public SetTissueLocationCommand(IndividualProtein protein, TissueLocation tissueLocation, IExecutionContext context)
{
_protein = protein;
BuildingBlockId = context.BuildingBlockIdContaining(protein);
_newTissuleLocation = tissueLocation;
ObjectType = PKSimConstants.ObjectTypes.Protein;
CommandType = PKSimConstants.Command.CommandTypeEdit;
_proteinId = _protein.Id;
context.UpdateBuildinBlockProperties(this, context.BuildingBlockContaining(protein));
}
public static Localization ConvertToLocalization(TissueLocation tissueLocation, MembraneLocation membraneLocation,
IntracellularVascularEndoLocation vascularEndoLocation)
{
switch (tissueLocation)
{
case TissueLocation.Interstitial:
return(Localization.Interstitial | Localization.BloodCellsIntracellular | Localization.VascMembraneTissueSide);
case TissueLocation.Intracellular:
var vacEndoLocalization = vascularEndoLocation == IntracellularVascularEndoLocation.Endosomal
? Localization.VascEndosome
: Localization.VascMembraneTissueSide;
return(Localization.Intracellular | Localization.BloodCellsIntracellular | vacEndoLocalization);
case TissueLocation.ExtracellularMembrane:
var membLocation = membraneLocation == MembraneLocation.Apical
? Localization.VascMembranePlasmaSide
: Localization.VascMembraneTissueSide;
return(Localization.Interstitial | Localization.BloodCellsMembrane | membLocation);
default:
throw new ArgumentOutOfRangeException(nameof(tissueLocation), tissueLocation, null);
}
}
public void TissueLocationChanged(TissueLocation tissueLocation)
{
AddCommand(_moleculeExpressionTask.SetTissueLocationFor(_protein, tissueLocation));
}
public string IconFor(TissueLocation tissueLocation)
{
return(_representationInfoRepository.InfoFor(RepresentationObjectType.CONTAINER, tissueLocation.ToString()).IconName);
}
public string DisplayFor(TissueLocation tissueLocation)
{
return(_representationInfoRepository.DisplayNameFor(RepresentationObjectType.CONTAINER, tissueLocation.ToString()));
}
public ICommand SetTissueLocationFor(IndividualProtein protein, TissueLocation tissueLocation)
{
return(new SetTissueLocationCommand(protein, tissueLocation, _executionContext).Run(_executionContext));
}
protected override void PerformExecuteWith(IExecutionContext context)
{
OldTissuleLocation = _protein.TissueLocation;
_protein.TissueLocation = _newTissuleLocation;
Description = PKSimConstants.Command.SetProteinTissueLocationDescription(OldTissuleLocation.ToString(), _newTissuleLocation.ToString());
}
