private static void registerCoreComponents(IContainer container) { container.AddRegister(x => x.FromType <CoreRegister>()); container.AddRegister(x => x.FromType <Core.CoreRegister>()); container.AddRegister(x => x.FromType <InfrastructureRegister>()); container.Register <IDimensionParser, DimensionParser>(); }
private static void registerReporters(IContainer container) { container.AddRegister(x => x.FromType <ReportingRegister>()); container.AddRegister(x => x.FromType <OSPSuite.Infrastructure.Reporting.ReportingRegister>()); container.AddScanner(scan => { scan.AssemblyContainingType <CoreRegister>(); scan.IncludeNamespaceContainingType <ProjectReporter>(); scan.WithConvention <ReporterRegistrationConvention>(); }); }
private static void registerSerializationDependencies(IContainer container) { //create serializer repository for xml persisentence and register all available serializer var register = new SerializerRegister(); container.AddRegister(x => x.FromInstance(register)); register.PerformMappingForSerializerIn(container); }
private static void registerImport(IContainer container) { var mobiDataImprterSettings = new DataImporterSettings { Icon = ApplicationIcons.MoBi, Caption = "MoBi Data Import" }; container.RegisterImplementationOf(mobiDataImprterSettings); container.AddRegister(x => x.FromType <SBMLImportRegister>()); }
public static void RegisterSerializationDependencies(IContainer container) { container.Register <ISerializationManager, XmlSerializationManager>(); container.Register <IStringSerializer, StringSerializer>(); container.Register <IStringSerializer, CompressedStringSerializer>(CoreConstants.Serialization.Compressed); container.Register <IPKSimXmlSerializerRepository, PKSimXmlSerializerRepository>(LifeStyle.Singleton); container.Register(typeof(IXmlReader <>), typeof(XmlReader <>)); container.Register(typeof(IXmlWriter <>), typeof(XmlWriter <>)); //Core serialization to serialize to pkml compatible with core container.AddRegister(x => x.FromType <CoreSerializerRegister>()); }
public override void RegisterInContainer(IContainer container) { container.AddRegister(x => x.FromInstance(new OSPSuite.Core.CoreRegister { RegisterParameter = false })); //Register PKSim.Core container.AddScanner(scan => { scan.AssemblyContainingType <CoreRegister>(); //Exclude type that should be register as singleton because of caching scan.ExcludeType <FormulationValuesRetriever>(); scan.ExcludeType <ObjectTypeResolver>(); scan.ExcludeType <PKSimDimensionFactory>(); scan.ExcludeType <PKSimObjectBaseFactory>(); scan.ExcludeType <DistributionFormulaFactory>(); scan.ExcludeType <ApplicationSettings>(); scan.ExcludeType <ProjectChangedNotifier>(); scan.ExcludeType <IndividualSimulationEngine>(); scan.ExcludeType <DefaultIndividualRetriever>(); scan.ExcludeType <IPopulationSimulationEngine>(); //Do not register the InteractiveSimulationRunner as it should be registered only if needed scan.ExcludeType <InteractiveSimulationRunner>(); scan.ExcludeType <SnapshotMapper>(); scan.ExcludeNamespaceContainingType <IndividualDiffBuilder>(); scan.WithConvention <PKSimRegistrationConvention>(); }); //Register singletons explicitly container.AddScanner(scan => { scan.AssemblyContainingType <CoreRegister>(); scan.IncludeType <FormulationValuesRetriever>(); scan.IncludeType <ObjectTypeResolver>(); scan.IncludeType <DistributionFormulaFactory>(); scan.IncludeType <ProjectChangedNotifier>(); scan.IncludeType <SnapshotMapper>(); scan.IncludeType <DefaultIndividualRetriever>(); scan.RegisterAs(LifeStyle.Singleton); scan.WithConvention <PKSimRegistrationConvention>(); }); container.Register <ICoreSimulationFactory, SimulationFactory>(); container.Register <ISetParameterTask, ParameterTask>(LifeStyle.Transient); container.Register <ITransferOptimizedParametersToSimulationsTask, TransferOptimizedParametersToSimulationsTask <IExecutionContext> >(); container.Register <IIndividualSimulationEngine, ISimulationEngine <IndividualSimulation, SimulationRunResults>, IndividualSimulationEngine>(LifeStyle.Transient); container.Register <IPopulationSimulationEngine, ISimulationEngine <PopulationSimulation, PopulationRunResults>, PopulationSimulationEngine>(LifeStyle.Transient); //other singleton external to application container.Register <ICloneManager, Cloner>(LifeStyle.Singleton); //Register special type for parameters so that core methods in the context of pksim creates a PKSimParameter container.Register <IParameter, PKSimParameter>(); container.Register <IDistributedParameter, PKSimDistributedParameter>(); //specific PKSim Implementations container.Register <IPathToPathElementsMapper, PKSimPathToPathElementsMapper>(); container.Register <IDataColumnToPathElementsMapper, PKSimDataColumnToPathElementsMapper>(); container.Register <IQuantityPathToQuantityDisplayPathMapper, PKSimQuantityPathToQuantityDisplayPathMapper>(); //Register Factories container.RegisterFactory <ISimulationEngineFactory>(); container.RegisterFactory <IChartDataToTableMapperFactory>(); container.Register <IPKSimObjectBaseFactory, IObjectBaseFactory, PKSimObjectBaseFactory>(LifeStyle.Singleton); container.Register <IPKSimDimensionFactory, IDimensionFactory, PKSimDimensionFactory>(LifeStyle.Singleton); container.Register <IApplicationSettings, OSPSuite.Core.IApplicationSettings, ApplicationSettings>(LifeStyle.Singleton); //Register opened types generics container.Register <IInterpolation, LinearInterpolation>(); container.Register <IPivoter, Pivoter>(); container.Register <ISimulationSubject, Individual>(); container.Register <Protocol, SimpleProtocol>(); container.Register <Simulation, IndividualSimulation>(); container.Register <Population, RandomPopulation>(); container.Register <SchemaItem, SchemaItem>(); //generic command registration container.Register <IOSPSuiteExecutionContext, ExecutionContext>(); registerMoleculeFactories(container); registerComparers(container); }
public override void RegisterInContainer(IContainer container) { container.AddScanner(scan => { scan.AssemblyContainingType <InfrastructureRegister>(); //ORM Repository should be registered as singleton scan.ExcludeNamespaceContainingType <SpeciesRepository>(); //this type will be registered using another convention scan.ExcludeNamespaceContainingType <IObjectConverter>(); //Converter scan.ExcludeNamespaceContainingType <IReportBuilder>(); //report builder scan.ExcludeNamespaceContainingType <SimulationReporter>(); //tex reporter scan.ExcludeNamespaceContainingType <IndividualTeXBuilder>(); //tex builder scan.ExcludeNamespaceContainingType <PKSimXmlSerializerRepository>(); //Serializer scan.ExcludeType <CommandMetaDataRepository>(); scan.ExcludeType <DefaultIndividualRetriever>(); scan.ExcludeType <SessionManager>(); scan.ExcludeType <TemplateDatabase>(); scan.ExcludeType <ProteinExpressionDatabase>(); scan.ExcludeType <ProteinExpressionQueries>(); scan.ExcludeType <ModelDatabase>(); scan.ExcludeType <VersionChecker>(); scan.ExcludeType <Workspace>(); //already registered scan.ExcludeType <PKSimXmlSerializerRepository>(); scan.ExcludeType <PKSimConfiguration>(); scan.ExcludeType <SerializationContext>(); scan.WithConvention <PKSimRegistrationConvention>(); }); container.AddScanner(scan => { scan.AssemblyContainingType <InfrastructureRegister>(); scan.IncludeNamespaceContainingType <SpeciesRepository>(); //Repository scan.IncludeType <CommandMetaDataRepository>(); scan.IncludeType <DefaultIndividualRetriever>(); scan.IncludeType <SessionManager>(); scan.IncludeType <TemplateDatabase>(); scan.IncludeType <ProteinExpressionDatabase>(); scan.IncludeType <ProteinExpressionQueries>(); scan.IncludeType <ModelDatabase>(); scan.IncludeType <VersionChecker>(); scan.RegisterAs(LifeStyle.Singleton); scan.WithConvention <OSPSuiteRegistrationConvention>(); }); container.Register <IWorkspace, Workspace>(LifeStyle.Singleton); registerConverters(container); registerReportBuilders(container); registerTexReporters(container); container.Register <ICompression, SharpLibCompression>(); container.Register <IStringCompression, StringCompression>(); container.Register <IProjectRetriever, PKSimProjectRetriever>(); container.Register <IObservedDataConfiguration, ImportObservedDataTask>(); container.Register <IFlatContainerIdToContainerMapperSpecification, FlatContainerIdToFormulationMapper>(); container.Register <IFileLocker, FileLocker>(LifeStyle.Singleton); registerORMDependencies(); var xmlRegister = new CoreSerializerRegister(); container.AddRegister(x => x.FromInstance(xmlRegister)); var sbsuiteSerializerRepository = container.Resolve <IOSPSuiteXmlSerializerRepository>(); sbsuiteSerializerRepository.AddPresentationSerializers(); xmlRegister.PerformMappingForSerializerIn(container); container.AddRegister(x => x.FromType <ReportingRegister>()); container.AddRegister(x => x.FromType <OSPSuite.TeXReporting.ReportingRegister>()); container.AddRegister(x => x.FromType <OSPSuite.Infrastructure.InfrastructureRegister>()); //register factory also as IObjectBaseFactoryIBuildTrackerFactory var factory = container.Resolve <IPKSimObjectBaseFactory>() as IObjectBaseFactory; container.RegisterImplementationOf(factory); var configuration = container.Resolve <IPKSimConfiguration>(); var versionChecker = container.Resolve <IVersionChecker>(); versionChecker.VersionFileUrl = CoreConstants.VERSION_FILE_URL; versionChecker.CurrentVersion = configuration.Version; versionChecker.ProductName = CoreConstants.PRODUCT_NAME; }
private static void registerView(IContainer container) { container.AddRegister(x => x.FromType <UserInterfaceRegister>()); }
private static void registerPresenter(IContainer container) { container.AddRegister(x => x.FromType <PresentationRegister>()); }
private static void registerUIComponents(IContainer container) { container.AddRegister(x => x.FromType <DiagramRegister>()); }
private void registerSerializers(IContainer container) { container.AddRegister(x => x.FromType <OSPSuite.Infrastructure.Serialization.InfrastructureSerializationRegister>()); }
private void registerImporter(IContainer container) { container.AddRegister(x => x.FromType <InfrastructureImportRegister>()); }
public override void GlobalContext() { base.GlobalContext(); var windsorContainer = new CastleWindsorContainer(); IContainer container = windsorContainer; windsorContainer.WindsorContainer.AddFacility <TypedFactoryFacility>(); IoC.InitializeWith(container); IoC.RegisterImplementationOf(container); //need to register these services for which the default implementation is in the UI using (container.OptimizeDependencyResolution()) { container.RegisterImplementationOf(new SynchronizationContext()); container.Register <IExceptionManager, ExceptionManagerForSpecs>(LifeStyle.Singleton); container.RegisterImplementationOf(A.Fake <IUserSettings>()); container.RegisterImplementationOf(A.Fake <IDialogCreator>()); container.RegisterImplementationOf(A.Fake <IProgressUpdater>()); container.RegisterImplementationOf(A.Fake <IMoBiHistoryManager>()); container.RegisterImplementationOf(A.Fake <IXmlContentSelector>()); container.RegisterImplementationOf(A.Fake <IDiagramModel>()); container.RegisterImplementationOf(A.Fake <IDiagramTask>()); container.RegisterImplementationOf(A.Fake <IMRUProvider>()); container.RegisterImplementationOf(A.Fake <IFileLocker>()); container.RegisterImplementationOf(A.Fake <IDisplayUnitRetriever>()); container.RegisterImplementationOf(A.Fake <IJournalDiagramManagerFactory>()); container.RegisterImplementationOf(A.Fake <ISimulationDiagramManager>()); container.RegisterImplementationOf(A.Fake <ISpatialStructureDiagramManager>()); container.RegisterImplementationOf(A.Fake <IMoBiReactionDiagramManager>()); container.RegisterImplementationOf(A.Fake <ISimulationDiagramView>()); container.RegisterImplementationOf(A.Fake <IContainerBaseLayouter>()); container.RegisterImplementationOf(A.Fake <ILayerLayouter>()); container.Register <IDiagramModelToXmlMapper, BatchDiagramModelToXmlMapper>(); container.Register <IMoBiConfiguration, MoBiConfiguration>(LifeStyle.Singleton); container.Register <IEventPublisher, EventPublisher>(LifeStyle.Singleton); IHeavyWorkManager heavyWorkManager = new HeavyWorkManagerForSpecs(); container.RegisterImplementationOf(heavyWorkManager); container.RegisterImplementationOf(A.Fake <IProgressManager>()); var config = container.Resolve <IMoBiConfiguration>(); container.RegisterImplementationOf((IApplicationConfiguration)config); var register = new SerializerRegister(); container.AddRegister(x => { x.FromType <CoreRegister>(); x.FromType <Core.CoreRegister>(); x.FromInstance(new PresentationRegister(false)); x.FromType <SBMLImportRegister>(); x.FromType <InfrastructureRegister>(); x.FromInstance(register); }); register.PerformMappingForSerializerIn(container); container.RegisterImplementationOf(A.Fake <IMoBiMainViewPresenter>()); setupDimensions(container); setupCalculationMethods(container); var context = container.Resolve <IMoBiContext>(); container.RegisterImplementationOf <IWorkspace>(context); } //Required for usage with nunit 3 Environment.CurrentDirectory = AppDomain.CurrentDomain.BaseDirectory; }
public override void RegisterInContainer(IContainer container) { container.AddScanner(scan => { scan.AssemblyContainingType <InfrastructureRegister>(); //ORM Repository should be registered as singleton scan.ExcludeNamespaceContainingType <SpeciesRepository>(); //this type will be registered using another convention scan.ExcludeNamespaceContainingType <IObjectConverter>(); //Converter scan.ExcludeNamespaceContainingType <IReportBuilder>(); //report builder scan.ExcludeNamespaceContainingType <IMarkdownBuilder>(); //Markdown builder scan.ExcludeNamespaceContainingType <SimulationReporter>(); //tex reporter scan.ExcludeNamespaceContainingType <IndividualTeXBuilder>(); //tex builder scan.ExcludeNamespaceContainingType <PKSimXmlSerializerRepository>(); //Serializer scan.ExcludeType <CommandMetaDataRepository>(); scan.ExcludeType <DefaultIndividualRetriever>(); scan.ExcludeType <SessionManager>(); scan.ExcludeType <TemplateDatabase>(); scan.ExcludeType <GeneExpressionDatabase>(); scan.ExcludeType <GeneExpressionQueries>(); scan.ExcludeType <ModelDatabase>(); scan.ExcludeType <VersionChecker>(); scan.ExcludeType <Workspace>(); scan.ExcludeType <PKSimLogger>(); scan.ExcludeType <StringSerializer>(); scan.ExcludeType <CompressedStringSerializer>(); //already registered scan.ExcludeType <PKSimXmlSerializerRepository>(); scan.ExcludeType <PKSimConfiguration>(); scan.ExcludeType <SerializationContext>(); scan.WithConvention <PKSimRegistrationConvention>(); }); container.AddScanner(scan => { scan.AssemblyContainingType <InfrastructureRegister>(); scan.IncludeNamespaceContainingType <SpeciesRepository>(); //Repository scan.IncludeType <CommandMetaDataRepository>(); scan.IncludeType <DefaultIndividualRetriever>(); scan.IncludeType <SessionManager>(); scan.IncludeType <TemplateDatabase>(); scan.IncludeType <GeneExpressionDatabase>(); scan.IncludeType <GeneExpressionQueries>(); scan.IncludeType <ModelDatabase>(); scan.IncludeType <VersionChecker>(); scan.RegisterAs(LifeStyle.Singleton); scan.WithConvention <OSPSuiteRegistrationConvention>(); }); registerConverters(container); registerReportBuilders(container); registerTexReporters(container); registerMarkdownBuilders(container); container.Register <IProjectRetriever, PKSimProjectRetriever>(); container.Register <IObservedDataConfiguration, ImportObservedDataTask>(); container.Register <IFlatContainerIdToContainerMapperSpecification, FlatContainerIdToFormulationMapper>(); container.Register <IFileLocker, FileLocker>(LifeStyle.Singleton); registerORMDependencies(container); container.AddRegister(x => x.FromType <ReportingRegister>()); container.AddRegister(x => x.FromType <InfrastructureSerializationRegister>()); container.AddRegister(x => x.FromType <InfrastructureReportingRegister>()); container.AddRegister(x => x.FromType <InfrastructureExportRegister>()); container.AddRegister(x => x.FromType <InfrastructureImportRegister>()); var configuration = container.Resolve <IPKSimConfiguration>(); var versionChecker = container.Resolve <IVersionChecker>(); versionChecker.VersionFileUrl = CoreConstants.VERSION_FILE_URL; versionChecker.CurrentVersion = configuration.Version; versionChecker.ProductName = CoreConstants.PRODUCT_NAME; }
public override void RegisterInContainer(IContainer container) { container.AddRegister(x => x.FromInstance(new OSPSuite.Core.CoreRegister { RegisterParameter = false })); //Register PKSim.Core container.AddScanner(scan => { scan.AssemblyContainingType <CoreRegister>(); //Exclude type that should be register as singleton because of caching scan.ExcludeType <FormulationValuesRetriever>(); scan.ExcludeType <ObjectTypeResolver>(); scan.ExcludeType <PKSimDimensionFactory>(); scan.ExcludeType <PKSimObjectBaseFactory>(); scan.ExcludeType <DistributionFormulaFactory>(); scan.ExcludeType <ApplicationSettings>(); scan.ExcludeType <ProjectChangedNotifier>(); scan.ExcludeType <BatchLogger>(); scan.ExcludeType <SimulationRunner>(); scan.ExcludeNamespaceContainingType <IndividualDiffBuilder>(); scan.WithConvention <PKSimRegistrationConvention>(); }); //Register singletons explicitely container.AddScanner(scan => { scan.AssemblyContainingType <CoreRegister>(); scan.IncludeType <FormulationValuesRetriever>(); scan.IncludeType <ObjectTypeResolver>(); scan.IncludeType <PKSimObjectBaseFactory>(); scan.IncludeType <DistributionFormulaFactory>(); scan.IncludeType <ApplicationSettings>(); scan.IncludeType <ProjectChangedNotifier>(); scan.IncludeType <BatchLogger>(); scan.IncludeType <SimulationRunner>(); scan.RegisterAs(LifeStyle.Singleton); scan.WithConvention <PKSimRegistrationConvention>(); }); container.Register <ICoreSimulationFactory, SimulationFactory>(); container.Register <ISetParameterTask, ParameterTask>(); container.Register <ITransferOptimizedParametersToSimulationsTask, TransferOptimizedParametersToSimulationsTask <IExecutionContext> >(); //other singleton external to application container.Register <ICloneManager, Cloner>(LifeStyle.Singleton); //Register special type for parameters so that core methods in the context of pksim creates a PKSimParameter container.Register <IParameter, PKSimParameter>(); container.Register <IDistributedParameter, PKSimDistributedParameter>(); //Register Factories container.RegisterFactory <ISimulationEngineFactory>(); container.RegisterFactory <IChartDataToTableMapperFactory>(); container.Register <IPKSimDimensionFactory, IDimensionFactory, PKSimDimensionFactory>(LifeStyle.Singleton); //Register opened types generics container.Register(typeof(IRepository <>), typeof(ImplementationRepository <>)); container.Register <IInterpolation, LinearInterpolation>(); container.Register <IPivoter, Pivoter>(); container.Register <ISimulationSubject, Individual>(); container.Register <Protocol, SimpleProtocol>(); container.Register <Simulation, IndividualSimulation>(); container.Register <Population, RandomPopulation>(); //generic command registration container.Register <IOSPSuiteExecutionContext, ExecutionContext>(); registerMoleculeFactories(container); registerComparers(container); }