/// <summary>
/// Constructor for the parameters of simulation.
/// </summary>
/// <param name="steppers">the list of stepper.</param>
/// <param name="initialConditions">the dictionary of the initial parameters.</param>
/// <param name="loggerPolicy">the logging policy.</param>
/// <param name="id">the simulation ID.</param>
public SimulationParameter(List<EcellObject> steppers,
Dictionary<string, Dictionary<string, double>> initialConditions,
LoggerPolicy loggerPolicy,
string id)
{
m_steppers = steppers;
m_initialConditions = initialConditions;
m_loggerPolicy = loggerPolicy;
m_id = id;
}
/// <summary>
/// Loads the eml formatted file and returns the model ID.
/// </summary>
public void LoadModel()
{
WrappedSimulator simulator = null;
try
{
foreach (string filename in m_info.Models)
{
simulator = CreateSimulatorInstance();
// Load model
string modelID = null;
EcellModel modelObj = null;
try
{
modelObj = EmlReader.Parse(filename, simulator);
}
catch (EcellException e)
{
throw new EcellException(string.Format(MessageResources.ErrLoadModel, filename), e);
}
catch (Exception e)
{
string msg = string.Format(MessageResources.ErrLoadModel, filename) + "\n" + e.Message;
Util.ShowErrorDialog(msg);
continue;
}
// If file is not Eml, return.
if (modelObj.Children == null || modelObj.Children.Count <= 0)
continue;
if (!string.IsNullOrEmpty(modelObj.ErrMsg) && m_env.PluginManager.DockPanel != null)
{
Util.ShowWarningDialog(MessageResources.WarnLoadDM);
m_env.Console.Write(modelObj.ErrMsg);
m_env.Console.Flush();
}
// If this project is template.
if (m_info.Type == ProjectType.Template)
modelObj.ModelID = m_info.Name;
modelID = modelObj.ModelID;
// Initialize
try
{
simulator.Initialize();
}
catch (Exception e)
{
// Error Message
// [VariableReference [S0] not found in this Process]
// MichaelisUniUniFluxprocess
// DecayFluxProcess
// [Only first or second order scheme is allowed]
// PingPongBiBiFluxProcess
// TauLeapProcess
if (m_env.PluginManager.DockPanel != null)
Util.ShowWarningDialog(MessageResources.WarnInvalidData + "\n" + e.Message);
Trace.WriteLine(e.ToString());
}
// Sets initial conditions.
InitializeModel(modelObj, simulator);
try
{
string leml = Path.GetDirectoryName(filename) + Path.DirectorySeparatorChar +
Path.GetFileNameWithoutExtension(filename) + Constants.FileExtLEML;
Leml.LoadLEML(m_env, modelObj, leml);
}
catch (Exception e)
{
Trace.WriteLine(e.StackTrace);
}
}
// If this project has no model.
if (m_modelList.Count <= 0)
throw new EcellException(string.Format(MessageResources.ErrNoSet, "Model"));
// Stores the "LoggerPolicy"
string simParam = m_info.SimulationParam;
if (!m_loggerPolicyDic.ContainsKey(simParam))
{
m_loggerPolicyDic[simParam] = new LoggerPolicy();
}
}
catch (Exception ex)
{
throw new EcellException(string.Format(MessageResources.ErrLoadModel, ""), ex);
}
m_simulator = simulator;
}
/// <summary>
/// Constructor to copy.
/// </summary>
/// <param name="rhs">the src object.</param>
public LoggerPolicy(LoggerPolicy rhs)
{
this.m_reloadStepCount = rhs.m_reloadStepCount;
this.m_reloadInterval = rhs.m_reloadInterval;
this.m_diskFullAction = rhs.m_diskFullAction;
this.m_maxDiskSpace = rhs.m_maxDiskSpace;
}
public void TestLoggerPolicy()
{
DiskFullAction expectedFullAction = DiskFullAction.Terminate;
int expectedMaxDiskSpace = 120;
double expectedReloadInterval = 0.1;
int expectedReloadStepCount = 111;
LoggerPolicy d = new LoggerPolicy();
d.DiskFullAction = expectedFullAction;
d.MaxDiskSpace = expectedMaxDiskSpace;
d.ReloadInterval = expectedReloadInterval;
d.ReloadStepCount = expectedReloadStepCount;
Assert.AreEqual(d.DiskFullAction, expectedFullAction, "LoggerPolicy Accessor returned unexpected value.");
Assert.AreEqual(d.MaxDiskSpace, expectedMaxDiskSpace, "LoggerPolicy Accessor returned unexpected value.");
Assert.AreEqual(d.ReloadInterval, expectedReloadInterval, "LoggerPolicy Accessor returned unexpected value.");
Assert.AreEqual(d.ReloadStepCount, expectedReloadStepCount, "LoggerPolicy Accessor returned unexpected value.");
LoggerPolicy dclone = (LoggerPolicy)d.Clone();
Assert.AreEqual(d.DiskFullAction, dclone.DiskFullAction, "LoggerPolicy clone execute unexpected action.");
Assert.AreEqual(d.ReloadStepCount, dclone.ReloadStepCount, "LoggerPolicy clone execute unexpected action.");
Assert.AreEqual(d.ReloadInterval, dclone.ReloadInterval, "LoggerPolicy clone execute unexpected action.");
Assert.AreEqual(d.MaxDiskSpace, dclone.MaxDiskSpace, "LoggerPolicy clone execute unexpected action.");
}
/// <summary>
/// Creates the logger policy with some parameters.
/// </summary>
/// <param name="savedStepCount">The saved step count</param>
/// <param name="savedInterval">The saved interval</param>
/// <param name="diskFullAction">The action if the HDD is full</param>
/// <param name="maxDiskSpace">The limit of the usable HDD</param>
public void CreateLoggerPolicy(
int savedStepCount,
double savedInterval,
DiskFullAction diskFullAction,
int maxDiskSpace)
{
LoggerPolicy loggerPolicy
= new LoggerPolicy(savedStepCount, savedInterval, diskFullAction, maxDiskSpace);
m_env.DataManager.SetLoggerPolicy(m_env.DataManager.GetCurrentSimulationParameterID(), loggerPolicy);
}
/// <summary>
/// Sets the logger policy of the logger.
/// </summary>
/// <param name="savedStepCount">the saved step count</param>
/// <param name="savedInterval">the saved interval</param>
/// <param name="diskFullAction">the HDD full action</param>
/// <param name="maxDiskSpace">the max HDD space</param>
public void SetLoggerPolicy(
int savedStepCount,
double savedInterval,
DiskFullAction diskFullAction,
int maxDiskSpace)
{
LoggerPolicy loggerPolicy
= new LoggerPolicy(savedStepCount, savedInterval, diskFullAction, maxDiskSpace);
m_cManager.DataManager.SetLoggerPolicy(this.m_parameterID, loggerPolicy);
}
/// <summary>
/// Delates the simulation parameter stub.
/// </summary>
public void Delete()
{
m_cManager.DataManager.DeleteSimulationParameter(this.m_parameterID);
this.m_parameterID = null;
this.m_loggerPolicy = new LoggerPolicy();
this.m_stepperList = null;
this.m_initialCondition = null;
}
/// <summary>
/// Creates the simulation parameter ID.
/// </summary>
public void Create()
{
Debug.Assert(!string.IsNullOrEmpty(m_cManager.ModelID));
//
// Already get
//
if (this.m_stepperList != null)
{
return;
}
//
// Searches the simulation parameter.
//
bool existFlag = false;
foreach (string parameterID in m_cManager.GetSimulationParameterIDList())
{
if (this.m_parameterID.Equals(parameterID))
{
existFlag = true;
break;
}
}
if (!existFlag)
{
m_cManager.DataManager.CreateSimulationParameter(this.m_parameterID);
}
//
// Searches the loaded "Stepper".
//
this.m_stepperList
= m_cManager.DataManager.GetStepper(m_cManager.ModelID);
//
// Searches the loaded "LoggerPolicy".
//
this.m_loggerPolicy = m_cManager.DataManager.GetLoggerPolicy(this.m_parameterID);
//
// Searches the loaded "InitialCondition".
//
this.m_initialCondition
= m_cManager.DataManager.GetInitialCondition(
this.m_parameterID, m_cManager.ModelID);
}
/// <summary>
/// CreateLogger
/// </summary>
/// <param name="fullPathID">The FullPathID to set the logger.</param>
/// <param name="isInitalize">The flag whether this logger is initialized.</param>
/// <param name="sim">The current simulator.</param>
/// <param name="loggerPolicy">The current logger policy.</param>
private void CreateLogger(string fullPathID, bool isInitalize, WrappedSimulator sim, LoggerPolicy loggerPolicy)
{
if (m_loggerEntry.Contains(fullPathID))
return;
if (m_currentProject.SimulationStatus == SimulationStatus.Run ||
m_currentProject.SimulationStatus == SimulationStatus.Suspended ||
isInitalize)
{
sim.CreateLogger(fullPathID,
loggerPolicy.ReloadStepCount,
loggerPolicy.ReloadInterval,
Convert.ToBoolean((int)loggerPolicy.DiskFullAction),
loggerPolicy.MaxDiskSpace);
m_currentProject.LogableEntityPathDic[fullPathID] = m_currentProject.Model.FullID;
}
m_loggerEntry.Add(fullPathID);
}
/// <summary>
/// Sets the "LoggerPolicy".
/// </summary>
/// <param name="parameterID">The parameter ID</param>
/// <param name="loggerPolicy">The "LoggerPolicy"</param>
public void SetLoggerPolicy(string parameterID, LoggerPolicy loggerPolicy)
{
m_currentProject.LoggerPolicyDic[parameterID] = loggerPolicy;
}
/// <summary>
/// Creates the "LoggerPolicy" elements.
/// </summary>
/// <param name="loggerPolicy">The "LoggerPolicy"</param>
private void WriteLoggerPolicyElement(LoggerPolicy loggerPolicy)
{
m_tx.WriteStartElement(Constants.xpathLoggerPolicy.ToLower());
m_tx.WriteElementString(
Constants.xpathStep.ToLower(),
null,
System.Environment.NewLine + loggerPolicy.ReloadStepCount + System.Environment.NewLine
);
m_tx.WriteElementString(
Constants.xpathInterval.ToLower(),
null,
System.Environment.NewLine + loggerPolicy.ReloadInterval + System.Environment.NewLine
);
m_tx.WriteElementString(
Constants.xpathAction.ToLower(),
null,
System.Environment.NewLine + (loggerPolicy.DiskFullAction == DiskFullAction.Terminate? 0 : 1) + System.Environment.NewLine
);
m_tx.WriteElementString(
Constants.xpathSpace.ToLower(),
null,
System.Environment.NewLine + loggerPolicy.MaxDiskSpace + System.Environment.NewLine
);
m_tx.WriteEndElement();
}
public void TestSetLoggerPolicy()
{
_unitUnderTest.LoadProject(TestConstant.Project_Drosophila);
string l_parameterID = null;
LoggerPolicy l_loggerPolicy = new LoggerPolicy();
LoggerPolicy expectedl_loggerPolicy = new LoggerPolicy();
try
{
_unitUnderTest.SetLoggerPolicy(l_parameterID, l_loggerPolicy);
Assert.Fail();
}
catch (Exception)
{
}
l_parameterID = "DefaultParameter";
_unitUnderTest.SetLoggerPolicy(l_parameterID, l_loggerPolicy);
Assert.IsNotNull(l_loggerPolicy, "l_loggerPolicy ref parameter has unexpected result.");
Assert.AreNotEqual(expectedl_loggerPolicy, l_loggerPolicy, "l_loggerPolicy ref parameter has unexpected result.");
}