public void ReadFields(BinaryReader input)
{
var probsLength = input.ReadInt32();
_probs = new double[probsLength];
for (int i = 0; i < probsLength; i++)
{
_probs[i] = input.ReadDouble();
}
_backpointers = new List <int[]>();
int backpointersSize = input.ReadInt32();
int stateNumber = input.ReadInt32();
for (int i = 0; i < backpointersSize; ++i)
{
int[] optimalStates = new int[stateNumber];
for (int j = 0; j < optimalStates.Length; ++j)
{
optimalStates[j] = input.ReadInt32();
}
_backpointers.Add(optimalStates);
}
Position = input.ReadInt32();
LastLikelihood = input.ReadDouble();
int mapSize = input.ReadInt32();
var nodeMap = new BiDictionary <HmmOnlineNode, int>(); // HashBiMap.create(mapSize);
for (int i = 0; i < mapSize; ++i)
{
HmmOnlineNode.Read(nodeMap, input);
}
Tree = new HmmOnlineTree();
int treeSize = input.ReadInt32();
for (int i = 0; i < treeSize; ++i)
{
Tree.AddLast(HmmOnlineNode.Read(nodeMap, input));
}
Root = HmmOnlineNode.Read(nodeMap, input);
_leaves = new HmmOnlineNode[stateNumber];
for (int i = 0; i < _leaves.Length; ++i)
{
_leaves[i] = HmmOnlineNode.Read(nodeMap, input);
}
}
private void Clear()
{
_probs = null;
Tree = new HmmOnlineTree();
_leaves = new HmmOnlineNode[HmmData.HiddenStatesCount];
Root = null;
for (int i = 0; i < HmmData.HiddenStatesCount; ++i)
{
var node = new HmmOnlineNode();
node.Position = 0;
node.State = i;
Tree.AddLast(node);
_leaves[i] = node;
}
_backpointers = new List <int[]>();
Position = 0;
LastLikelihood = Double.MinValue;
}
