public OmimTsvCreator(string geneMap2Path, string mim2GenePath, GeneSymbolUpdater geneSymbolUpdater,
string outputDirectory)
{
_geneMap2Path = geneMap2Path;
_mim2GenePath = mim2GenePath;
_geneSymbolUpdater = geneSymbolUpdater;
_outputDirectory = outputDirectory;
}
private static ExitCodes ProgramExecution()
{
var(ensemblGeneIdToSymbol, entrezGeneIdToSymbol) = ParseUniversalGeneArchive();
var geneSymbolUpdater = new GeneSymbolUpdater(ensemblGeneIdToSymbol, entrezGeneIdToSymbol);
var omimTsvCreator = new OmimTsvCreator(_inputGeneMap2Path, _mim2GenePath, geneSymbolUpdater, _outputTsvDirectory);
return(omimTsvCreator.Create());
}
