public override void Run() { if (LAI != null) { System.Console.WriteLine("Updating output variable: LAI"); // Total LAI per site ISiteVar <byte> values = cohorts.GetIsiteVar(o => o.CanopyLAImax); string FileName = FileNames.ReplaceTemplateVars(LAI.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <byte, byte>(FileName, values, o => o); // Values per species each time step LAI.output_table_ecoregions.WriteUpdate(PlugIn.ModelCore.CurrentTime, values); } if (Biomass != null) { System.Console.WriteLine("Updating output variable: Biomass"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > Biom = cohorts.GetIsiteVar(o => o.BiomassPerSpecies); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar <int> Biom_spc = modelCore.Landscape.NewSiteVar <int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { Biom_spc[site] = Biom[site][spc]; } new OutputMapSpecies(Biom_spc, spc, Biomass.MapNameTemplate); } OutputFilePerTStepPerSpecies.Write <int>(Biomass.MapNameTemplate, Biomass.units, PlugIn.ModelCore.CurrentTime, Biom); ISiteVar <float> Biomass_site = cohorts.GetIsiteVar(x => x.BiomassSum); Biomass.output_table_ecoregions.WriteUpdate <float>(PlugIn.ModelCore.CurrentTime, Biomass_site); } if (AbovegroundBiomass != null) { System.Console.WriteLine("Updating output variable: Aboveground Biomass"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > AGBiom = cohorts.GetIsiteVar(o => o.AbovegroundBiomassPerSpecies); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar <int> AGBiom_spc = modelCore.Landscape.NewSiteVar <int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { AGBiom_spc[site] = AGBiom[site][spc]; } new OutputMapSpecies(AGBiom_spc, spc, AbovegroundBiomass.MapNameTemplate); } OutputFilePerTStepPerSpecies.Write <int>(AbovegroundBiomass.MapNameTemplate, AbovegroundBiomass.units, PlugIn.ModelCore.CurrentTime, AGBiom); ISiteVar <float> AGBiomass_site = cohorts.GetIsiteVar(x => x.AbovegroundBiomassSum); AbovegroundBiomass.output_table_ecoregions.WriteUpdate <float>(PlugIn.ModelCore.CurrentTime, AGBiomass_site); } if (WoodySenescence != null) { System.Console.WriteLine("Updating output variable: Woody Senescence"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > Senes = cohorts.GetIsiteVar(o => o.WoodySenescencePerSpecies); /* * foreach (ISpecies spc in PlugIn.SelectedSpecies) * { * ISiteVar<int> Senes_spc = modelCore.Landscape.NewSiteVar<int>(); * * foreach (ActiveSite site in PlugIn.modelCore.Landscape) * { * Senes_spc[site] = Senes[site][spc]; * * } * * new OutputMapSpecies(Senes_spc, spc, WoodySenescence.MapNameTemplate); * } */ OutputFilePerTStepPerSpecies.Write <int>(WoodySenescence.MapNameTemplate, WoodySenescence.units, PlugIn.ModelCore.CurrentTime, Senes); ISiteVar <float> Senescence_site = cohorts.GetIsiteVar(x => x.WoodySenescenceSum); WoodySenescence.output_table_ecoregions.WriteUpdate <float>(PlugIn.ModelCore.CurrentTime, Senescence_site); } if (FoliageSenescence != null) { System.Console.WriteLine("Updating output variable: Foliage Senescence"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > Senes = cohorts.GetIsiteVar(o => o.FoliageSenescencePerSpecies); /*foreach (ISpecies spc in PlugIn.SelectedSpecies) * { * ISiteVar<int> Senes_spc = modelCore.Landscape.NewSiteVar<int>(); * * foreach (ActiveSite site in PlugIn.modelCore.Landscape) * { * Senes_spc[site] = Senes[site][spc]; * } * * new OutputMapSpecies(Senes_spc, spc, FoliageSenescence.MapNameTemplate); * } */ OutputFilePerTStepPerSpecies.Write <int>(FoliageSenescence.MapNameTemplate, FoliageSenescence.units, PlugIn.ModelCore.CurrentTime, Senes); ISiteVar <float> Senescence_site = cohorts.GetIsiteVar(x => x.FoliageSenescenceSum); FoliageSenescence.output_table_ecoregions.WriteUpdate <float>(PlugIn.ModelCore.CurrentTime, Senescence_site); } if (AETAvg != null) { ISiteVar <float> AET_site = cohorts.GetIsiteVar(x => x.AETSum); AETAvg.output_table_ecoregions.WriteUpdate <float>(PlugIn.ModelCore.CurrentTime, AET_site); } if (MonthlyFolResp != null) { ISiteVar <int[]> monthlyFolResp = cohorts.GetIsiteVar(site => site.FolResp); WriteMonthlyOutput(monthlyFolResp, MonthlyFolResp.MapNameTemplate); } if (MonthlyGrossPsn != null) { ISiteVar <int[]> monthlyGrossPsn = cohorts.GetIsiteVar(site => site.GrossPsn); WriteMonthlyOutput(monthlyGrossPsn, MonthlyGrossPsn.MapNameTemplate); } if (MonthlyNetPsn != null) { ISiteVar <int[]> monthlyNetPsn = cohorts.GetIsiteVar(site => site.NetPsn); WriteMonthlyOutput(monthlyNetPsn, MonthlyNetPsn.MapNameTemplate); } if (MonthlyMaintResp != null) { ISiteVar <int[]> monthlyMaintResp = cohorts.GetIsiteVar(site => site.MaintResp); WriteMonthlyOutput(monthlyMaintResp, MonthlyMaintResp.MapNameTemplate); } if (BelowGround != null) { System.Console.WriteLine("Updating output variable: BelowGround"); ISiteVar <uint> values = cohorts.GetIsiteVar(o => o.BelowGroundBiomass); string FileName = FileNames.ReplaceTemplateVars(BelowGround.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <uint, uint>(FileName, values, o => o); } if (CohortsPerSpc != null) { System.Console.WriteLine("Updating output variable: CohortsPerSpc"); // Nr of Cohorts per site and per species ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > cps = cohorts.GetIsiteVar(x => x.CohortCountPerSpecies); new OutputHistogramCohort <int>(CohortsPerSpc.MapNameTemplate, "CohortsPerSpcPerSite", 10).WriteOutputHist(cps); foreach (ISpecies spc in PlugIn.SelectedSpecies) { string FileName = FileNames.ReplaceTemplateVars(CohortsPerSpc.MapNameTemplate, spc.Name, PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <Landis.Library.Parameters.Species.AuxParm <int>, int>(FileName, cps, o => o[spc]); } OutputFilePerTStepPerSpecies.Write <int>(CohortsPerSpc.MapNameTemplate, CohortsPerSpc.units, PlugIn.ModelCore.CurrentTime, cps); } if (EstablishmentProbability != null) { System.Console.WriteLine("Updating output variable: EstablishmentProbability"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <byte> > pest = (ISiteVar <Landis.Library.Parameters.Species.AuxParm <byte> >)cohorts.GetIsiteVar(o => o.EstablishmentProbability.Probability); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar <int> _pest = modelCore.Landscape.NewSiteVar <int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { _pest[site] = pest[site][spc]; } new OutputMapSpecies(_pest, spc, EstablishmentProbability.MapNameTemplate); } } if (SpeciesEstablishment != null) { System.Console.WriteLine("Updating output variable: SpeciesEstablishment"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <bool> > SpeciesIsThere = cohorts.GetIsiteVar(o => o.SpeciesPresent); if (SpeciesWasThere != null) { foreach (ISpecies spc in PlugIn.modelCore.Species) { ISiteVar <int> comp = PlugIn.modelCore.Landscape.NewSiteVar <int>(); MapComparison m = new MapComparison(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { if (SpeciesWasThere[site] == null) { SpeciesWasThere[site] = new Library.Parameters.Species.AuxParm <bool>(PlugIn.modelCore.Species); } comp[site] = m[SpeciesWasThere[site][spc], SpeciesIsThere[site][spc]]; SpeciesWasThere[site][spc] = SpeciesIsThere[site][spc]; } OutputMapSpecies output_map = new OutputMapSpecies(comp, spc, SpeciesEstablishment.MapNameTemplate); // map label text m.PrintLabels(SpeciesEstablishment.MapNameTemplate, spc); } } else { SpeciesWasThere = modelCore.Landscape.NewSiteVar <Landis.Library.Parameters.Species.AuxParm <bool> >(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { SpeciesWasThere[site] = new Library.Parameters.Species.AuxParm <bool>(PlugIn.modelCore.Species); } } ISiteVar <Landis.Library.Parameters.Species.AuxParm <bool> > Established_spc = cohorts.GetIsiteVar(x => x.SpeciesPresent); Landis.Library.Parameters.Species.AuxParm <int> Est_Sum = new Landis.Library.Parameters.Species.AuxParm <int>(PlugIn.modelCore.Species); foreach (ActiveSite site in PlugIn.ModelCore.Landscape) { foreach (ISpecies spc in PlugIn.modelCore.Species) { if (Established_spc[site][spc] == true) { Est_Sum[spc]++; } } } OutputFilePerTStepPerSpecies.Write <int>(SpeciesEstablishment.MapNameTemplate, SpeciesEstablishment.units, PlugIn.ModelCore.CurrentTime, Est_Sum); } if (AnnualPsn != null) { System.Console.WriteLine("Updating output variable: AnnualPsn"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <int> > Biom = cohorts.GetIsiteVar(o => o.BiomassPerSpecies); if (LastBiom != null) { foreach (ISpecies spc in PlugIn.modelCore.Species) { ISiteVar <int> comp = PlugIn.modelCore.Landscape.NewSiteVar <int>(); MapComparison m = new MapComparison(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { if (LastBiom[site] == null) { LastBiom[site] = new Library.Parameters.Species.AuxParm <int>(PlugIn.modelCore.Species); } comp[site] = Biom[site][spc] - LastBiom[site][spc]; LastBiom[site][spc] = Biom[site][spc]; } OutputMapSpecies output_map = new OutputMapSpecies(comp, spc, AnnualPsn.MapNameTemplate); } } else { LastBiom = modelCore.Landscape.NewSiteVar <Landis.Library.Parameters.Species.AuxParm <int> >(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { LastBiom[site] = new Library.Parameters.Species.AuxParm <int>(PlugIn.modelCore.Species); } } } if (Water != null) { System.Console.WriteLine("Updating output variable: Water"); ISiteVar <ushort> Water_site = cohorts.GetIsiteVar(x => x.WaterMax); string FileName = FileNames.ReplaceTemplateVars(Water.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <ushort, ushort>(FileName, Water_site, o => o); Water.output_table_ecoregions.WriteUpdate(PlugIn.ModelCore.CurrentTime, Water_site); } if (SubCanopyPAR != null) { System.Console.WriteLine("Updating output variable: SubCanopyPAR"); ISiteVar <float> SubCanopyRadiation = cohorts.GetIsiteVar(x => x.SubCanopyParMAX); string FileName = FileNames.ReplaceTemplateVars(SubCanopyPAR.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <float, float>(FileName, SubCanopyRadiation, o => o); } if (NonWoodyDebris != null) { System.Console.WriteLine("Updating output variable: NonWoodyDebris"); ISiteVar <double> Litter = cohorts.GetIsiteVar(x => x.Litter); string FileName = FileNames.ReplaceTemplateVars(NonWoodyDebris.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <double, double>(FileName, Litter, o => o); } if (WoodyDebris != null) { System.Console.WriteLine("Updating output variable: WoodyDebris"); ISiteVar <double> woody_debris = cohorts.GetIsiteVar(x => x.WoodyDebris); string FileName = FileNames.ReplaceTemplateVars(WoodyDebris.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <double, double>(FileName, woody_debris, o => o); } if (AgeDistribution != null) { System.Console.WriteLine("Updating output variable: AgeDistribution"); ISiteVar <Landis.Library.Parameters.Species.AuxParm <List <ushort> > > values = cohorts.GetIsiteVar(o => o.CohortAges); new OutputHistogramCohort <ushort>(AgeDistribution.MapNameTemplate, "NrOfCohortsAtAge", 10).WriteOutputHist(values); System.Console.WriteLine("Updating output variable: MaxAges"); ISiteVar <int> maxage = cohorts.GetIsiteVar(x => x.AgeMax); string FileName = FileNames.ReplaceTemplateVars(AgeDistribution.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar <int, int>(FileName, maxage, o => o); } if (overalloutputs != null) { System.Console.WriteLine("Updating output variable: overalloutputs"); OutputAggregatedTable.WriteNrOfCohortsBalance(); } }
public override void Run() { System.Console.WriteLine("Updating output variable: BelowGround"); if (LAI != null) { System.Console.WriteLine("Updating output variable: LAI"); // Total LAI per site ISiteVar<byte> values = cohorts.GetIsiteVar(o => o.CanopyLAImax); string FileName = FileNames.ReplaceTemplateVars(LAI.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<byte, byte>(FileName, values, o => o); // Values per species each time step LAI.output_table_ecoregions.WriteUpdate(PlugIn.ModelCore.CurrentTime, values); } if (Biomass != null) { System.Console.WriteLine("Updating output variable: Biomass"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> Biom = cohorts.GetIsiteVar(o => o.BiomassPerSpecies); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar<int> Biom_spc = modelCore.Landscape.NewSiteVar<int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { Biom_spc[site] = Biom[site][spc]; } new OutputMapSpecies(Biom_spc, spc, Biomass.MapNameTemplate); } OutputFilePerTStepPerSpecies.Write<int>(Biomass.MapNameTemplate, Biomass.units, PlugIn.ModelCore.CurrentTime, Biom); ISiteVar<float> Biomass_site = cohorts.GetIsiteVar(x => x.BiomassSum); Biomass.output_table_ecoregions.WriteUpdate<float>(PlugIn.ModelCore.CurrentTime, Biomass_site); } if (AbovegroundBiomass != null) { System.Console.WriteLine("Updating output variable: Aboveground Biomass"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> AGBiom = cohorts.GetIsiteVar(o => o.AbovegroundBiomassPerSpecies); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar<int> AGBiom_spc = modelCore.Landscape.NewSiteVar<int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { AGBiom_spc[site] = AGBiom[site][spc]; } new OutputMapSpecies(AGBiom_spc, spc, AbovegroundBiomass.MapNameTemplate); } OutputFilePerTStepPerSpecies.Write<int>(AbovegroundBiomass.MapNameTemplate, Biomass.units, PlugIn.ModelCore.CurrentTime, AGBiom); ISiteVar<float> AGBiomass_site = cohorts.GetIsiteVar(x => x.AbovegroundBiomassSum); AbovegroundBiomass.output_table_ecoregions.WriteUpdate<float>(PlugIn.ModelCore.CurrentTime, AGBiomass_site); } if (WoodySenescence != null) { System.Console.WriteLine("Updating output variable: Woody Senescence"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> Senes = cohorts.GetIsiteVar(o => o.WoodySenescencePerSpecies); /* foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar<int> Senes_spc = modelCore.Landscape.NewSiteVar<int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { Senes_spc[site] = Senes[site][spc]; } new OutputMapSpecies(Senes_spc, spc, WoodySenescence.MapNameTemplate); } */ OutputFilePerTStepPerSpecies.Write<int>(WoodySenescence.MapNameTemplate, WoodySenescence.units, PlugIn.ModelCore.CurrentTime, Senes); ISiteVar<float> Senescence_site = cohorts.GetIsiteVar(x => x.WoodySenescenceSum); WoodySenescence.output_table_ecoregions.WriteUpdate<float>(PlugIn.ModelCore.CurrentTime, Senescence_site); } if (FoliageSenescence != null) { System.Console.WriteLine("Updating output variable: Foliage Senescence"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> Senes = cohorts.GetIsiteVar(o => o.FoliageSenescencePerSpecies); /*foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar<int> Senes_spc = modelCore.Landscape.NewSiteVar<int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { Senes_spc[site] = Senes[site][spc]; } new OutputMapSpecies(Senes_spc, spc, FoliageSenescence.MapNameTemplate); } */ OutputFilePerTStepPerSpecies.Write<int>(FoliageSenescence.MapNameTemplate, FoliageSenescence.units, PlugIn.ModelCore.CurrentTime, Senes); ISiteVar<float> Senescence_site = cohorts.GetIsiteVar(x => x.FoliageSenescenceSum); FoliageSenescence.output_table_ecoregions.WriteUpdate<float>(PlugIn.ModelCore.CurrentTime, Senescence_site); } if (MonthlyFolResp != null) { ISiteVar<int[]> monthlyFolResp = cohorts.GetIsiteVar(site => site.FolResp); WriteMonthlyOutput(monthlyFolResp, MonthlyFolResp.MapNameTemplate); } if (MonthlyGrossPsn != null) { ISiteVar<int[]> monthlyGrossPsn = cohorts.GetIsiteVar(site => site.GrossPsn); WriteMonthlyOutput(monthlyGrossPsn, MonthlyGrossPsn.MapNameTemplate); } if (MonthlyNetPsn != null) { ISiteVar<int[]> monthlyNetPsn = cohorts.GetIsiteVar(site => site.NetPsn); WriteMonthlyOutput(monthlyNetPsn, MonthlyNetPsn.MapNameTemplate); } if (MonthlyMaintResp != null) { ISiteVar<int[]> monthlyMaintResp = cohorts.GetIsiteVar(site => site.MaintResp); WriteMonthlyOutput(monthlyMaintResp, MonthlyMaintResp.MapNameTemplate); } if (BelowGround != null) { System.Console.WriteLine("Updating output variable: BelowGround"); ISiteVar<uint> values = cohorts.GetIsiteVar(o => o.BelowGroundBiomass); string FileName = FileNames.ReplaceTemplateVars(BelowGround.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<uint, uint>(FileName, values, o => o); } if (CohortsPerSpc != null) { System.Console.WriteLine("Updating output variable: CohortsPerSpc"); // Nr of Cohorts per site and per species ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> cps = cohorts.GetIsiteVar(x => x.CohortCountPerSpecies); new OutputHistogramCohort<int>(CohortsPerSpc.MapNameTemplate, "CohortsPerSpcPerSite", 10).WriteOutputHist(cps); foreach (ISpecies spc in PlugIn.modelCore.Species) { string FileName = FileNames.ReplaceTemplateVars(CohortsPerSpc.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<Landis.Library.Parameters.Species.AuxParm<int>, int>(FileName, cps, o => o[spc]); } OutputFilePerTStepPerSpecies.Write<int>(CohortsPerSpc.MapNameTemplate, CohortsPerSpc.units, PlugIn.ModelCore.CurrentTime, cps); } if (EstablishmentProbability != null) { System.Console.WriteLine("Updating output variable: EstablishmentProbability"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<byte>> pest = cohorts.GetIsiteVar(o => o.EstablishmentProbability.Probability); foreach (ISpecies spc in PlugIn.SelectedSpecies) { ISiteVar<int> _pest = modelCore.Landscape.NewSiteVar<int>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { _pest[site] = pest[site][spc]; } new OutputMapSpecies(_pest, spc, EstablishmentProbability.MapNameTemplate); } } if (SpeciesEstablishment != null) { System.Console.WriteLine("Updating output variable: SpeciesEstablishment"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<bool>> SpeciesIsThere = cohorts.GetIsiteVar(o => o.SpeciesPresent); if (SpeciesWasThere != null) { foreach (ISpecies spc in PlugIn.modelCore.Species) { ISiteVar<int> comp = PlugIn.modelCore.Landscape.NewSiteVar<int>(); MapComparison m = new MapComparison(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { if (SpeciesWasThere[site] == null) { SpeciesWasThere[site] = new Library.Parameters.Species.AuxParm<bool>(PlugIn.modelCore.Species); } comp[site] = m[SpeciesWasThere[site][spc], SpeciesIsThere[site][spc]]; SpeciesWasThere[site][spc] = SpeciesIsThere[site][spc]; } OutputMapSpecies output_map = new OutputMapSpecies(comp, spc, SpeciesEstablishment.MapNameTemplate); // map label text m.PrintLabels(SpeciesEstablishment.MapNameTemplate, spc); } } else { SpeciesWasThere = modelCore.Landscape.NewSiteVar<Landis.Library.Parameters.Species.AuxParm<bool>>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { SpeciesWasThere[site] = new Library.Parameters.Species.AuxParm<bool>(PlugIn.modelCore.Species); } } ISiteVar<Landis.Library.Parameters.Species.AuxParm<bool>> Established_spc = cohorts.GetIsiteVar(x => x.SpeciesPresent); Landis.Library.Parameters.Species.AuxParm<int> Est_Sum = new Landis.Library.Parameters.Species.AuxParm<int>(PlugIn.modelCore.Species); foreach (ActiveSite site in PlugIn.ModelCore.Landscape) { foreach(ISpecies spc in PlugIn.modelCore.Species) { if(Established_spc[site][spc] ==true) { Est_Sum[spc]++; } } } OutputFilePerTStepPerSpecies.Write<int>(SpeciesEstablishment.MapNameTemplate, SpeciesEstablishment.units, PlugIn.ModelCore.CurrentTime, Est_Sum); } if (AnnualPsn != null) { System.Console.WriteLine("Updating output variable: AnnualPsn"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<int>> Biom = cohorts.GetIsiteVar(o => o.BiomassPerSpecies); if (LastBiom != null) { foreach (ISpecies spc in PlugIn.modelCore.Species) { ISiteVar<int> comp = PlugIn.modelCore.Landscape.NewSiteVar<int>(); MapComparison m = new MapComparison(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { if (LastBiom[site] == null) { LastBiom[site] = new Library.Parameters.Species.AuxParm<int>(PlugIn.modelCore.Species); } comp[site] = Biom[site][spc] - LastBiom[site][spc]; LastBiom[site][spc] = Biom[site][spc]; } OutputMapSpecies output_map = new OutputMapSpecies(comp, spc, AnnualPsn.MapNameTemplate); } } else { LastBiom = modelCore.Landscape.NewSiteVar<Landis.Library.Parameters.Species.AuxParm<int>>(); foreach (ActiveSite site in PlugIn.modelCore.Landscape) { LastBiom[site] = new Library.Parameters.Species.AuxParm<int>(PlugIn.modelCore.Species); } } } if (Water != null) { System.Console.WriteLine("Updating output variable: Water"); ISiteVar<ushort> Water_site = cohorts.GetIsiteVar(x => x.WaterMax); string FileName = FileNames.ReplaceTemplateVars(Water.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<ushort, ushort>(FileName, Water_site, o => o); Water.output_table_ecoregions.WriteUpdate(PlugIn.ModelCore.CurrentTime, Water_site); } if (SubCanopyPAR != null) { System.Console.WriteLine("Updating output variable: SubCanopyPAR"); ISiteVar<float> SubCanopyRadiation = cohorts.GetIsiteVar(x => x.SubCanopyParMAX); string FileName = FileNames.ReplaceTemplateVars(SubCanopyPAR.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<float, float>(FileName, SubCanopyRadiation, o => o); } if (NonWoodyDebris != null) { System.Console.WriteLine("Updating output variable: NonWoodyDebris"); ISiteVar<double> Litter = cohorts.GetIsiteVar(x => x.Litter); string FileName = FileNames.ReplaceTemplateVars(NonWoodyDebris.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<double, double>(FileName, Litter, o => o); } if (WoodyDebris != null) { System.Console.WriteLine("Updating output variable: WoodyDebris"); ISiteVar<double> woody_debris = cohorts.GetIsiteVar(x => x.WoodyDebris); string FileName = FileNames.ReplaceTemplateVars(WoodyDebris.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<double, double>(FileName, woody_debris, o => o); } if (AgeDistribution != null) { System.Console.WriteLine("Updating output variable: AgeDistribution"); ISiteVar<Landis.Library.Parameters.Species.AuxParm<List<ushort>>> values = cohorts.GetIsiteVar(o => o.CohortAges); new OutputHistogramCohort<ushort>(AgeDistribution.MapNameTemplate, "NrOfCohortsAtAge", 10).WriteOutputHist(values); System.Console.WriteLine("Updating output variable: MaxAges"); ISiteVar<int> maxage = cohorts.GetIsiteVar(x => x.AgeMax); string FileName = FileNames.ReplaceTemplateVars(AgeDistribution.MapNameTemplate, "", PlugIn.ModelCore.CurrentTime); new OutputMapSiteVar<int, int>(FileName, maxage, o => o); } if (overalloutputs != null) { System.Console.WriteLine("Updating output variable: overalloutputs"); OutputAggregatedTable.WriteNrOfCohortsBalance(); } }