/// <summary>
/// Load From File
/// </summary>
/// <param name="file">Config File</param>
/// <returns>DSS Config model <see cref="DSSConfig"/> </returns>
public static DSSConfig FromString(string file)
{
DSSConfig ret = null;
try
{
ret = JsonConvert.DeserializeObject <DSSConfig>(file);
}
catch (Exception ex)
{
throw ex;
}
return(ret);
}
/// <summary>
/// Evaluate
/// </summary>
/// <param name="model">Dexi Model</param>
/// <param name="config">DSS configuration model</param>
/// <param name="values">Dictionary values</param>
/// <returns>List of DSS Values <see cref="DSSValue"/> </returns>
private IEnumerable <DSSValue> Evaluate(Model model, DSSConfig config, Dictionary <string, string> values)
{
foreach (var parameterInfo in config.Input)
{
var key = parameterInfo.Name;
try
{
if (values.ContainsKey(key) && !string.IsNullOrEmpty(values[key]))
{
if (parameterInfo.Numeric)
{
double v = double.Parse(values[key]);
model.SetInputValue(parameterInfo.Name, parameterInfo.GetNumericMapping(v));
}
else
{
int?v = parameterInfo.GetCategoryMapping(values[key]);
if (v.HasValue)
{
model.SetInputValue(parameterInfo.Name, v.Value);
}
else
{
model.SetInputValue(parameterInfo.Name, parameterInfo.DefaultValue);
}
}
}
else
{
model.SetInputValue(parameterInfo.Name, parameterInfo.DefaultValue);
}
}
catch (Exception ex)
{
Debug.WriteLine($"Error setting param {parameterInfo.Name} with ex {ex.Message}");
}
}
model.Evaluate(Model.Evaluation.SET, true);
var ret = model.Aggregate.Select(e => new DSSValue()
{
Name = e.Name, Code = e.Name, Value = e.ValuesString
});
return(ret);
}
/// <summary>
/// Run DSS
/// </summary>
/// <param name="patientId">Patient Id</param>
/// <param name="configJson">DSS Config as Json String file</param>
/// <returns>List of DSS Values <see cref="DSSValue"/> </returns>
public async Task <IEnumerable <DSSValue> > Run(string patientId, string configJson)
{
try
{
Dictionary <string, int> valueMapping = new Dictionary <string, int>();
var config = DSSConfig.FromString(configJson);
//TODO: Handle Exceptions
var model = LoadModel(config.DexiFile);
// Set initial values
foreach (var c in config.Input)
{
model.SetInputValue(c.Name, c.DefaultValue);
}
//Get DSS input values
var values = await GetInputValues(patientId, configJson);
//Assing new values
Dictionary <string, string> dict = new Dictionary <string, string>();
foreach (var c in values)
{
if (!dict.ContainsKey(c.Name))
{
dict.Add(c.Name, c.Value);
}
}
return(Evaluate(model, config, dict));
}
catch (Exception ex)
{
//TODO: Log
throw;
}
}
/// <summary>
///
/// </summary>
/// <param name="patientId">Patient Id</param>
/// <param name="config">DSS Configuration file</param>
/// <returns>List of DSS Values <see cref="DSSValue"/> </returns>
private async Task <IEnumerable <DSSValue> > GetInputValues(string patientId, DSSConfig config)
{
List <DSSValue> values = new List <DSSValue>();
//Codes from observations
List <string> observationCodes = new List <string>();
//Codes from Meta o
List <string> metaObservationCodes = new List <string>();
//Codes from Patient Clinical Info
List <string> clinicalInfoCodes = new List <string>();
//Codes from Patient Clinical Info
List <string> demographicCodes = new List <string>();
foreach (var c in config.Input)
{
if (string.IsNullOrEmpty(c.Source))
{
//TODO: Add some error to response
continue;
}
if (c.Source.ToLower() == ObservationType)
{
if (!observationCodes.Contains(c.Code))
{
observationCodes.Add(c.Code);
}
}
else if (c.Source.ToLower() == MetaObservationType)
{
if (!metaObservationCodes.Contains(c.Code))
{
metaObservationCodes.Add(c.Code);
}
}
else if (c.Source.ToLower() == ClinicalInfoType)
{
if (!clinicalInfoCodes.Contains(c.Code))
{
clinicalInfoCodes.Add(c.Code);
}
}
else if (c.Source.ToLower() == DemographicsType)
{
if (!demographicCodes.Contains(c.Code))
{
demographicCodes.Add(c.Code);
}
}
else
{
throw new NotSupportedException($"Source type {c.Source} not supported from PDManager DSS");
}
}
#region Observation Codes
//TODO: Join observations codes in a single request in case
foreach (var code in observationCodes)
{
try
{
var observations = await _dataProxy.Get <PDObservation>(10, 0, String.Format("{{patientid:\"{0}\",datefrom:\"{2}\",dateto:\"{3}\",codeid:\"{1}\",aggr:\"total\"}}", patientId, code, (DateTime.Now.AddDays(-config.AggregationPeriodDays).ToUnixTimestampMilli()), (DateTime.Now.ToUnixTimestampMilli())), null);
foreach (var observation in config.Input.Where(e => e.Code == code))
{
values.Add(new DSSValue()
{
Name = observation.Name, Code = observation.Code, Value = observations.Select(e => e.Value).DefaultIfEmpty(0).Average().ToString()
});
}
// }
}
catch (Exception ex)
{
Debug.WriteLine(ex);
}
}
#endregion Meta Observation Codes
#region Meta Observation Codes
foreach (var code in metaObservationCodes)
{
try
{
//Get Aggregated observation
var aggrObservation = await _aggregator.Run(patientId, code, DateTime.Now.AddDays(-config.AggregationPeriodDays));
//Find Corresponding observation in config
foreach (var metaObservation in config.Input.Where(e => e.Code == code))
{
//Meta Observations are only numeric
values.Add(new DSSValue()
{
Name = metaObservation.Name, Code = metaObservation.Code, Value = aggrObservation.Select(e => e.Value).DefaultIfEmpty(0).Average().ToString()
});
}
}
catch (Exception ex)
{
throw ex;
}
}
#endregion Observation Codes
#region Clinical Info
try
{
var patient = await _dataProxy.Get <PDPatient>(patientId);
var clinicalInfoList = GetClinicalInfoList(patient.ClinicalInfo);
foreach (var c in clinicalInfoList)
{
var clinicalInfo = config.Input.FirstOrDefault(e => e.Code.ToLower() == c.Code.ToLower());
if (clinicalInfo != null)
{
values.Add(new DSSValue()
{
Name = clinicalInfo.Name, Code = clinicalInfo.Code, Value = c.Value
});
}
}
}
catch (Exception ex)
{
throw ex;
}
#endregion Clinical Info
#region Demographics Info
try
{
var patient = await _dataProxy.Get <PDPatient>(patientId);
var demographicInfoList = GetDemographicsInfoList(patient);
foreach (var c in demographicInfoList)
{
var clinicalInfo = config.Input.FirstOrDefault(e => e.Code.ToLower() == c.Code.ToLower());
if (clinicalInfo != null)
{
values.Add(new DSSValue()
{
Name = clinicalInfo.Name, Code = clinicalInfo.Code, Value = c.Value
});
}
}
}
catch (Exception ex)
{
throw ex;
}
#endregion Clinical Info
return(values);
}