private List <string> ReadMedicationOrderWorkSheet(TokenStringViewModel viewModel, ExcelWorksheet wk)
{
if (wk.Name != "Med Order Information" ||
((string)wk.Cells[1, 1].Value).Trim() != "Medication ID # (Pocket Nurse item ID)" ||
((string)wk.Cells[1, 2].Value).Trim() != "Medication Name" ||
((string)wk.Cells[1, 3].Value).Trim() != "Dose" ||
((string)wk.Cells[1, 4].Value).Trim() != "Frequency" ||
((string)wk.Cells[1, 5].Value).Trim() != "Route" ||
(((string)wk.Cells[1, 6].Value).Trim() != "Patient ID" && ((string)wk.Cells[1, 6].Value).Trim() != "Patient ID 1"))
{
// Identification
ModelState.AddModelError("medication-order", "This doesn't appear to be a medication-order worksheet");
return(new List <string>());
}
if (wk.Dimension.Rows <= 1)
{
// Not enough rows (no medication orders)
ModelState.AddModelError("medication-order", $"No medication orders {wk.Dimension.Rows}");
}
else
{
// Process data for this sheet
// Skip the headers
for (int i = wk.Dimension.Start.Row + 1;
i <= wk.Dimension.End.Row;
i++)
{
// Order not associated with a patient?
if (wk.Cells[i, 6].Value == null)
{
continue;
}
var medicationOrder = new MedicationOrderRaw();
var patientIdIndex = 6;
do
{
var patientId = Convert.ToString(wk.Cells[i, patientIdIndex].Value);
medicationOrder.PatientIdList.Add(patientId);
} while (patientIdIndex > wk.Dimension.End.Column ||
wk.Cells[i, patientIdIndex].Value == null);
medicationOrder.PocketNurseItemId = Convert.ToString(wk.Cells[i, 1].Value);
medicationOrder.MedicationName = (string)wk.Cells[i, 2].Value;
medicationOrder.Dose = Convert.ToString(wk.Cells[i, 3].Value);
medicationOrder.Frequency = Convert.ToString(wk.Cells[i, 4].Value);
medicationOrder.Route = Convert.ToString(wk.Cells[i, 5].Value);
viewModel.AddMedicationOrder(medicationOrder);
}
}
return(viewModel.MedicationOrders);
}
private List <string> ReadNotInFormularyWorkSheet(TokenStringViewModel viewModel, ExcelWorksheet wk)
{
var retval = new List <NotInFormulary>();
if (wk.Dimension.Rows <= 1)
{
// Not enough rows (not in formulary)
ModelState.AddModelError("notinformulary", $"No NotInFormulary rows {wk.Dimension.Rows}");
}
else if (wk.Dimension.Columns < 8)
{
// Not enough columns (not in formulary)
ModelState.AddModelError("notinformulary", $"Not enough NotInFormulary columns {wk.Dimension.Columns}");
}
else if (wk.Name != "Items not in PN formulary" ||
((string)wk.Cells[1, 1].Value).Trim() != "Generic Name" ||
((string)wk.Cells[1, 2].Value).Trim() != "Alias" ||
((string)wk.Cells[1, 3].Value).Trim() != "Strength" ||
((string)wk.Cells[1, 4].Value).Trim() != "Unit" ||
((string)wk.Cells[1, 5].Value).Trim() != "volume" ||
((string)wk.Cells[1, 6].Value).Trim() != "unit" ||
(((string)wk.Cells[1, 7].Value).Trim() != "Total container volume for Liq/Inj" && ((string)wk.Cells[1, 7].Value).Trim() != "Total container volume for Liq/IV") ||
((string)wk.Cells[1, 8].Value).Trim() != "Route")
{
// Identification
ModelState.AddModelError("notinformulary", "This doesn't appear to be a notinformulary worksheet");
}
else
{
// Process data for this sheet
// Skip the headers
for (int i = wk.Dimension.Start.Row + 1;
i <= wk.Dimension.End.Row;
i++)
{
viewModel.AddNotInFormulary(new NotInFormulary()
{
_id = -1,
GenericName = (string)wk.Cells[i, 1].Value,
Alias = (string)wk.Cells[i, 2].Value,
Strength = wk.Cells[i, 3].Value == null ? string.Empty : wk.Cells[i, 3].Value.GetType() == typeof(string) ? (string)wk.Cells[i, 3].Value : Convert.ToString(wk.Cells[i, 3].Value),
StrengthUnit = (string)wk.Cells[i, 4].Value,
Volume = wk.Cells[i, 5].Value == null ? string.Empty : wk.Cells[i, 5].Value.GetType() == typeof(string) ? (string)wk.Cells[i, 5].Value : Convert.ToString(wk.Cells[i, 5].Value),
VolumeUnit = (string)wk.Cells[i, 6].Value,
TotalContainerVolume = (string)wk.Cells[i, 7].Value,
Route = (string)wk.Cells[i, 8].Value,
});
}
}
return(viewModel.NotInFormulary);
}
public IActionResult Upload(IFormFile file)
{
// Bail out of the file was not uploaded
if (file == null)
{
// No file
ModelState.AddModelError("cabinet", "NULL file passed to Upload action in Import controller");
return(RedirectToAction("Index"));
}
if (Path.GetExtension(file.FileName) != ".xlsx")
{
// Invalid file type (extension)
ModelState.AddModelError("cabinet", "Invalid file extension to Upload action in Import controller");
return(RedirectToAction("Index"));
}
long size = file.Length;
if (file.Length > 0)
{
//var appUser = await GetCurrentUserAsync();
var appUser = _userRepository.CurrentUser();
// process uploaded file
// Don't rely on or trust the FileName property without validation.
using (var pck = new OfficeOpenXml.ExcelPackage())
{
using (var stream = file.OpenReadStream())
{
pck.Load(stream);
}
var wsCount = pck.Workbook.Worksheets.Count();
// There should be four worksheets
if (wsCount < 4)
{
// Not enough worksheets
ModelState.AddModelError("cabinet", $"Not enough worksheets -> {pck.Workbook.Worksheets.Count}");
return(RedirectToAction("Index"));
}
OmniSession session = ReadSessionWorkSheet(pck.Workbook.Worksheets[0]);
if (session == null)
{
return(RedirectToAction("Index"));
}
var viewModel = new TokenStringViewModel(session);
var patientList = ReadPatientWorkSheet(viewModel, pck.Workbook.Worksheets[1]);
var medicationOrderList = ReadMedicationOrderWorkSheet(viewModel, pck.Workbook.Worksheets[2]);
var notInFormularyList = ReadNotInFormularyWorkSheet(viewModel, pck.Workbook.Worksheets[3]);
viewModel.WriteToFiles();
return(View(viewModel));
}
}
return(NotFound());
}
private List <string> ReadPatientWorkSheet(TokenStringViewModel viewModel, ExcelWorksheet wk)
{
// Not enough rows to include header and data for patient
if (wk.Dimension.Rows <= 1)
{
// Not enough rows
ModelState.AddModelError("patient", $"Patient worksheet doesn't have enough rows {wk.Dimension.Rows}");
return(new List <string>());
}
if (wk.Dimension.Columns < 6)
{
// Not enough columns
ModelState.AddModelError("patient", $"Patient worksheet doesn't have enough columns {wk.Dimension.Columns}");
return(new List <string>());
}
if (wk.Name != "Patient Information" ||
((string)wk.Cells[1, 1].Value).Trim() != "Patient First Name" ||
((string)wk.Cells[1, 2].Value).Trim() != "Patient Last name" ||
((string)wk.Cells[1, 3].Value).Trim() != "DOB" ||
((string)wk.Cells[1, 4].Value).Trim() != "MRN" ||
((string)wk.Cells[1, 5].Value).Trim() != "Patient ID (if different than MRN)" ||
((string)wk.Cells[1, 6].Value).Trim() != "Allergies")
{
// Identification
ModelState.AddModelError("patient", "This doesn't appear to be a patient worksheet");
return(new List <string>());
}
// Process data for this sheet
// Skip the headers
for (int i = wk.Dimension.Start.Row + 1;
i <= wk.Dimension.End.Row;
i++)
{
// Skip blank rows
if (wk.Cells[i, 1].Value == null ||
wk.Cells[i, 2].Value == null)
{
continue;
}
var patient = new Patient
{
First = (string)wk.Cells[i, 1].Value,
Last = (string)wk.Cells[i, 2].Value
};
patient.FullName = patient.First + " " + patient.Last;
if (wk.Cells[i, 3].Value != null)
{
if (wk.Cells[i, 3].Value.GetType() == typeof(DateTime))
{
patient.DOB = (DateTime)wk.Cells[i, 3].Value;
}
else if (wk.Cells[i, 3].Value.GetType() == typeof(string))
{
var re = new Regex(@"(\d{1,2})[/-](\d{1,2})");
var m = re.Match((string)wk.Cells[i, 3].Value);
if (m.Success)
{
patient.DOB = new DateTime(1, int.Parse(m.Groups[1].Value), int.Parse(m.Groups[2].Value));
}
else
{
// Invalid date format
ModelState.AddModelError("patient", $"Patient DOB is a string but it is an urecognizable format {(string)wk.Cells[i, 3].Value}");
}
}
else
{
// Invalid type
ModelState.AddModelError("patient", $"Patient DOB is not a string and not DateTime {wk.Cells[i, 3].Value.GetType()}");
}
}
patient.MRN = Convert.ToString(wk.Cells[i, 4].Value);
patient.PatientId = (string)wk.Cells[i, 5].Value;
if (patient.PatientId == null)
{
patient.PatientId = patient.MRN;
}
var allergies = (string)wk.Cells[i, 6].Value;
viewModel.AddPatient(patient, allergies);
}
return(viewModel.Patients);
}
