private void ToolStripMenuItem_SaveAsHTML(object sender, EventArgs e) { cTableToHTML THTML = new cTableToHTML(); THTML.SetInputData(this.Input); THTML.IsDisplayUIForFilePath = true; THTML.ListProperties.FindByName("Open HTML File ?").SetNewValue((bool)true); THTML.ListProperties.FindByName("Open HTML File ?").IsGUIforValue = true; // THTML.IsDisplayResult = true; THTML.Run(); }
void ToolStripMenuItem_DRCAnalysisMultiDesc_Click(object sender, EventArgs e) { List<cDescriptorType> ListSelectedDescs = cGlobalInfo.CurrentScreening.ListDescriptors.GetActiveDescriptors(); cListListWells CurrentSelectedGroups = this.BuildListListWells(); #region select folder var dlg1 = new Ionic.Utils.FolderBrowserDialogEx(); dlg1.Description = "Select the folder containing your databases."; dlg1.ShowNewFolderButton = true; dlg1.ShowEditBox = true; dlg1.ShowFullPathInEditBox = true; DialogResult result = dlg1.ShowDialog(); if (result != DialogResult.OK) return; string Path = dlg1.SelectedPath; if (Directory.Exists(Path) == false) return; string FolderName = dlg1.SelectedPath; #endregion foreach (var item in ListSelectedDescs) { string TmpFolder = FolderName + "\\" + item.GetName(); Directory.CreateDirectory(TmpFolder); int IdxNode = 0; List<cDescriptorType> ListSelectedDesc = new List<cDescriptorType>(); ListSelectedDesc.Add(item); cExtendedTable TableForGeneralResuts = new cExtendedTable(); TableForGeneralResuts.Add(new cExtendedList("p-Value")); TableForGeneralResuts.Add(new cExtendedList("EC50")); TableForGeneralResuts.Add(new cExtendedList("Slope")); TableForGeneralResuts.Add(new cExtendedList("Bottom")); TableForGeneralResuts.Add(new cExtendedList("Top")); TableForGeneralResuts.Add(new cExtendedList("Window")); TableForGeneralResuts.Add(new cExtendedList("Area Under Curve")); TableForGeneralResuts.ListRowNames = new List<string>(); TableForGeneralResuts.ListTags = new List<object>(); foreach (cListWells TmpListWells in CurrentSelectedGroups) { // List<cDescriptorType> LType = new List<cDescriptorType>(); // LType.Add(ListSelectedDesc[i]); cExtendedTable CompleteTable = TmpListWells.GetAverageDescriptorValues(ListSelectedDesc, true, false); //cExtendedTable CompleteTable = GLP.GetOutPut(); cCurveForGraph CFG = new cCurveForGraph(); CFG.SetInputData(CompleteTable); CFG.Run(); cSigmoidFitting SF = new cSigmoidFitting(); SF.SetInputData(CompleteTable); if (SF.Run().IsSucceed == false) continue; // double Ratio = LR.GetOutPut()[0][LR.GetOutPut().Count - 1] / SF.GetOutPut()[0][SF.GetOutPut().Count - 1]; cANOVA A = new cANOVA(); cExtendedTable NewTable = CFG.ListPtValues.Crop(0, CFG.ListPtValues.Count - 1, 1, CFG.ListPtValues[0].Count - 1); A.SignificanceThreshold = 1E-11; A.SetInputData(NewTable); A.Run(); cExtendedTable Sigmoid = SF.GetFittedRawValues(CFG.GetListXValues()); CompleteTable[0] = Sigmoid[1]; CompleteTable[0].Name = ListSelectedDesc[0].GetName() + "\n" + Sigmoid[1].Name; cDesignerSplitter DS = new cDesignerSplitter(); //cViewerTableAsRichText VT = new cViewerTableAsRichText(); cViewerTable VT = new cViewerTable(); cExtendedTable TableResults = SF.GetOutPut(); if ((A.GetOutPut() != null) && (A.GetOutPut().Count > 0)) { TableResults[0].Add(A.GetOutPut()[0][0]); TableResults[0].Add(A.GetOutPut()[0][1]); TableResults.ListRowNames.Add("p-Value"); TableResults.ListRowNames.Add("Rejected?"); TableForGeneralResuts[0].Add(A.GetOutPut()[0][0]); } else { TableForGeneralResuts[0].Add(1); } TableResults.Name = TV.Nodes[IdxNode].Text; TableResults[0].Name = "Fitting Parameters"; VT.SetInputData(TableResults); VT.DigitNumber = -1; VT.Run(); cViewerGraph1D VS1 = new cViewerGraph1D(); cExtendedTable MyTable = new cExtendedTable(Sigmoid[1]); MyTable.Name = TmpListWells.Name;// TV.Nodes[IdxNode].Text; VS1.SetInputData(MyTable); VS1.AddCurve(CFG); VS1.Chart.X_AxisValues = Sigmoid[0]; VS1.Chart.IsLogAxis = true; VS1.Chart.IsLine = true; VS1.Chart.IsShadow = false; VS1.Chart.Opacity = 210; VS1.Chart.LineWidth = 3; VS1.Chart.MarkerSize = 8; VS1.Chart.IsDisplayValues = cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxDRCDisplayValues.Checked; VS1.Chart.LabelAxisX = "Concentration"; VS1.Chart.LabelAxisY = CompleteTable[1].Name; VS1.Chart.XAxisFormatDigitNumber = cGlobalInfo.OptionsWindow.FFAllOptions.GetDRCNumberOfDigit(); VS1.Chart.IsZoomableX = true; Classes.Base_Classes.General.cLineVerticalForGraph VLForEC50 = new Classes.Base_Classes.General.cLineVerticalForGraph(SF.GetOutPut()[0][2]); //VLForEC50.AddText("EC50: " + SF.GetOutPut()[0][2].ToString("e3")/* + "\nError Ratio:" + Ratio.ToString("N4")*/); VS1.Chart.ListVerticalLines.Add(VLForEC50); TableForGeneralResuts.ListRowNames.Add(TV.Nodes[IdxNode].Text); TableForGeneralResuts.ListTags.Add((Chart)VS1.Chart);//ListSelectedDesc[0]); //EC50 TableForGeneralResuts[1].Add(SF.GetOutPut()[0][2]); // Slope TableForGeneralResuts[2].Add(SF.GetOutPut()[0][3]); // Bottom TableForGeneralResuts[3].Add(SF.GetOutPut()[0][0]); // Top TableForGeneralResuts[4].Add(SF.GetOutPut()[0][1]); // Window double Window = SF.GetOutPut()[0][1] / SF.GetOutPut()[0][0]; TableForGeneralResuts[5].Add(Window); TableForGeneralResuts[6].Add(SF.GetOutPut()[0][5]); VS1.Chart.ArraySeriesInfo = new cSerieInfoDesign[CompleteTable.Count]; for (int IdxCurve = 0; IdxCurve < CompleteTable.Count; IdxCurve++) { cSerieInfoDesign TmpSerieInfo = new cSerieInfoDesign(); TmpSerieInfo.color = cGlobalInfo.ListCellularPhenotypes[IdxCurve % cGlobalInfo.ListCellularPhenotypes.Count].ColourForDisplay; TmpSerieInfo.markerStyle = MarkerStyle.None; VS1.Chart.ArraySeriesInfo[IdxCurve] = TmpSerieInfo; } VS1.Run(); //DS.SetInputData(VS1.GetOutPut()); //DS.SetInputData(VT.GetOutPut()); //DS.Orientation = Orientation.Horizontal; //DS.Title = TV.Nodes[IdxNode++].Text; //TmpListWells.ti;// ListSelectedDesc[0].GetName(); //DS.Run(); IdxNode++; // DT.SetInputData(DS.GetOutPut()); } cTableToHTML THTML = new cTableToHTML(); TableForGeneralResuts.Name = item.GetName(); THTML.SetInputData(TableForGeneralResuts); THTML.IsDisplayUIForFilePath = false; THTML.FolderName = TmpFolder; THTML.ListProperties.FindByName("Open HTML File ?").SetNewValue((bool)false); THTML.ListProperties.FindByName("Open HTML File ?").IsGUIforValue = false; THTML.Run(); } System.Diagnostics.Process.Start(FolderName); }
public void ExportToHTML(cDescriptorType Desc) { if (Desc.IsConnectedToDatabase == false) return; List<cDescriptorType> LCDT = new List<cDescriptorType>(); LCDT.Add(Desc); List<cCellularPhenotype> ListCellularPhenotypesToBeSelected = new List<cCellularPhenotype>(); cGUI_ListClasses GUIClasses = new cGUI_ListClasses(); GUIClasses.IsCheckBoxes = true; GUIClasses.IsSelectAll = true; GUIClasses.ClassType = eClassType.PHENOTYPE; if (!GUIClasses.Run().IsSucceed) return; int IDx = 0; foreach (var item in cGlobalInfo.ListCellularPhenotypes) { if ((GUIClasses.GetOutPut()[0][IDx++] != 0)) ListCellularPhenotypesToBeSelected.Add(item); } cExtendedTable ET = new cExtendedTable(cGlobalInfo.CurrentScreening.Columns, cGlobalInfo.CurrentScreening.Rows, 0); ET.Name = this.Name + " [" + Desc.GetName() + "]"; ET.ListRowNames = new List<string>(); for (int i = 0; i < ET[0].Count; i++) { ET.ListRowNames.Add(((char)(i + 65)).ToString()); } FormForProgress MyProgressBar = new FormForProgress(); MyProgressBar.progressBar.Maximum = this.ListActiveWells.Count; MyProgressBar.Show(); //ET.ListTags = new List<object>(); for (int i = 0; i < cGlobalInfo.CurrentScreening.Columns; i++) { ET[i].ListTags = new List<object>(); ET[i].Name = (i + 1).ToString(); for (int j = 0; j < cGlobalInfo.CurrentScreening.Rows; j++) { MyProgressBar.progressBar.Update(); cWell TmpWell = this.GetWell(i, j, true); if (TmpWell == null) { ET[i].ListTags.Add("n.a."); continue; } MyProgressBar.progressBar.Value++; cExtendedTable TmpET = null; if (cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxHTMLExportStackedHisto.Checked) TmpET = TmpWell.GetValuesList(LCDT, ListCellularPhenotypesToBeSelected, true); else TmpET = TmpWell.GetValuesList(LCDT, ListCellularPhenotypesToBeSelected, false); TmpET.Name = "[" + TmpWell.GetPos() + "] - " + TmpET[0].Count + " Objects"; // get the values associated to this well and descriptor if (cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxHTMLExportStackedHisto.Checked) { cExtendedTable FinalTable = new cExtendedTable(); FinalTable.Name = "Stacked Histogram - " + this.GetName(); int Idx = 0; foreach (var item in cGlobalInfo.ListCellularPhenotypes) { FinalTable.Add(new cExtendedList()); FinalTable[Idx].Name = item.Name; FinalTable[Idx].Tag = item; for (int k = 0; k < TmpET[1].Count; k++) { if (TmpET[1][k] == Idx) FinalTable[Idx].Add(TmpET[0][k]); } Idx++; } cViewerStackedHistogram VSH = new cViewerStackedHistogram(); VSH.SetInputData(FinalTable);//TmpET); VSH.Chart.LabelAxisX = Desc.GetName(); VSH.Chart.IsLine = false; VSH.Chart.CurrentTitle.Text = TmpET.Name; if ((cGlobalInfo.OptionsWindow.radioButtonHistoDisplayManualMinMax.Checked) || (cGlobalInfo.OptionsWindow.radioButtonHistoDisplayAutomatedMinMax.Checked)) { VSH.Chart.DefaultAxisXMin = new cExtendedList(); VSH.Chart.DefaultAxisXMin.Add((double)cGlobalInfo.OptionsWindow.numericUpDownManualMin.Value); VSH.Chart.DefaultAxisXMax = new cExtendedList(); VSH.Chart.DefaultAxisXMax.Add((double)cGlobalInfo.OptionsWindow.numericUpDownManualMax.Value); if (cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxHTMLExportBackColorClass.Checked) VSH.Chart.BackgroundColor = TmpWell.GetClassColor(); } VSH.Chart.BinNumber = Desc.GetBinNumber(); VSH.Chart.IsShadow = false; VSH.Chart.IsBorder = false; VSH.Run(); ET[i].ListTags.Add((Chart)VSH.Chart); } else { cViewerHistogram VH = new cViewerHistogram(); VH.SetInputData(TmpET); VH.Chart.LabelAxisX = Desc.GetName(); VH.Chart.CurrentTitle.Text = TmpET.Name; if ((cGlobalInfo.OptionsWindow.radioButtonHistoDisplayManualMinMax.Checked) || (cGlobalInfo.OptionsWindow.radioButtonHistoDisplayAutomatedMinMax.Checked)) { VH.Chart.DefaultAxisXMin = new cExtendedList(); VH.Chart.DefaultAxisXMin.Add((double)cGlobalInfo.OptionsWindow.numericUpDownManualMin.Value); VH.Chart.DefaultAxisXMax = new cExtendedList(); VH.Chart.DefaultAxisXMax.Add((double)cGlobalInfo.OptionsWindow.numericUpDownManualMax.Value); if (cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxHTMLExportBackColorClass.Checked) VH.Chart.BackgroundColor = TmpWell.GetClassColor(); } VH.Run(); ET[i].ListTags.Add((Chart)VH.Chart); } } } MyProgressBar.Close(); cTableToHTML TToHTML = new cTableToHTML(); TToHTML.IsDisplayUIForFilePath = true; TToHTML.SetInputData(ET); TToHTML.Run(); }