/// <summary>
/// Creates an instance of PaddedDouble from a file in PaddedDouble format.
/// </summary>
/// <param name="paddedDoubleFileName">a file in PaddedDouble format</param>
/// <param name="parallelOptions">A ParallelOptions instance that configures the multithreaded behavior of this operation.</param>
/// <returns>The created PaddedDouble</returns>
public static PaddedDouble GetInstance(string paddedDoubleFileName, ParallelOptions parallelOptions)
{
PaddedDouble paddedDouble = new PaddedDouble();
paddedDouble.GetInstanceInternal(paddedDoubleFileName, parallelOptions);
return(paddedDouble);
}
/// <summary>
/// Create a PaddedDouble object from a sequence of RowKeyColKeyValue triples.
/// </summary>
/// <param name="tripleEnumerable">a sequence of RowKeyColKeyValue</param>
/// <returns>A PaddedDouble object</returns>
public static PaddedDouble GetInstanceFromSparse(IEnumerable <RowKeyColKeyValue <string, string, double> > tripleEnumerable)
{
PaddedDouble paddedDouble = new PaddedDouble();
paddedDouble.GetInstanceFromSparseInternal(tripleEnumerable);
return(paddedDouble);
}
/// <summary>
/// Create an instance of PaddedDouble from a sparse input file
/// </summary>
/// <param name="inputSparsePattern">The sparse input file</param>
/// <returns>A PaddedDouble</returns>
public static PaddedDouble GetInstanceFromSparse(string inputSparsePattern)
{
PaddedDouble paddedDouble = new PaddedDouble();
paddedDouble.GetInstanceFromSparseInternal(inputSparsePattern);
return(paddedDouble);
}
/// <summary>
/// Create an empty instance of a PaddedDouble file
/// </summary>
/// <param name="rowKeySequence">A sequence of row keys. The items will become the RowKeys of the Matrix.</param>
/// <param name="colKeySequence">A sequence of colKeys. The items will come the ColKeys of the Matrix.</param>
/// <param name="missingValue">The special value that represents missing</param>
/// <returns>An empty PaddedDouble instance</returns>
static public PaddedDouble CreateEmptyInstance(IEnumerable <string> rowKeySequence, IEnumerable <string> colKeySequence, double missingValue)
{
Helper.CheckCondition(missingValue.Equals(StaticMissingValue), "For PaddedDouble the missingValue must be '{0}'", StaticMissingValue); //OK to use Equals because double can't be null
PaddedDouble paddedDouble = new PaddedDouble();
paddedDouble.InternalCreateEmptyInstance(rowKeySequence, colKeySequence);
return(paddedDouble);
}
#pragma warning disable 1591
protected override byte[] ValueOrMissingToByteArray(double value)
#pragma warning restore 1591
{
System.Text.ASCIIEncoding encoding = new System.Text.ASCIIEncoding();
string s = PaddedDouble.StoreToSparseVal(value);
byte[] byteArray = encoding.GetBytes(s);
return(byteArray);
}
/// <summary>
/// Converts matrix to a PaddedDouble. Even if the matrix is already an paddedDouble, a new one is created..
/// </summary>
/// <param name="matrix">The matrix to convert from</param>
/// <param name="parallelOptions">A ParallelOptions instance that configures the multithreaded behavior of this operation.</param>
/// <returns>A paddedDouble version of the matrix</returns>
public static PaddedDouble ToPaddedDouble(this Matrix <string, string, double> matrix, ParallelOptions parallelOptions)
{
var paddedDouble = PaddedDouble.CreateEmptyInstance(matrix.RowKeys, matrix.ColKeys, PaddedDouble.StaticMissingValue);
//Console.WriteLine("Convert no more than {0} values", matrix.RowCount * matrix.ColCount);
//CounterWithMessages counterWithMessages = new CounterWithMessages("adding value #{0}", 100000, null);
Parallel.ForEach(matrix.RowKeyColKeyValues, parallelOptions, triple =>
{
//counterWithMessages.Increment();
paddedDouble[triple.RowKey, triple.ColKey] = triple.Value;
});
return(paddedDouble);
}
/// <summary>
/// Create an instance of PaddedDouble from a sparse input file
/// </summary>
/// <param name="inputSparsePattern">The sparse input file</param>
/// <param name="paddedDouble">The PaddedDouble matrix created</param>
/// <returns>true if the file parses as PaddedDouble; otherwise, false</returns>
public static bool TryGetInstanceFromSparse(string inputSparsePattern, out PaddedDouble paddedDouble)
{
try
{
paddedDouble = GetInstanceFromSparse(inputSparsePattern);
return(true);
}
catch
{
paddedDouble = null;
return(false);
}
}
//Similar code elsewhere, but hard to move static code to common location
//Would be nice if could work from, say Matrix<string,string,int>
/// <summary>
/// Write in PaddedDouble file format to a TextWriter
/// </summary>
/// <param name="matrix">The matrix to write</param>
/// <param name="textWriter">The TextWriter to write to</param>
/// <param name="parallelOptions">A ParallelOptions instance that configures the multithreaded behavior of this operation.</param>
public static void WritePaddedDouble(this Matrix <string, string, double> matrix, TextWriter textWriter, ParallelOptions parallelOptions)
{
textWriter.WriteLine("var\t{0}", matrix.ColKeys.StringJoin("\t"));
foreach (string rowKey in matrix.RowKeys)
{
textWriter.Write(rowKey);
textWriter.Write("\t");
int rowIndex = matrix.IndexOfRowKey[rowKey];
List <double> storeList = new List <double>(matrix.ColCount);
for (int colIndex = 0; colIndex < matrix.ColCount; ++colIndex)
{
double store;
if (!matrix.TryGetValue(rowIndex, colIndex, out store))
{
store = PaddedDouble.StaticStoreMissingValue;
}
storeList.Add(store);
}
Helper.CheckCondition(storeList.Count == matrix.ColCount, "Assert");
string s = PaddedDouble.StoreListToString(storeList, matrix.ColCount);
textWriter.WriteLine(s);
}
}