/// <summary> /// Loads the <see cref="Series"/> and instance mappings from the specified file. /// </summary> /// <param name="path"></param> public void Load(string path) { if (File.Exists(path)) { XmlDocument doc = new XmlDocument(); doc.Load(path); UidMapXml copy = XmlUtils.Deserialize <UidMapXml>(doc); StudyUidMaps = copy.StudyUidMaps; } }
public UidMapper(UidMapXml xml) { foreach(StudyUidMap studyMap in xml.StudyUidMaps) { _studyMap.Add(studyMap.Source, studyMap.Target); foreach (Map seriesMap in studyMap.Series) _seriesMap.Add(seriesMap.Source, new SeriesMapping { OriginalSeriesUid = seriesMap.Source, NewSeriesUid = seriesMap.Target }); foreach (Map sopMap in studyMap.Instances) _sopMap.Add(sopMap.Source, sopMap.Target); } }
protected void LoadUidMappings() { // Load the mapping for the study if (_destinationStudyStorage != null) { string path = Path.Combine(_destinationStudyStorage.GetStudyPath(), "UidMap.xml"); if (File.Exists(path)) { UidMapXml xml = new UidMapXml(); xml.Load(_destinationStudyStorage); UidMapper = new UidMapper(xml); UidMapper.SeriesMapUpdated += UidMapper_SeriesMapUpdated; } } }
public void Save(string path) { lock (_sync) { UidMapXml xml = new UidMapXml(); xml.StudyUidMaps = new List<StudyUidMap>(); foreach (var entry in _studyMap) { StudyUidMap studyMap = new StudyUidMap {Source = entry.Key, Target = entry.Value}; xml.StudyUidMaps.Add(studyMap); studyMap.Series = new List<Map>(); foreach (SeriesMapping seriesMap in _seriesMap.Values) { studyMap.Series.Add(new Map {Source = seriesMap.OriginalSeriesUid, Target = seriesMap.NewSeriesUid}); } studyMap.Instances = new List<Map>(); foreach (var sop in _sopMap) { studyMap.Instances.Add(new Map {Source = sop.Key, Target = sop.Value}); } } XmlDocument doc = XmlUtils.SerializeAsXmlDoc(xml); doc.Save(path); Dirty = false; } }
private AutoReconcilerResult MergeImage(StudyReconcileAction action, DicomFile file, StudyHistory lastHistory) { string originalSeriesUid = file.DataSet[DicomTags.SeriesInstanceUid].ToString(); string originalSopUid = file.DataSet[DicomTags.SopInstanceUid].ToString(); AutoReconcilerResult preProcessingResult = null; StudyStorageLocation destStudy; UidMapper uidMapper = null; if (lastHistory.DestStudyStorageKey != null) { StudyStorage destinationStudy = StudyStorage.Load(lastHistory.DestStudyStorageKey); //Load the destination. An exception will be thrown if any issues are encountered. FilesystemMonitor.Instance.GetWritableStudyStorageLocation(destinationStudy.ServerPartitionKey, destinationStudy.StudyInstanceUid, StudyRestore.True, StudyCache.True, out destStudy); EnsureStudyCanBeUpdated(destStudy); bool belongsToAnotherStudy = !destStudy.Equals(StorageLocation); ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder(); IList<BaseImageLevelUpdateCommand> commands = commandBuilder.BuildCommands<StudyMatchingMap>(destStudy); if (belongsToAnotherStudy) { Platform.Log(LogLevel.Info, "AUTO-RECONCILE: Move SOP {0} to Study {1}, A#: {2}, Patient {3}", originalSopUid, destStudy.StudyInstanceUid, destStudy.Study.AccessionNumber, destStudy.Study.PatientsName); // Load the Uid Map, either from cache or from disk if (!_uidMapCache.TryGetValue(destStudy.Key, out uidMapper)) { UidMapXml mapXml = new UidMapXml(); mapXml.Load(destStudy); uidMapper = new UidMapper(mapXml); _uidMapCache.Add(destStudy.Key, uidMapper); } try { commands.Add(GetUidMappingCommand(StorageLocation, destStudy, uidMapper, originalSopUid, originalSeriesUid)); } catch (InstanceAlreadyExistsException ex) { Platform.Log(LogLevel.Info, "An instance already exists with the SOP Instance Uid {0}", ex.SopInstanceUid); preProcessingResult = new AutoReconcilerResult(StudyReconcileAction.Discard) { DiscardImage = true }; return preProcessingResult; } } preProcessingResult = new AutoReconcilerResult(action) { Changes = GetUpdateList(file, commands) }; UpdateImage(file, commands); // First, must update the map if (uidMapper != null && uidMapper.Dirty) { UpdateUidMap(destStudy, uidMapper); } if (belongsToAnotherStudy) { SopInstanceImporterContext importContext = new SopInstanceImporterContext(_contextID, file.SourceApplicationEntityTitle, destStudy.ServerPartition); SopInstanceImporter importer = new SopInstanceImporter(importContext); DicomProcessingResult result = importer.Import(file); if (!result.Successful) { throw new ApplicationException(result.ErrorMessage); } } } return preProcessingResult; }