public void TestSimpleExecution()
{
//string xmlContent =
// "<?xml version='1.0' encoding='utf-16'?> <BioWFML> <Workflow name='eLabDemoWorkflow-godbless' description='Auto generated wf'> <BeginFlow> <FlowElement level='0'> <Sequential> <Activity clsname='Microsoft.Research.ScientificWorkflow.Activities.WriteToConsole' id='WriteToConsole_0'> <InputValue name='InputText' value='helloWorld' /> </Activity> </Sequential> </FlowElement> </BeginFlow> </Workflow> </BioWFML>";
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestParseDoubleSequential()
{
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("sequential_1", Node1);
workflowMang.AddActivities("sequential_2", Node2);
workflowMang.AddActivityLink("start_0", "sequential_1");
workflowMang.AddActivityLink("sequential_1", "sequential_2");
string xmlContent = workflowMang.GetWorkflowXML();
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestExecuteWorkflow()
{
string xmlContent =
"<?xml version='1.0' encoding='utf-16'?> " +
" <BioWFML> " +
" <Workflow name='TestBioPatMLSample1' description='Auto generated wf'> " +
" <BeginFlow> " +
" <FlowElement level='0'> " +
" <Parallel> " +
" <Activity clsname='BioPatMLActivities.BioPatMLParser' id='BioPatMLParser_3'> " +
" <InputValue name='BioPatFilePath' value='D:\\TestData\\BioPatML\\Motif.xml' /> " +
" </Activity> " +
" <Activity clsname='MBF.Workflow.GenBankParserActivity' id='GenBankParserActivity_4'> " +
" <InputValue name='InputFile' value='D:\\TestData\\GenBank\\AE001582.gbk' /> " +
" </Activity> " +
" </Parallel> " +
" </FlowElement> " +
" <FlowElement level='1'> " +
" <Sequential> " +
" <Activity clsname='BioPatMLActivities.BioPatSeeker' id='BioPatSeeker_1'> " +
" <InputValue name='ListMBFSequence' linkFrom='GenBankParserActivity_4.SequenceList' /> " +
" <InputValue name='PatternModel' linkFrom='BioPatMLParser_3.PatternDefinition' /> " +
" </Activity> " +
" </Sequential> " +
" </FlowElement> " +
" <FlowElement level='2'> " +
" <Sequential> " +
" <Activity clsname='BioPatMLActivities.HitsViewer' id='HitsViewer_2'> " +
" <InputValue name='ListHits' linkFrom='BioPatSeeker_1.Hits' /> " +
" <InputValue name='Index' value='1' /> " +
" <OutputValue name='MatchDetails' dataValue='true' /> " +
" </Activity> " +
" </Sequential> " +
" </FlowElement> " +
" </BeginFlow> " +
" </Workflow> " +
" </BioWFML> ";
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestParseNestedParallels()
{
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("Item_1", Node1);
workflowMang.AddActivities("Item_2", Node2);
workflowMang.AddActivities("Item_3", Node3);
workflowMang.AddActivities("Item_4", Node4);
workflowMang.AddActivities("Item_5", Node5);
//First parallel
workflowMang.AddActivityLink("start_0", "Item_1");
workflowMang.AddActivityLink("start_0", "Item_2");
//Nested Parallel
workflowMang.AddActivityLink("Item_2", "Item_3");
workflowMang.AddActivityLink("Item_2", "Item_4");
workflowMang.AddActivityLink("Item_1", "Item_5");
string xmlContent = workflowMang.GetWorkflowXML();
// System.Diagnostics.Debug.WriteLine(xmlContent);
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestParseSequentialInParallel()
{
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("sequential_1", Node1);
workflowMang.AddActivities("sequential_2", Node2);
workflowMang.AddActivityLink("start_0", "sequential_1");
workflowMang.AddActivityLink("start_0", "sequential_2");
string xmlContent = workflowMang.GetWorkflowXML();
//System.Diagnostics.Debug.WriteLine(xmlContent);
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestFinalizeProduct()
{
ParamOutputModel outputParam1 = new ParamOutputModel()
{
Name = "SequenceList",
DataType = "System.Collection.Generic.IList<Sequence>",
AsDataOutput = true
};
Node1.OutboundParam.Add(outputParam1);
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("Item_1", Node1);
workflowMang.AddActivities("Item_2", Node2);
//double sequential activities
workflowMang.AddActivityLink("start_0", "Item_1");
workflowMang.AddActivityLink("Item_1", "Item_2");
string xmlContent = workflowMang.GetWorkflowXML();
System.Diagnostics.Debug.WriteLine("Test highlighting output param as data product in trident");
System.Diagnostics.Debug.WriteLine(xmlContent);
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestReadAdvParamBinderFrmXML()
{
ParamBinder binder = new ParamBinder("Node_1", "SequenceList");
ParamInputModel inputParam1 = new ParamInputModel()
{
Name = "InputText",
DataType = "System.String",
Value = binder
};
Node2.InputParam.Add(inputParam1);
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("Item_1", Node1);
workflowMang.AddActivities("Item_2", Node2);
//double sequential activities
workflowMang.AddActivityLink("start_0", "Item_1");
workflowMang.AddActivityLink("Item_1", "Item_2");
string xmlContent = workflowMang.GetWorkflowXML();
System.Diagnostics.Debug.WriteLine("Test Case - Adv linkage param value");
System.Diagnostics.Debug.WriteLine(xmlContent);
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}
public void TestReadBasicParamValuesFrmXML()
{
ParamInputModel inputParam1 = new ParamInputModel()
{
Name = "InputFile",
DataType = "System.String",
ValueStr = "C:\\TestDocument.txt"
};
ParamInputModel inputParam2 = new ParamInputModel()
{
Name = "InputText",
DataType = "System.String",
ValueStr = "HelloWorld"
};
Node1.InputParam.Add(inputParam1);
Node2.InputParam.Add(inputParam2);
workflowMang.AddActivities("start_0", StartNode);
workflowMang.AddActivities("Item_1", Node1);
workflowMang.AddActivities("Item_2", Node2);
//First parallel
workflowMang.AddActivityLink("start_0", "Item_1");
workflowMang.AddActivityLink("start_0", "Item_2");
System.Diagnostics.Debug.WriteLine("Test Case - direct inputvalue for param");
string xmlContent = workflowMang.GetWorkflowXML();
System.Diagnostics.Debug.WriteLine(xmlContent);
workflowsvc.WorkflowServiceClient service = new workflowsvc.WorkflowServiceClient();
//service.SaveANDExecuteWFAsync(xmlContent);
}