private static void SupportVectorMachineTraining(IEnumerable <MatchingPair> trainingData, IEnumerable <MatchingPair> testData, IDictionary <string, IndexableAttributeMetadata> actualMetadata)
{
var stopWatch = new Stopwatch();
stopWatch.Start();
var trainingInputs = trainingData.Select(data => data.ToVectorArray(actualMetadata)).ToArray();
var trainingOutputs = trainingData.Select(data => data.PercentMatch > 0).ToArray();
var testInputs = testData.Select(data => data.ToVectorArray(actualMetadata)).ToArray();
var testOutputs = testData.Select(data => data.PercentMatch > 0).ToArray();
var learn = new SequentialMinimalOptimization <Gaussian>()
{
UseComplexityHeuristic = true,
UseKernelEstimation = true
};
SupportVectorMachine <Gaussian> svm = learn.Learn(trainingInputs, trainingOutputs);
var inSampleScore = svm.Score(trainingInputs);
var outOfSampleScore = svm.Score(testInputs);
Logger.InfoFormat("Result:\nIn-sample: {0}\nOut-of-sample:{1}", string.Join(", ", inSampleScore), string.Join(", ", outOfSampleScore));
var results = svm.Decide(trainingInputs);
var inSampleErrors = trainingOutputs.Where((t, i) => results[i] != t).Count();
results = svm.Decide(testInputs);
var outOfSampleErrors = testOutputs.Where((t, i) => results[i] != t).Count();
Logger.InfoFormat("Errors: In-sample: {0} Out-of-sample: {1}", inSampleErrors, outOfSampleErrors);
stopWatch.Stop();
Logger.InfoFormat("Regression Tree learning took {0}", stopWatch.Elapsed);
}
public int[] Predict(List <TrainingValue> predictionData)
{
if (!Trained)
{
throw new Exception("Train must be called first!");
}
double[][] featuresArray = new double[predictionData.Count][];
for (int i = 0; i < featuresArray.Length; i++)
{
featuresArray[i] = predictionData[i].Features;
}
switch (type)
{
case ClassifierType.DecisionTree:
return(tree.Decide(featuresArray));
case ClassifierType.LDA:
return(pipeline.Decide(featuresArray));
case ClassifierType.SVM:
return(convertBoolArray(svm.Decide(featuresArray)));
case ClassifierType.Bayes:
return(bayes.Decide(featuresArray));
}
return(null);
}
public double Predict(double[][] observations, int[] labels)
{
bool[] output = machine.Decide(observations);
int[] zeroOneAnswers = output.ToZeroOne();
return(1 - (new AccuracyLoss(labels).Loss(zeroOneAnswers)));
}
private void createSurface(double[,] table)
{
// Get the ranges for each variable (X and Y)
DoubleRange[] ranges = Matrix.GetRange(table, 0);
// Generate a Cartesian coordinate system
double[][] map = Matrix.Mesh(ranges[0], 200, ranges[1], 200);
// Classify each point in the Cartesian coordinate system
double[][] surface = map.InsertColumn(svm.Decide(map));
CreateScatterplot(zedGraphControl2, surface);
}
private void createSurface(double[,] table)
{
// Get the ranges for each variable (X and Y)
DoubleRange[] ranges = table.GetRange(0);
// Generate a Cartesian coordinate system
double[][] map = Matrix.Mesh(ranges[0], 200, ranges[1], 200);
// Classify each point in the Cartesian coordinate system
double[] result = svm.Decide(map).ToMinusOnePlusOne().ToDouble();
double[,] surface = map.ToMatrix().InsertColumn(result);
CreateScatterplot(zedGraphControl2, surface);
}
public void linear_without_threshold_doesnt_solve_xor()
{
double[][] inputs =
{
new double[] { -1, -1 },
new double[] { -1, 1 },
new double[] { 1, -1 },
new double[] { 1, 1 }
};
int[] xor =
{
-1,
1,
1,
-1
};
// Create the sequential minimal optimization teacher
var learn = new SequentialMinimalOptimization()
{
Complexity = 1e-5
};
// Run the learning algorithm
SupportVectorMachine machine = learn.Learn(inputs, xor);
bool[] output = machine.Decide(inputs);
for (int i = 0; i < output.Length; i++)
{
Assert.AreEqual(false, output[i]);
}
}
public double Learn(double[][] observations, int[] labels)
{
var gridsearch = GridSearch <double[], int> .Create(
ranges : new
{
Tolerance = GridSearch.Range(1e-10, 1.0, stepSize: 0.05)
},
learner : (p) => new LinearDualCoordinateDescent
{
Complexity = 1e+10,
Tolerance = p.Tolerance
},
fit : (teacher, x, y, w) => teacher.Learn(x, y, w),
loss : (actual, expected, m) => new ZeroOneLoss(expected).Loss(actual)
);
gridsearch.ParallelOptions.MaxDegreeOfParallelism = 2;
var result = gridsearch.Learn(observations, labels);
machine = result.BestModel;
bool[] output = machine.Decide(observations);
int[] zeroOneAnswers = output.ToZeroOne();
double ratio = 1 - (new AccuracyLoss(labels).Loss(zeroOneAnswers));
return(ratio);
}
public void SequentialMinimalOptimizationConstructorTest()
{
double[][] inputs =
{
new double[] { -1, -1 },
new double[] { -1, 1 },
new double[] { 1, -1 },
new double[] { 1, 1 }
};
int[] or =
{
0,
0,
0,
+1
};
// Create Kernel Support Vector Machine with a Polynomial Kernel of 2nd degree
SupportVectorMachine machine = new SupportVectorMachine(inputs[0].Length);
var learn = new SequentialMinimalOptimization(machine, inputs, or);
learn.Run();
for (int i = 0; i < inputs.Length; i++)
{
bool actual = machine.Decide(inputs[i]);
Assert.AreEqual(or[i] > 0, actual);
}
}
/// <summary>
/// Classify our data using support vector machine classifer and save the model.
/// </summary>
/// <param name="train_data">Frame objects that we will use to train classifers.</param>
/// <param name="test_data">Frame objects that we will use to test classifers.</param>
/// <param name="train_label">Labels of the train data.</param>
/// <param name="test_label">Labels of the test data.</param>
/// <param name="Classifier_Path">Path where we want to save the classifer on the disk.</param>
/// <param name="Classifier_Name">Name of the classifer we wnat to save.</param>
/// <returns></returns>
public void SVM(double[][] train_data, double[][] test_data, int[] train_label, int[] test_label, String Classifier_Path, String Classifier_Name)
{
var learn = new SequentialMinimalOptimization <Gaussian>()
{
UseComplexityHeuristic = true,
UseKernelEstimation = true
};
try
{
SupportVectorMachine <Gaussian> svm = learn.Learn(train_data, train_label);
bool[] prediction = svm.Decide(test_data);
var cm = GeneralConfusionMatrix.Estimate(svm, test_data, test_label);
double error = cm.Error;
Console.WriteLine(error);
svm.Save(Path.Combine(Classifier_Path, Classifier_Name));
}
catch (Exception e)
{ Console.WriteLine(e.StackTrace); }
}
public ConfusionMatrix test(List <pair> test_data, string emotion)
{
if (Boolean.Parse(System.Configuration.ConfigurationManager.AppSettings["rep_results"]) == true)
{
Accord.Math.Random.Generator.Seed = 0;
}
this.Filepath = Path.Combine(trained_location, emotion + "__" + kernel);
SupportVectorMachine <Linear> svm = Serializer.Load <SupportVectorMachine <Linear> >(this.Filepath);
bool[] prediction = svm.Decide(this.test_sample.ToArray());
int[] results = prediction.ToZeroOne();
this.svm_feed_test.Clear();
for (int _counter = 0; _counter < test_data.Count; _counter++)
{
if (test_data[_counter].pair_emot == emotion)
{
this.svm_feed_test.Add(1);
}
else
{
this.svm_feed_test.Add(0);
}
}
return(new ConfusionMatrix(results, this.svm_feed_test.ToArray(), 1, 0));
}
// Compute car control based on sensor readings
void ComputeControl(float sensorL, float sensorF, float sensorR, float carVelocity, float forward)
{
// Inputs
double[][] inputsT = new double[1][];
inputsT[0] = new double[4];
inputsT[0][0] = sensorL;
inputsT[0][1] = sensorF;
inputsT[0][2] = sensorR;
inputsT[0][3] = carVelocity;
double[][] inputs = new double[1][];
inputs[0] = new double[5];
inputs[0][0] = sensorL;
inputs[0][1] = sensorF;
inputs[0][2] = sensorR;
inputs[0][3] = carVelocity;
inputs[0][4] = forward;
answerThrust = treeThrust.Decide(inputsT);
answerSteer = treeSteer.Decide(inputs);
// Thrust
if (answerThrust[0] == true)
{
thrust = pod[1];
//Debug.Log("Acelera!");
}
else if (answerThrust[0] == false)
{
thrust = -pod[2];
//Debug.Log("Freia!");
}
// Steer
if (answerSteer[0] == true)
{
if (sensorLeft > sensorRight)
{
steer = pod[3];
//Debug.Log("Vire a Esquerda!");
}
else
{
steer = -pod[3];
//Debug.Log("Vire a Direita!");
}
}
else if (answerSteer[0] == false)
{
steer = 0;
//Debug.Log("Vai reto!");
}
// Command
rb.AddRelativeForce(new Vector2(0f, thrust));
rb.AddTorque(steer);
}
public bool Predict(string matchId)
{
var inputs = CastListOfBioMeasuresToListOfDoubles(
unitOfWork.Matches.GetBioMeasureForPrediction(matchId));
return(svm.Decide(inputs)
.FirstOrDefault());
}
public void Test(List <Person> testingPeople, int skillSetSize)
{
double[][] inputs = _dataPointService.GenerateDataPointsFromPeople(testingPeople, skillSetSize);
testPredictions = _supportVectorMachine.Decide(inputs);
File.WriteAllLines(
@"C:\Users\Niall\Documents\Visual Studio 2015\Projects\LinkedInSearchUi\LinkedIn Dataset\XML\support_vector_machine_test_predictions.txt" // <<== Put the file name here
, testPredictions.Select(d => d.ToString()).ToArray());
}
private void createSurface(double[,] table)
{
// Get the ranges for each variable (X and Y)
DoubleRange[] ranges = table.GetRange(0);
// Generate a Cartesian coordinate system
double[][] map = Matrix.Cartesian(
Vector.Interval(ranges[0], 0.2),
Vector.Interval(ranges[1], 0.5));
// Classify each point in the Cartesian coordinate system
double[] result = svm.Decide(map).ToMinusOnePlusOne().ToDouble();
double[,] surface = map.ToMatrix().InsertColumn(result);
DataTable trainingData = DataSet.Tables["InterestedTraining"];
CreateSurfaceScatterplot(zedGraphControl2, surface);
}
/// <summary>
/// <inheritdoc />
/// </summary>
public override void Run()
{
var inputs = data.GetSelectedInput(features);
var result = svm.Decide(inputs);
for (int i = 0; i < result.Length; i++)
{
ClassificationOutputs[i] = Convert.ToInt32(result[i]);
}
}
public int[] TestSession(List <string[]> TestData, string emo)
{
double[][] TestD = Embedder(TestData);// W2Vectorizer() can be used as alternative as well
//double[][] TestD = codeB.Transform(TestData.ToArray());
string filename = Path.Combine(".../ZyLAB_Trained", language + "_" + emo + "_EmoKernel.accord");
KernelSVM = Serializer.Load <SupportVectorMachine <Gaussian> >(filename);
bool[] answers = KernelSVM.Decide(TestD);
int[] zeroOneAnswers = answers.ToZeroOne();
return(zeroOneAnswers);
}
public bool isImageEmpty(Bitmap src)
{
bool ret = false;
Bitmap g = Grayscale.CommonAlgorithms.BT709.Apply(src);
ImageStatistics stat = new ImageStatistics(g);
double[][] ds = { new double[] { stat.Gray.Mean, stat.Gray.Median, stat.Gray.StdDev } };
Program.logIt(string.Format("{0},{1},{2}", ds[0][0], ds[0][1], ds[0][2]));
bool[] res = svm.Decide(ds);
ret = !res[0];
return(ret);
}
public static bool[] SVMDecide(SupportVectorMachine <Gaussian> svm, IDataView input)
{
var convertedInput = IDataViewToAccord(input).inputs;
//var lrScore = svm.Score(convertedInput);
//var lrProbability = svm.Probabilities(convertedInput);
//bool[] output = new bool[lrProbability.Length];
//for (int i = 0; i < lrProbability.Length; i++)
//{
// output[i] = lrProbability[i][1] >= threshold;
//}
return(svm.Decide(convertedInput));
}
public bool IsFace(Bitmap image)
{
if (image == null)
{
throw new ArgumentNullException(nameof(image));
}
using (var windowedImageForFeatureExtraction = image.ExtractImageSectionAndResize(new Rectangle(new Point(0, 0), image.Size), new Size(_sampleWidth, _sampleHeight)))
{
return(_svm.Decide(
FeatureExtractor.GetFor(windowedImageForFeatureExtraction, _blockSize, optionalHogPreviewImagePath: null, normaliser: _normaliser).ToArray()
));
}
}
public double Learn(double[][] observations, int[] labels)
{
var learn = new SequentialMinimalOptimization <ChiSquare>()
{
UseKernelEstimation = true
};
machine = learn.Learn(observations, labels);
bool[] output = machine.Decide(observations);
int[] zeroOneAnswers = output.ToZeroOne();
double ratio = 1 - (new AccuracyLoss(labels).Loss(zeroOneAnswers));
return(ratio);
}
public bool classifierSVM(data d)
{
int D = d.d;
double[] input = new double[D];
bool output;
for (int i = 0; i < D; ++i)
{
input[i] = d.msg[i];
}
output = svm.Decide(input);
return(output);
}
public double Learn(double[][] observations, int[] labels)
{
var learn = new SequentialMinimalOptimization <Gaussian>()
{
UseComplexityHeuristic = true,
Kernel = new Gaussian(1.2)
};
machine = learn.Learn(observations, labels);
bool[] output = machine.Decide(observations);
int[] zeroOneAnswers = output.ToZeroOne();
double ratio = 1 - (new AccuracyLoss(labels).Loss(zeroOneAnswers));
return(ratio);
}
public void Train()
{
var inputsOutputs = unitOfWork.Matches.GetBioMeasuresForTraining();
var inputs = CastListOfBioMeasuresToListOfDoubles(inputsOutputs);
var outputs = inputsOutputs
.Select(match => Convert.ToBoolean((int)match.FirstOrDefault().Match.MatchResult))
.ToArray();
var smo = new SequentialMinimalOptimization <Gaussian>()
{
Complexity = 100
};
svm = smo.Learn(inputs, outputs);
bool[] prediction = svm.Decide(inputs);
}
public double Learn(double[][] observations, int[] labels)
{
//var learn = new LinearDualCoordinateDescent()
//{
// Loss = Loss.L2,
// Complexity = 1000,
// Tolerance = 1e-5
//};
SequentialMinimalOptimization learn = new SequentialMinimalOptimization()
{
UseComplexityHeuristic = true,
UseKernelEstimation = false
};
machine = learn.Learn(observations, labels);
bool[] output = machine.Decide(observations);
int[] zeroOneAnswers = output.ToZeroOne();
return(1 - (new AccuracyLoss(labels).Loss(zeroOneAnswers)));
}
private void PredictImages(object sender, RoutedEventArgs e)
{
imageInfo.Text = "Predicting";
if (bow == null)
{
MessageBox.Show("No BoW model!");
return;
}
if (svmIm == null)
{
MessageBox.Show("No SVM model!");
return;
}
Bitmap[] trainIms = new Bitmap[imagesEdited.Count];
ushort z = 0;
foreach (BitmapImage b in imagesEdited)
{
trainIms[z++] = UtilFn.BitmapImage2Bitmap(b);
}
double[][] features = bow.Transform(trainIms);
output = svmIm.Decide(features);
if (output != null)
{
if (output[j] && !cvs.Children.Contains(rectSel2))
{
cvs.Children.Add(rectSel2);
}
else if (!output[j] && cvs.Children.Contains(rectSel2))
{
cvs.Children.Remove(rectSel2);
}
}
imageInfo.Text = "Done";
btnCorrect.IsEnabled = true;
}
public void learn_new_method()
{
#region doc_xor_normal
// As an example, we will try to learn a decision machine
// that can replicate the "exclusive-or" logical function:
double[][] inputs =
{
new double[] { 0, 0 }, // the XOR function takes two booleans
new double[] { 0, 1 }, // and computes their exclusive or: the
new double[] { 1, 0 }, // output is true only if the two booleans
new double[] { 1, 1 } // are different
};
int[] xor = // this is the output of the xor function
{
0, // 0 xor 0 = 0 (inputs are equal)
1, // 0 xor 1 = 1 (inputs are different)
1, // 1 xor 0 = 1 (inputs are different)
0, // 1 xor 1 = 0 (inputs are equal)
};
// Now, we can create the sequential minimal optimization teacher
var learn = new SequentialMinimalOptimization <Gaussian>()
{
UseComplexityHeuristic = true,
UseKernelEstimation = true
};
// And then we can obtain a trained SVM by calling its Learn method
SupportVectorMachine <Gaussian> svm = learn.Learn(inputs, xor);
// Finally, we can obtain the decisions predicted by the machine:
bool[] prediction = svm.Decide(inputs);
#endregion
Assert.AreEqual(prediction, Classes.Decide(xor));
}
public void Train(List <Person> trainingPeople, int skillSetSize)
{
double[][] inputs = _dataPointService.GenerateDataPointsFromPeople(trainingPeople, skillSetSize);
int[] expectedResults = _dataPointService.GenerateExpectedResultFromPeople(trainingPeople);
// Now, we can create the sequential minimal optimization teacher
var learn = new SequentialMinimalOptimization()
{
UseComplexityHeuristic = true,
UseKernelEstimation = false
};
// And then we can obtain a trained SVM by calling its Learn method
_supportVectorMachine = learn.Learn(inputs, expectedResults);
// Finally, we can obtain the decisions predicted by the machine:
trainingPredictions = _supportVectorMachine.Decide(inputs);
File.WriteAllLines(
@"C:\Users\Niall\Documents\Visual Studio 2015\Projects\LinkedInSearchUi\LinkedIn Dataset\XML\predictions.txt" // <<== Put the file name here
, trainingPredictions.Select(d => d.ToString()).ToArray());
}
/// <summary>
/// Tests the previously created machine into a new set of data.
/// </summary>
///
private void btnTestingRun_Click(object sender, EventArgs e)
{
if (svm == null || dgvTestingSource.DataSource == null)
{
MessageBox.Show("Please create a machine first.");
return;
}
// Creates a matrix from the source data table
double[,] table = (dgvTestingSource.DataSource as DataTable).ToMatrix();
// Extract the first and second columns (X and Y)
double[][] inputs = table.GetColumns(0, 1, 2, 3, 4, 5).ToJagged();
// Extract the expected output labels
bool[] expected = Classes.Decide(table.GetColumn(6));
// Compute the actual machine outputs
bool[] output = svm.Decide(inputs);
// Use confusion matrix to compute some performance metrics
dgvPerformance.DataSource = new [] { new ConfusionMatrix(output, expected) };
// Create performance scatter plot
CreateResultScatterplot(zedGraphControl1, inputs,
expected.ToMinusOnePlusOne().ToDouble(),
output.ToMinusOnePlusOne().ToDouble());
}
public void LeastSquaresConstructorTest()
{
double[][] inputs =
{
new double[] { -1, -1 },
new double[] { -1, 1 },
new double[] { 1, -1 },
new double[] { 1, 1 }
};
int[] or =
{
0,
0,
0,
+1
};
// Create Kernel Support Vector Machine with a Polynomial Kernel of 2nd degree
var machine = new SupportVectorMachine(inputs[0].Length);
var learn = new LeastSquaresLearning(machine, inputs, or);
double error = learn.Run();
Assert.AreEqual(0, error);
{
int[] iout = new int[inputs.Length];
machine.ToMulticlass().Decide(inputs, iout);
for (int i = 0; i < iout.Length; i++)
{
Assert.AreEqual(or[i], iout[i]);
}
}
{
double[] dout = new double[inputs.Length];
machine.ToMulticlass().Decide(inputs, dout);
for (int i = 0; i < dout.Length; i++)
{
Assert.AreEqual(or[i], dout[i]);
}
}
{
bool[] bout = new bool[inputs.Length];
machine.Decide(inputs, bout);
Assert.IsFalse(bout[0]);
Assert.IsFalse(bout[1]);
Assert.IsFalse(bout[2]);
Assert.IsTrue(bout[3]);
}
{
int[][] iiout = Jagged.Create <int>(inputs.Length, 2);
machine.ToMulticlass().Decide(inputs, iiout);
for (int i = 0; i < iiout.Length; i++)
{
Assert.AreEqual(or[i], iiout[i][0]);
Assert.AreEqual(or[i], iiout[i][1] == 1 ? 0 : 1);
}
}
{
bool[][] bbout = Jagged.Create <bool>(inputs.Length, 2);
machine.ToMulticlass().Decide(inputs, bbout);
for (int i = 0; i < bbout.Length; i++)
{
Assert.AreEqual(or[i], bbout[i][0] ? 1 : 0);
Assert.AreEqual(or[i], bbout[i][1] ? 0 : 1);
}
}
}
public void learn_linear()
{
#region doc_xor_linear
// As an example, we will try to learn a linear machine that can
// replicate the "exclusive-or" logical function. However, since we
// will be using a linear SVM, we will not be able to solve this
// problem perfectly as the XOR is a non-linear classification problem:
double[][] inputs =
{
new double[] { 0, 0 }, // the XOR function takes two booleans
new double[] { 0, 1 }, // and computes their exclusive or: the
new double[] { 1, 0 }, // output is true only if the two booleans
new double[] { 1, 1 } // are different
};
int[] xor = // this is the output of the xor function
{
0, // 0 xor 0 = 0 (inputs are equal)
1, // 0 xor 1 = 1 (inputs are different)
1, // 1 xor 0 = 1 (inputs are different)
0, // 1 xor 1 = 0 (inputs are equal)
};
// Now, we can create the sequential minimal optimization teacher
var learn = new SequentialMinimalOptimization()
{
UseComplexityHeuristic = true,
UseKernelEstimation = false
};
// And then we can obtain a trained SVM by calling its Learn method
SupportVectorMachine svm = learn.Learn(inputs, xor);
// Finally, we can obtain the decisions predicted by the machine:
bool[] prediction = svm.Decide(inputs);
#endregion
Assert.AreEqual(prediction[0], false);
Assert.AreEqual(prediction[1], false);
Assert.AreEqual(prediction[2], false);
Assert.AreEqual(prediction[3], false);
int[] or = // this is the output of the xor function
{
0, // 0 or 0 = 0 (inputs are equal)
1, // 0 or 1 = 1 (inputs are different)
1, // 1 or 0 = 1 (inputs are different)
1, // 1 or 1 = 1 (inputs are equal)
};
learn = new SequentialMinimalOptimization()
{
Complexity = 1e+8,
UseKernelEstimation = false
};
svm = learn.Learn(inputs, or);
prediction = svm.Decide(inputs);
Assert.AreEqual(prediction[0], false);
Assert.AreEqual(prediction[1], true);
Assert.AreEqual(prediction[2], true);
Assert.AreEqual(prediction[3], true);
}