/// <summary>
/// prepare to perform the analysis
/// </summary>
public void PrepAnalysisInteractive()
{
CheckREnvironment();
// clear out the library
_subsLib.FilteredLibrary.ClearResults();
// read the custom functions from the dir
_rfunc = new RFunctions(_functionsDir, _statConn);
_rfunc.Reload();
// get the size of this run so we can update interested parties
_analysisSize = _subsLib.FilteredLibrary.NumEntries * _hsAssayResults.Count;
_analysisCount = 0;
_enum = _hsAssayResults.GetEnumerator();
// Enumerators start out _before_ the beginning of the collection, so we have to
// MoveNext to be at the first value
_enum.MoveNext();
_currResults = ((AssayResults)_enum.Value).FilteredResults;
// associate the stats collection with the results
_currResults.StatCollection = _stats.Copy();
// clear subresults
_currResults.ClearSubResults();
// associate the results with the substructure library
_subsLib.FilteredLibrary.AddResults(_currResults);
// prep the statistics run
_currResults.PrepInteractiveStatisticsRun(_statConn);
}
/// <summary>
/// Run the analysis in a piecewise fashion, so progress can be reported and
/// analysis stopped if necessary. Returns the percentage of analysis done.
/// </summary>
public int RunAnalysisInteractive()
{
int percentDone = -1;
bool b = _currResults.CalculateStatisticsInteractive(_statConn);
// if return value was false, then the statistics are done for this assay result,
// and we should try to move to the next
if (!b)
{
if (_enum.MoveNext())
{
_currResults = ((AssayResults)_enum.Value).FilteredResults;
// associate the stats collection with the results
_currResults.StatCollection = _stats.Copy();
// associate the results with the substructure library
_subsLib.FilteredLibrary.AddResults(_currResults);
// prep the statistics run
_currResults.PrepInteractiveStatisticsRun(_statConn);
b = _currResults.CalculateStatisticsInteractive(_statConn);
}
}
// if we have a true return value from CalculateStatisticsInteractive, then we can increment the count
if (b)
{
_analysisCount++;
percentDone = Convert.ToInt32((double)_analysisCount / (double)_analysisSize * 100);
}
return(percentDone);
}
