protected override void OnExecute(CommandProcessor theProcessor)
{
Platform.CheckForNullReference(Context, "Context");
Platform.CheckForNullReference(Context.ReconcileWorkQueueData, "Context.ReconcileWorkQueueData");
foreach (WorkQueueUid uid in Context.WorkQueueUidList)
{
string imagePath = GetReconcileUidPath(uid);
try
{
using (var processor = new ServerCommandProcessor(String.Format("Deleting {0}", uid.SopInstanceUid)))
{
var deleteFile = new FileDeleteCommand(imagePath, true);
var deleteUid = new DeleteWorkQueueUidCommand(uid);
processor.AddCommand(deleteFile);
processor.AddCommand(deleteUid);
Platform.Log(ServerPlatform.InstanceLogLevel, deleteFile.ToString());
if (!processor.Execute())
{
throw new Exception(String.Format("Unable to discard image {0}", uid.SopInstanceUid));
}
}
}
catch (Exception e)
{
Platform.Log(LogLevel.Error, e, "Unexpected exception discarding file: {0}", imagePath);
SopInstanceProcessor.FailUid(uid, true);
}
}
}
private void ProcessSeriesLevelDelete(Model.WorkQueue item)
{
// ensure the Study is loaded.
Study study = StorageLocation.Study;
Platform.CheckForNullReference(study, "Study record doesn't exist");
Platform.Log(LogLevel.Info, "Processing Series Level Deletion for Study {0}, A#: {1}",
study.StudyInstanceUid, study.AccessionNumber);
_seriesToDelete = new List<Series>();
bool completed = false;
try
{
// Load the list of Series to be deleted from the WorkQueueUid
LoadUids(item);
// Go through the list of series and add commands
// to delete each of them. It's all or nothing.
using (ServerCommandProcessor processor = new ServerCommandProcessor(String.Format("Deleting Series from study {0}, A#:{1}, Patient: {2}, ID:{3}", study.StudyInstanceUid, study.AccessionNumber, study.PatientsName, study.PatientId)))
{
StudyXml studyXml = StorageLocation.LoadStudyXml();
IDictionary<string, Series> existingSeries = StorageLocation.Study.Series;
// Add commands to delete the folders and update the xml
foreach (WorkQueueUid uid in WorkQueueUidList)
{
// Delete from study XML
if (studyXml.Contains(uid.SeriesInstanceUid))
{
//Note: DeleteDirectoryCommand doesn't throw exception if the folder doesn't exist
var xmlUpdate = new RemoveSeriesFromStudyXml(studyXml, uid.SeriesInstanceUid);
processor.AddCommand(xmlUpdate);
}
// Delete from filesystem
string path = StorageLocation.GetSeriesPath(uid.SeriesInstanceUid);
if (Directory.Exists(path))
{
var delDir = new DeleteDirectoryCommand(path, true);
processor.AddCommand(delDir);
}
}
// flush the updated xml to disk
processor.AddCommand(new SaveXmlCommand(studyXml, StorageLocation));
// Update the db.. NOTE: these commands are executed at the end.
foreach (WorkQueueUid uid in WorkQueueUidList)
{
// Delete from DB
WorkQueueUid queueUid = uid;
Series theSeries = existingSeries[queueUid.SeriesInstanceUid];
if (theSeries!=null)
{
_seriesToDelete.Add(theSeries);
var delSeries = new DeleteSeriesFromDBCommand(StorageLocation, theSeries);
processor.AddCommand(delSeries);
delSeries.Executing += DeleteSeriesFromDbExecuting;
}
else
{
// Series doesn't exist
Platform.Log(LogLevel.Info, "Series {0} is invalid or no longer exists", uid.SeriesInstanceUid);
}
// The WorkQueueUid must be cleared before the entry can be removed from the queue
var deleteUid = new DeleteWorkQueueUidCommand(uid);
processor.AddCommand(deleteUid);
// Force a re-archival if necessary
processor.AddCommand(new InsertArchiveQueueCommand(item.ServerPartitionKey, item.StudyStorageKey));
}
if (!processor.Execute())
throw new ApplicationException(
String.Format("Error occurred when series from Study {0}, A#: {1}",
study.StudyInstanceUid, study.AccessionNumber), processor.FailureException);
else
{
foreach (Series series in _seriesToDelete)
{
OnSeriesDeleted(series);
}
}
}
completed = true;
}
finally
{
if (completed)
{
OnCompleted();
PostProcessing(item, WorkQueueProcessorStatus.Complete, WorkQueueProcessorDatabaseUpdate.ResetQueueState);
}
else
{
PostProcessing(item, WorkQueueProcessorStatus.Pending, WorkQueueProcessorDatabaseUpdate.None);
}
}
}
/// <summary>
/// Removes all WorkQueueUids from the database and delete the corresponding DICOM files from the filesystem.
/// </summary>
private void ProcessWorkQueueUids()
{
if (Study == null)
Platform.Log(LogLevel.Info, "Begin StudyProcess Cleanup (Study has not been created): Attempt #{0}. {1} unprocessed files will be removed",
WorkQueueItem.FailureCount + 1,
WorkQueueUidList.Count);
else
Platform.Log(LogLevel.Info,
"Begin StudyProcess Cleanup for study {0}, Patient {1} (PatientId:{2} A#:{3}) on Partition {4}. Attempt #{5}. {6} unprocessed files will be removed",
Study.StudyInstanceUid, Study.PatientsName, Study.PatientId,
Study.AccessionNumber, ServerPartition.Description,
WorkQueueItem.FailureCount + 1,
WorkQueueUidList.Count
);
foreach (WorkQueueUid sop in WorkQueueUidList)
{
string path = GetFileStoredPath(sop);
Platform.Log(LogLevel.Info, "Cleaning up {0}", path);
using (ServerCommandProcessor processor = new ServerCommandProcessor(String.Format("Deleting {0}", sop.SopInstanceUid)))
{
// delete the file
FileDeleteCommand deleteFile = new FileDeleteCommand(path, true);
processor.AddCommand(deleteFile);
// delete the WorkQueueUID from the database
DeleteWorkQueueUidCommand deleteUid = new DeleteWorkQueueUidCommand(sop);
processor.AddCommand(deleteUid);
try
{
// delete the directory (if empty)
var fileInfo = new FileInfo(path);
ClearCanvas.ImageServer.Core.Command.DeleteDirectoryCommand deleteDir = new ClearCanvas.ImageServer.Core.Command.DeleteDirectoryCommand(fileInfo.Directory.FullName, false, true);
processor.AddCommand(deleteDir);
}
catch (DirectoryNotFoundException ex)
{
// ignore
}
if (!processor.Execute())
{
throw new Exception(String.Format("Unable to delete SOP {0}", sop.SopInstanceUid), processor.FailureException);
}
}
// Delete the base directory if it's empty
var baseDir = GetBaseDirectory(sop);
if (Directory.Exists(baseDir))
{
using (ServerCommandProcessor processor = new ServerCommandProcessor(String.Format("Deleting {0}", sop.SopInstanceUid)))
{
ClearCanvas.ImageServer.Core.Command.DeleteDirectoryCommand deleteDir = new ClearCanvas.ImageServer.Core.Command.DeleteDirectoryCommand(baseDir, false, true);
processor.AddCommand(deleteDir);
if (!processor.Execute())
{
throw new Exception(String.Format("Unable to delete {0}", baseDir), processor.FailureException);
}
}
}
}
}
private void ProcessUid(WorkQueueUid uid)
{
Platform.CheckForNullReference(uid, "uid");
string imagePath = GetUidPath(uid);
using (ServerCommandProcessor processor = new ServerCommandProcessor(String.Format("Deleting {0}", uid.SopInstanceUid)))
{
// If the file for some reason doesn't exist, we just ignore it
if (File.Exists(imagePath))
{
Platform.Log(ServerPlatform.InstanceLogLevel, "Deleting {0}", imagePath);
FileDeleteCommand deleteFile = new FileDeleteCommand(imagePath, true);
processor.AddCommand(deleteFile);
}
else
{
Platform.Log(LogLevel.Warn, "WARNING {0} is missing.", imagePath);
}
DeleteWorkQueueUidCommand deleteUid = new DeleteWorkQueueUidCommand(uid);
processor.AddCommand(deleteUid);
if (!processor.Execute())
{
throw new Exception(String.Format("Unable to delete image {0}", uid.SopInstanceUid));
}
}
}