protected override MetaMorpheusEngineResults RunSpecific()
{
ProteinScoringAndFdrResults myAnalysisResults = new ProteinScoringAndFdrResults(this);
ScoreProteinGroups(ProteinGroups, NewPsms);
myAnalysisResults.SortedAndScoredProteinGroups = DoProteinFdr(ProteinGroups);
return(myAnalysisResults);
}
protected override MetaMorpheusEngineResults RunSpecific()
{
ProteinScoringAndFdrResults myAnalysisResults = new ProteinScoringAndFdrResults(this);
Status("Running protein scoring and FDR engine!");
ScoreProteinGroups(proteinGroups, newPsms);
myAnalysisResults.sortedAndScoredProteinGroups = DoProteinFdr(proteinGroups);
return(myAnalysisResults);
}