"RenderedStimulus", (IDictionary <string, object>) new Dictionary <string, object>(),
data1);
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), sampleRate);
Assert.Null(c.PullOutputData(dev, TimeSpan.FromSeconds(1)));
}
public void PullOutputDataShouldThrowForMissingDevice()
{
var e = new Epoch(UNUSED_PROTOCOL_ID);
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(1.0m, "units"));
ArgumentException caught = null;
try
{
e.PullOutputData(dev, TimeSpan.FromMilliseconds(100));
}
catch (ArgumentException ex)
{
caught = ex;
}
Assert.That(caught, Is.Not.Null);
}
public void ConcatThrowsWithEitherExternalDeviceConfiguration()
{
IMeasurement srate = new Measurement(1000, "Hz");
IOutputData outData1 = new OutputData(this.Data,
srate, false);
IOutputData outData2 = new OutputData(this.Data,
srate, false);
Assert.DoesNotThrow(() => outData1.Concat(outData2));
var dev = new UnitConvertingExternalDevice("DevName", "DevManufacturer", new Measurement(0, "V"));
var outData3 = outData1.DataWithExternalDeviceConfiguration(dev, new Dictionary <string, object>());
Assert.Throws <ArgumentException>(() => outData3.Concat(outData2));
Assert.Throws <ArgumentException>(() => outData2.Concat(outData3));
}
public void PullsOutputData()
{
var c = new Controller();
IExternalDevice dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, c, UNUSED_BACKGROUND);
const int srate = 1000;
IList <IMeasurement> data = (IList <IMeasurement>)Enumerable.Range(0, srate * 2).Select(i => new Measurement(i, "V") as IMeasurement).ToList();
var sampleRate = new Measurement(srate, "Hz");
IOutputData data1 = new OutputData(data, sampleRate, false);
var e = new Epoch("");
e.Stimuli[dev] = new RenderedStimulus((string)"RenderedStimulus", (IDictionary <string, object>) new Dictionary <string, object>(),
data1);
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), sampleRate);
c.EnqueueEpoch(e);
TimeSpan d1 = TimeSpan.FromSeconds(0.75);
c.EnqueueEpoch(e);
c.NextEpoch();
var pull1 = c.PullOutputData(dev, d1);
var pull2 = c.PullOutputData(dev, d1);
var samples = (int)d1.Samples(new Measurement(srate, "Hz"));
Assert.AreEqual(data.Take(samples).ToList(),
pull1.Data);
Assert.AreEqual(data.Skip(samples).Take(samples).ToList(),
pull2.Data);
var pull3 = c.PullOutputData(dev, d1);
Assert.AreEqual(data.Skip(2 * samples)
.Take(samples)
.Concat(Enumerable.Range(0, srate - samples).Select(i => e.Background[dev].Background))
.ToList(),
pull3.Data);
}
private static void OrderedFakeInputData(out IInputData d1, out IInputData d2)
{
Random random = new Random();
IList <IMeasurement> data = (IList <IMeasurement>)Enumerable.Repeat(0, 100).Select(i => random.Next()).Select(v => new Measurement(v, "V") as IMeasurement).ToList();;//generate random data
IMeasurement srate = new Measurement(1000, "Hz");
DateTimeOffset time1 = DateTimeOffset.Now;
IDictionary <string, object> config = new Dictionary <string, object>();
var dev = new UnitConvertingExternalDevice("DevName", "DevManufacturer", new Measurement(0, "V"));
var stream = new DAQOutputStream("StreamName");
d1 = new InputData(data, srate, time1)
.DataWithExternalDeviceConfiguration(dev, config)
.DataWithStreamConfiguration(stream, config);
DateTimeOffset time2 = time1.AddSeconds((double)(data.Count / srate.Quantity));
d2 = new InputData(data, srate, time2)
.DataWithExternalDeviceConfiguration(dev, config)
.DataWithStreamConfiguration(stream, config);
}
public void PullOuputDataShouldReturnBackgroundWhenNoStimulusRegisteredForDevice()
{
var e = new Epoch(UNUSED_PROTOCOL_ID);
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(1.0m, "units"));
var bg = new Measurement(1.1m, "units");
e.Background[dev] = new Epoch.EpochBackground(bg, new Measurement(1000, "Hz"));
var duration = TimeSpan.FromSeconds(1.1);
var data = e.PullOutputData(dev, duration);
Assert.That(data.Duration, Is.EqualTo(duration));
Assert.That(data.Data.All(m => m.BaseUnit == bg.BaseUnit));
foreach (var m in data.Data)
{
Assert.That(m.QuantityInBaseUnit, Is.EqualTo(bg.QuantityInBaseUnit).Within(0.0001));
}
Assert.That(data.Data.All(m => m.QuantityInBaseUnit == bg.QuantityInBaseUnit));
}
public void ShouldConvertBackgoundUnits()
{
Converters.Register("xfromUnits", "toUnits", m => new Measurement(2 * m.Quantity, m.Exponent, m.BaseUnit));
var bg = new Measurement(1, "xfromUnits");
var e = new UnitConvertingExternalDevice(UNUSED_NAME,
null,
bg)
{
MeasurementConversionTarget = "toUnits"
};
var stream = new DAQOutputStream(UNUSED_NAME);
e.BindStream(stream);
var expected = new Measurement(bg.Quantity * 2,
bg.Exponent,
bg.BaseUnit);
Assert.That(e.OutputBackground, Is.EqualTo(expected));
}
public void ShouldConvertBackgoundUnits()
{
Converters.Register("xfromUnits", "toUnits", m => new Measurement(2 * m.Quantity, m.Exponent, m.BaseUnit));
var bg = new Measurement(1, "xfromUnits");
var e = new UnitConvertingExternalDevice(UNUSED_NAME,
null,
bg)
{
MeasurementConversionTarget = "toUnits"
};
var stream = new DAQOutputStream(UNUSED_NAME);
e.BindStream(stream);
var expected = new Measurement(bg.Quantity * 2,
bg.Exponent,
bg.BaseUnit);
Assert.That(e.OutputBackground, Is.EqualTo(expected));
}
public void EpochValidates()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "units",
new Dictionary <string, object>(),
(x, y) => null,
(p) => Option <TimeSpan> .None());
try
{
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Nothing);
}
catch (Exception)
{
//pass
}
}
public void ShouldTruncateResponseAtEpochBoundary()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List<IMeasurement> { new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V") };
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string) "ID1",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
c.NextEpoch();
c.PushInputData(dev1, new InputData(samples.Concat(samples).ToList(),
sampleRate,
DateTimeOffset.Now)
.DataWithStreamConfiguration(streamFake, new Dictionary<string, object>())
.DataWithExternalDeviceConfiguration(devFake, new Dictionary<string, object>()));
Assert.That(((TimeSpan)e.Responses[dev1].Duration), Is.EqualTo((TimeSpan)e.Duration));
}
private static void OrderedFakeInputData(out IInputData d1, out IInputData d2)
{
Random random = new Random();
IList<IMeasurement> data = (IList<IMeasurement>) Enumerable.Repeat(0, 100).Select(i => random.Next()).Select(v => new Measurement(v, "V") as IMeasurement).ToList(); ;//generate random data
IMeasurement srate = new Measurement(1000, "Hz");
DateTimeOffset time1 = DateTimeOffset.Now;
IDictionary<string, object> config = new Dictionary<string, object>();
var dev = new UnitConvertingExternalDevice("DevName", "DevManufacturer", new Measurement(0, "V"));
var stream = new DAQOutputStream("StreamName");
d1 = new InputData(data, srate, time1)
.DataWithExternalDeviceConfiguration(dev, config)
.DataWithStreamConfiguration(stream, config);
DateTimeOffset time2 = time1.AddSeconds((double) (data.Count / srate.Quantity));
d2 = new InputData(data, srate, time2)
.DataWithExternalDeviceConfiguration(dev, config)
.DataWithStreamConfiguration(stream, config);
}
public void PreventsDuplicateExternalDeviceNames()
{
Controller c = new Controller();
const string UNUSED_NAME = "UNUSED";
var dev1 = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
var dev2 = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev1).AddDevice(dev2);
}
public void ShouldSurfaceExceptionInPersistorTask()
{
var c = new Controller();
bool evt = false;
c.DAQController = new TestDAQController();
c.Clock = c.DAQController as IClock;
var persistor = new AggregateExceptionThrowingEpochPersistor();
c.SavedEpoch += (co, args) =>
{
evt = true;
};
var dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
Controller = c,
MeasurementConversionTarget = "V"
};
var outStream = new DAQOutputStream("outStream") { MeasurementConversionTarget = "V" };
var inStream = new DAQInputStream("inStream") { MeasurementConversionTarget = "V" };
(c.DAQController as IMutableDAQController).AddStream(outStream);
(c.DAQController as IMutableDAQController).AddStream(inStream);
var srate = new Measurement(10, "Hz");
outStream.SampleRate = srate;
inStream.SampleRate = srate;
dev.BindStream(outStream);
dev.BindStream(inStream);
var e = new Epoch(UNUSED_PROTOCOL);
var samples = new List<IMeasurement> { new Measurement(1.0m, "V"), new Measurement(1.0m, "V"), new Measurement(1.0m, "V") };
var data = new OutputData(samples,
srate,
true);
e.Stimuli[dev] = new RenderedStimulus((string) "stimID",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev] = new Response();
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), srate);
((TestDAQController)c.DAQController).AddStreamMapping(outStream, inStream);
Assert.That(() => c.RunEpoch(e, persistor), Throws.TypeOf<SymphonyControllerException>());
}
public void ExternalDeviceStreams()
{
var ed = new UnitConvertingExternalDevice("TestDevice", UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
DAQInputStream in0 = new DAQInputStream("In-0");
DAQOutputStream out0 = new DAQOutputStream("Out-0");
ed.BindStream(in0).BindStream(out0);
Assert.IsTrue(ed.Streams.ContainsKey(in0.Name));
Assert.IsTrue(in0.Devices.Contains(ed));
Assert.IsTrue(ed.Streams.ContainsKey(out0.Name));
Assert.IsTrue(out0.Device == ed);
ed.UnbindStream("In-0");
Assert.IsFalse(ed.Streams.ContainsKey(in0.Name));
Assert.IsFalse(in0.Devices.Contains(ed));
Assert.IsTrue(ed.Streams.ContainsKey(out0.Name));
Assert.IsTrue(out0.Device == ed);
ed.UnbindStream("Out-0");
Assert.IsFalse(ed.Streams.ContainsKey(in0.Name));
Assert.IsFalse(in0.Devices.Contains(ed));
Assert.IsFalse(ed.Streams.ContainsKey(out0.Name));
Assert.IsFalse(out0.Device == ed);
}
public void EpochValidates()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "units",
new Dictionary<string, object>(),
(x, y) => null,
(p) => Option<TimeSpan>.None());
try
{
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Nothing);
}
catch (Exception)
{
//pass
}
}
public void NextEpochShouldFireNextEpochEvent()
{
var c = new Controller();
c.Clock = new FakeClock();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List<IMeasurement> { new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V") };
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string) "ID1",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
bool evt = false;
c.NextEpochRequested += (sender, args) => evt = true;
c.NextEpoch();
Assert.True(evt);
}
public void MaybeHasStartTime()
{
Epoch e = new Epoch("");
Assert.False(e.StartTime);
var dev = new UnitConvertingExternalDevice("name", "co", new Measurement(1.0m, "units"));
var stim = new DelegatedStimulus("stimID", "units", new Measurement(1000, "Hz"),
new Dictionary<string, object>(),
(p, b) => null,
(p) => Option<TimeSpan>.None());
e.Stimuli[dev] = stim;
var expected = DateTimeOffset.Now;
stim.DidOutputData(expected, TimeSpan.FromSeconds(1), null);
Assert.AreEqual(expected, (DateTimeOffset)e.StartTime);
}
public void PushesDataToEpoch()
{
const string UNUSED_NAME = "UNUSED";
var c = new SingleEpochController();
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev);
var srate = new Measurement(100, "Hz");
var samples = Enumerable.Range(0, 100).Select(i => new Measurement(1, "V")).ToList();
var e = new Epoch("PushesDataToEpoch");
e.Responses[dev] = new Response();
e.Stimuli[dev] = new RenderedStimulus((string) "ID1", (IDictionary<string, object>) new Dictionary<string, object>(), (IOutputData) new OutputData(samples, srate, false));
c.SetCurrentEpoch(e);
var streamFake = new DAQInputStream("StreamFake");
var data = new InputData(samples, srate, DateTimeOffset.Now)
.DataWithStreamConfiguration(streamFake, new Dictionary<string, object>());
c.PushInputData(dev, data);
Assert.That(e.Responses[dev].Data, Is.EqualTo(data.Data));
Assert.That(e.Responses[dev].InputTime, Is.EqualTo(data.InputTime));
Assert.That(e.Responses[dev].DataConfigurationSpans.First().Nodes.First(),
Is.EqualTo(data.NodeConfigurationWithName(streamFake.Name)));
}
public void PushesStimulusConfigurationSpansToEpoch()
{
const string UNUSED_NAME = "UNUSED";
var c = new SingleEpochController();
var dev = new UnitConvertingExternalDevice(UNUSED_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
var outputTime = DateTimeOffset.Now;
var configuration = new List<IPipelineNodeConfiguration>();
var config = new Dictionary<string, object>();
config["key"] = "value";
configuration.Add(new PipelineNodeConfiguration(UNUSED_NAME, config));
var epochMock = new Mock<Epoch>("test-epoch");
epochMock.Setup(epoch => epoch.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration)).AtMostOnce();
epochMock.Setup(epoch => epoch.IsComplete).Returns(false);
c.SetCurrentEpoch(epochMock.Object);
c.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration);
epochMock.Verify(epoch => epoch.DidOutputData(dev, outputTime, TimeSpan.FromSeconds(0.1), configuration));
}
public void PullsOutputData()
{
var c = new Controller();
IExternalDevice dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, c, UNUSED_BACKGROUND);
const int srate = 1000;
IList<IMeasurement> data = (IList<IMeasurement>) Enumerable.Range(0, srate * 2).Select(i => new Measurement(i, "V") as IMeasurement).ToList();
var sampleRate = new Measurement(srate, "Hz");
IOutputData data1 = new OutputData(data, sampleRate, false);
var e = new Epoch("");
e.Stimuli[dev] = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) new Dictionary<string, object>(),
data1);
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), sampleRate);
c.EnqueueEpoch(e);
TimeSpan d1 = TimeSpan.FromSeconds(0.75);
c.EnqueueEpoch(e);
c.NextEpoch();
var pull1 = c.PullOutputData(dev, d1);
var pull2 = c.PullOutputData(dev, d1);
var samples = (int)d1.Samples(new Measurement(srate, "Hz"));
Assert.AreEqual(data.Take(samples).ToList(),
pull1.Data);
Assert.AreEqual(data.Skip(samples).Take(samples).ToList(),
pull2.Data);
var pull3 = c.PullOutputData(dev, d1);
Assert.AreEqual(data.Skip(2 * samples)
.Take(samples)
.Concat(Enumerable.Range(0, srate - samples).Select(i => e.Background[dev].Background))
.ToList(),
pull3.Data);
}
public void CreatePipeline()
{
// Based on the "Minimal Rig.pdf" in the docs folder
Converters.Clear();
// We need an IClock
IClock clock = new FakeClock();
// We need a controller ...
Controller con = new Controller();
Converters.Register("units", "units",
// just an identity conversion for now, to pass Validate()
(IMeasurement m) => m);
Converters.Register("V", "units",
// just an identity conversion for now, to pass Validate()
(IMeasurement m) => m);
con.Clock = clock;
// Three ExternalDevices
CoalescingDevice amp = new CoalescingDevice("Amp", UNUSED_DEVICE_MANUFACTURER, con, UNUSED_BACKGROUND)
{
MeasurementConversionTarget = "units"
};
var LED = new UnitConvertingExternalDevice("LED", UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
MeasurementConversionTarget = "units"
};
var temp = new UnitConvertingExternalDevice("Temp", UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
MeasurementConversionTarget = "units"
};
amp.Clock = clock;
LED.Clock = clock;
temp.Clock = clock;
con.AddDevice(LED).AddDevice(temp);
// There should be no difference whether we use the
// ExternalDevice constructor to wire up the Controller
// to the ExternalDevice, or the explicit Add() call
Assert.IsNotNull(amp.Controller);
Assert.IsNotNull(LED.Controller);
Assert.IsNotNull(temp.Controller);
Assert.IsTrue(amp.Controller == con);
Assert.IsTrue(LED.Controller == con);
Assert.IsTrue(temp.Controller == con);
// Five DAQStreams
DAQInputStream in0 = new DAQInputStream("In-0"); in0.Clock = clock;
DAQInputStream in1 = new DAQInputStream("In-1"); in1.Clock = clock;
DAQInputStream in2 = new DAQInputStream("In-2"); in2.Clock = clock;
DAQOutputStream out0 = new DAQOutputStream("Out-0"); out0.Clock = clock;
DAQOutputStream out1 = new DAQOutputStream("Out-1"); out1.Clock = clock;
in0.MeasurementConversionTarget = "units";
in1.MeasurementConversionTarget = "units";
in2.MeasurementConversionTarget = "units";
out0.MeasurementConversionTarget = "units";
out1.MeasurementConversionTarget = "units";
//amp.Coalesce = CoalescingDevice.OneItemCoalesce;
amp.Configuration["CoalesceProc"] = "Symphony.Core.CoalescingDevice.OneItemCoalesce";
LED.BindStream(out0);
amp.BindStream(out1).BindStream(in0).BindStream(in1);
amp.Connect(in0, in1);
temp.BindStream(in2);
Assert.IsTrue(LED.Streams.Count == 1);
Assert.IsTrue(amp.Streams.Count == 3);
Assert.IsTrue(temp.Streams.Count == 1);
Assert.IsTrue(in0.Devices.Contains(amp));
Assert.IsTrue(in1.Devices.Contains(amp));
Assert.IsTrue(in2.Devices.Contains(temp));
Assert.IsTrue(out0.Device == LED);
Assert.IsTrue(out1.Device == amp);
// One DAQController
IDAQController dc =
new SimpleDAQController(new IDAQStream[] { in0, in1, in2, out0, out1 });
con.DAQController = dc;
// DAQController-to-streams
Assert.IsTrue(dc.InputStreams.Contains(in0));
Assert.IsTrue(dc.InputStreams.Contains(in1));
Assert.IsTrue(dc.InputStreams.Contains(in2));
Assert.IsTrue(dc.OutputStreams.Contains(out0));
Assert.IsTrue(dc.OutputStreams.Contains(out0));
// Validate and report the validation results
Maybe<string> conVal = con.Validate();
Assert.IsTrue(conVal, conVal.Item2);
Assert.IsTrue(amp.Coalesce == CoalescingDevice.OneItemCoalesce);
}
public void PullOutputDataShouldReturnNullWithNullCurrentEpoch()
{
Controller c = new Controller();
IExternalDevice dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, c, UNUSED_BACKGROUND);
IList<IMeasurement> data = (IList<IMeasurement>) Enumerable.Range(0, 1000).Select(i => new Measurement(i, "V") as IMeasurement).ToList();
var sampleRate = new Measurement(1000, "Hz");
IOutputData data1 = new OutputData(data, sampleRate, false);
var e = new Epoch("");
e.Stimuli[dev] = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) new Dictionary<string, object>(),
data1);
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), sampleRate);
Assert.Null(c.PullOutputData(dev, TimeSpan.FromSeconds(1)));
}
public void NexEpochShouldDequeueEpoch()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List<IMeasurement> { new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V") };
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string) "ID1",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
Assert.That(c.CurrentEpoch, Is.Null);
c.NextEpoch();
Assert.That(c.CurrentEpoch, Is.EqualTo(e));
}
public void RunEpochThrowsGivenEpochWithInconsistentStimulusDurations()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev1", "co", c, new Measurement(0, "V"));
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev1] = new RenderedStimulus((string) "ID1",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) new OutputData(new List<IMeasurement> { new Measurement(1, "V") },
sampleRate, true));
e.Stimuli[dev2] = new RenderedStimulus((string) "ID2",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) new OutputData(new List<IMeasurement> { new Measurement(1, "V"), new Measurement(1, "V") },
sampleRate, true));
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf<ArgumentException>());
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "V",
new Dictionary<string, object>(),
(x, y) => null,
(p) => Option<TimeSpan>.None());
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf<ArgumentException>());
}
private static Epoch CreateTestEpoch(out ExternalDeviceBase dev1, out ExternalDeviceBase dev2)
{
dev1 = new UnitConvertingExternalDevice("dev1", "man1", new Measurement(0, "V"));
dev2 = new UnitConvertingExternalDevice("dev2", "man2", new Measurement(0, "V"));
var stream1 = new DAQInputStream("Stream1");
var stream2 = new DAQInputStream("Stream2");
var stimParameters = new Dictionary<string, object>();
stimParameters["param1"] = 1;
stimParameters["param2"] = 2;
var srate = new Measurement(1000, "Hz");
List<Measurement> samples =
Enumerable.Range(0, 10000).Select(i => new Measurement((decimal)Math.Sin((double)i / 100), "V")).ToList();
var stimData = new OutputData(samples, srate, false);
var stim1 = new RenderedStimulus("RenderedStimulus", stimParameters, stimData);
var stim2 = new RenderedStimulus("RenderedStimulus", stimParameters, stimData)
{
ShouldDataBePersisted = true
};
var protocolParameters = new Dictionary<string, object>
{
{"one", 1},
{"two", "second"},
{"three", 5.55}
};
var epoch = new TestEpoch("protocol.banana", protocolParameters);
epoch.Stimuli[dev1] = stim1;
epoch.Stimuli[dev2] = stim2;
DateTimeOffset start = DateTimeOffset.Now;
epoch.SetStartTime(Maybe<DateTimeOffset>.Yes(start));
epoch.Backgrounds[dev1] = new Background(new Measurement(0, "V"), new Measurement(1000, "Hz"));
epoch.Backgrounds[dev2] = new Background(new Measurement(1, "V"), new Measurement(1000, "Hz"));
epoch.Responses[dev1] = new Response();
epoch.Responses[dev2] = new Response();
var streamConfig = new Dictionary<string, object>();
streamConfig["configParam1"] = 1;
var devConfig = new Dictionary<string, object>();
devConfig["configParam2"] = 2;
IInputData responseData1 = new InputData(samples, srate, start)
.DataWithStreamConfiguration(stream1, streamConfig)
.DataWithExternalDeviceConfiguration(dev1, devConfig);
IInputData responseData2 = new InputData(samples, srate, start + TimeSpanExtensions.FromSamples((uint) samples.Count, srate))
.DataWithStreamConfiguration(stream1, streamConfig)
.DataWithExternalDeviceConfiguration(dev1, devConfig);
IInputData responseData3 = new InputData(samples, srate, start)
.DataWithStreamConfiguration(stream2, streamConfig)
.DataWithExternalDeviceConfiguration(dev2, devConfig);
IInputData responseData4 = new InputData(samples, srate, start + TimeSpanExtensions.FromSamples((uint)samples.Count, srate))
.DataWithStreamConfiguration(stream2, streamConfig)
.DataWithExternalDeviceConfiguration(dev2, devConfig);
epoch.Responses[dev1].AppendData(responseData1);
epoch.Responses[dev1].AppendData(responseData2);
epoch.Responses[dev2].AppendData(responseData3);
epoch.Responses[dev2].AppendData(responseData4);
epoch.Properties.Add("prop1", 5);
epoch.Properties.Add("prop2", "banana");
epoch.Keywords.Add("word1");
epoch.Keywords.Add("word2");
return epoch;
}
public void RunEpochThrowsGivenIndefiniteEpochWithResponses()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev2] = new DelegatedStimulus("ID2", "units",
new Dictionary<string, object>(),
(x, y) => null,
(p) => Option<TimeSpan>.None());
e.Responses[dev2] = new Response();
Assert.That(() => c.RunEpoch(e, new FakeEpochPersistor()), Throws.Exception.TypeOf<ArgumentException>());
}
public void GetDeivceReturnsDevice()
{
Controller c = new Controller();
const string DEVICE_NAME = "DEVICE";
var dev1 = new UnitConvertingExternalDevice(DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND);
c.AddDevice(dev1);
Assert.AreEqual(dev1, c.GetDevice(DEVICE_NAME));
}
public void ShouldNotPersistEpochGivenNullPersistor()
{
var c = new Controller();
bool evt = false;
c.DAQController = new TestDAQController();
c.Clock = c.DAQController as IClock;
c.DiscardedEpoch += (co, args) => Assert.Fail("Run failed");
var dev = new UnitConvertingExternalDevice(UNUSED_DEVICE_NAME, UNUSED_DEVICE_MANUFACTURER, UNUSED_BACKGROUND)
{
Controller = c,
MeasurementConversionTarget = "V"
};
var outStream = new DAQOutputStream("outStream") { MeasurementConversionTarget = "V" };
var inStream = new DAQInputStream("inStream") { MeasurementConversionTarget = "V" };
(c.DAQController as IMutableDAQController).AddStream(outStream);
(c.DAQController as IMutableDAQController).AddStream(inStream);
var srate = new Measurement(10, "Hz");
outStream.SampleRate = srate;
inStream.SampleRate = srate;
dev.BindStream(outStream);
dev.BindStream(inStream);
var e = new Epoch(UNUSED_PROTOCOL);
var samples = new List<IMeasurement> { new Measurement(1.0m, "V"), new Measurement(1.0m, "V"), new Measurement(1.0m, "V") };
var data = new OutputData(samples,
srate,
true);
e.Stimuli[dev] = new RenderedStimulus((string) "stimID",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev] = new Response();
e.Background[dev] = new Epoch.EpochBackground(new Measurement(0, "V"), srate);
((TestDAQController)c.DAQController).AddStreamMapping(outStream, inStream);
c.RunEpoch(e, null);
Assert.Pass();
}
public void ShouldRaiseExceptionIfPullingLessThanOneSample()
{
var e = new UnitConvertingExternalDevice(UNUSED_NAME, null, new Measurement(0, "V"));
var stream = new DAQOutputStream(UNUSED_NAME);
e.BindStream(stream);
stream.SampleRate = new Measurement(1, "Hz");
Assert.Throws<ExternalDeviceException>(() => e.PullOutputData(stream, TimeSpan.FromMilliseconds(0.1)));
}
public void ShouldSupplyEpochBackgroundForExternalDevicesWithoutStimuli()
{
var c = new Controller();
var dev1 = new UnitConvertingExternalDevice("dev1", "co", c, new Measurement(0, "V"));
var dev2 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
int baseSamples = 1000;
IList<IMeasurement> data = (IList<IMeasurement>)Enumerable.Range(0, baseSamples)
.Select(i => new Measurement(i, "V") as IMeasurement)
.ToList();
Measurement sampleRate = new Measurement(baseSamples, "Hz");
var config = new Dictionary<string, object>();
IOutputData data1 = new OutputData(data, sampleRate, true);
var e = new Epoch("");
e.Stimuli[dev1] = new RenderedStimulus((string) "RenderedStimulus", (IDictionary<string, object>) config, data1);
var backgroundMeasurement = new Measurement(3.2m, "V");
e.Background[dev2] = new Epoch.EpochBackground(backgroundMeasurement, sampleRate);
c.EnqueueEpoch(e);
c.NextEpoch();
var out1 = c.PullOutputData(dev1, e.Duration);
Assert.NotNull(out1);
var out2 = c.PullOutputData(dev2, e.Duration);
Assert.NotNull(out2);
Assert.AreEqual((TimeSpan)e.Duration, out2.Duration);
Assert.AreEqual(backgroundMeasurement, out2.Data.First());
}
public void RunEpochShouldDiscardEpochWhenCancelEpochCalled()
{
Converters.Register("V", "V",
// just an identity conversion for now, to pass Validate()
(IMeasurement m) => m);
var c = new Controller { DAQController = new SimpleDAQController2() };
c.DAQController.Clock = c.DAQController as IClock;
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev1", "co", c, new Measurement(0, "V"))
{
MeasurementConversionTarget = "V",
Clock = c.Clock
};
var sampleRate = new Measurement(1, "Hz");
e.Stimuli[dev1] = new DelegatedStimulus("ID1", "units", new Dictionary<string, object>(),
(parameters, duration) =>
new OutputData(new List<IMeasurement>(), sampleRate, false),
objects => Option<TimeSpan>.None());
bool epochDiscarded = false;
c.DiscardedEpoch += (sender, args) =>
{
epochDiscarded = true;
};
c.DAQController.ProcessIteration += (o, eventArgs) =>
{
Console.WriteLine("Process iteration");
c.CancelEpoch();
};
c.RunEpoch(e, new FakeEpochPersistor());
Assert.True(epochDiscarded);
}
public void NextEpochThrowsIfCannotDequeue()
{
var c = new Controller();
var e = new Epoch(UNUSED_PROTOCOL);
var dev1 = new UnitConvertingExternalDevice("dev2", "co", c, new Measurement(0, "V"));
var sampleRate = new Measurement(1, "Hz");
var samples = new List<IMeasurement> { new Measurement(1, "V"), new Measurement(2, "V"), new Measurement(3, "V") };
var data = new OutputData(samples,
sampleRate, true);
e.Stimuli[dev1] = new RenderedStimulus((string) "ID1",
(IDictionary<string, object>) new Dictionary<string, object>(),
(IOutputData) data);
e.Responses[dev1] = new Response();
c.EnqueueEpoch(e);
c.NextEpoch();
Assert.Throws<SymphonyControllerException>(() => c.NextEpoch());
}