private void MakeED() { //Fill Rho array try { RhoCalc.IsOneSigma = Holdsigma.Checked; RhoCalc.ZOffset = Zoffset.ToDouble(); RhoCalc.GetSubRoughness = SubRough.ToDouble(); RhoCalc.BoxCount = BoxCount.ToInt(); RhoCalc.SubphaseSLD = SubphaseSLD.ToDouble(); RhoCalc.SuperphaseSLD = SupSLDTB.ToDouble(); //Blank our Rho data from the previous iteration RhoCalc.RhoArray.Clear(); RhoCalc.LengthArray.Clear(); RhoCalc.SigmaArray.Clear(); BoxRhoArray.ForEach(p => RhoCalc.RhoArray.Add(p.ToDouble())); BoxLengthArray.ForEach(p => RhoCalc.LengthArray.Add(p.ToDouble())); BoxSigmaArray.ForEach(p => RhoCalc.SigmaArray.Add(p.ToDouble())); if (Holdsigma.Checked) { ChangeRoughnessArray(); } GreyFields(); RhoCalc.UpdateProfile(); } catch (Exception ex) { MessageBox.Show(ex.Message.ToString()); } }
//Update our variables after validation private void Variable_Changed(object sender, EventArgs e) { try { if (m_isupdating == false) { RhoGraphing.SupSLD = ReflGraphing.SupSLD = SupSLDTB.ToDouble(); RhoGraphing.SubSLD = ReflGraphing.SubSLD = SubphaseSLD.ToDouble(); ReflGraphing.SetGraphType(Properties.Settings.Default.ForceRQ4, DBFCB.Checked); ReflGraphing.SetGraphType(Properties.Settings.Default.ForceRQ4, DBFCB.Checked); MakeReflectivity(); } } catch { } }
private void MakeReflectivity() { //Fill Rho array try { ReflCalc.IsOneSigma = Holdsigma.Checked; ReflCalc.ZOffset = 25; ReflCalc.GetSubRoughness = SubRough.ToDouble(); ReflCalc.BoxCount = BoxCount.ToInt(); ReflCalc.SubphaseSLD = SubphaseSLD.ToDouble(); ReflCalc.SuperphaseSLD = SupSLDTB.ToDouble(); ReflCalc.HighQOffset = Rightoffset.ToInt(); ReflCalc.LowQOffset = CritOffset.ToInt(); ReflCalc.NormalizationFactor = NormCorrectTB.ToDouble(); ReflCalc.ImpNormCB = ImpNormCB.Checked; ReflCalc.QSpreadTB = QSpreadTB.ToDouble(); //Blank our Rho data from the previous iteration ReflCalc.RhoArray.Clear(); ReflCalc.LengthArray.Clear(); ReflCalc.SigmaArray.Clear(); RhoArray.ForEach(p => ReflCalc.RhoArray.Add(p.ToDouble())); LengthArray.ForEach(p => ReflCalc.LengthArray.Add(p.ToDouble())); SigmaArray.ForEach(p => ReflCalc.SigmaArray.Add(p.ToDouble())); if (Holdsigma.Checked) { ChangeRoughnessArray(); } ReflCalc.UpdateProfile(); } catch (Exception ex) { MessageBox.Show(ex.Message.ToString()); } }
private void FillSettingsStruct(ref ModelSettings settings) { settings.Title = TitleTB.Text; settings.CritEdgeOffset = int.Parse(critedgeoffTB.Text); settings.HighQOffset = int.Parse(HQoffsetTB.Text); settings.SurflayerSLD = Rholipid.ToDouble(); settings.SubSLD = SubSLDTB.ToDouble(); settings.SupSLD = SupSLDTB.ToDouble(); settings.Boxes = Boxlayers.ToInt(); settings.Surflayerlength = layerlength.ToDouble(); settings.SurflayerAbs = SurfAbs.ToDouble(); settings.Wavelength = wavelength.ToDouble(); settings.SubAbs = SubAbs.ToDouble(); settings.SupAbs = SupAbsTB.ToDouble(); settings.UseAbs = UseAbsCB.Checked; settings.SupOffset = Double.Parse(SupoffsetTB.Text); settings.Percerror = Double.Parse(QErrTB.Text); settings.Forcenorm = ForceNormCB.Checked; settings.Forcesig = Double.Parse(SigTSTB.Text); if (double.Parse(SigTSTB.Text) == 0) { settings.SigmaSearchPerc = int.Parse(SigmaSearchTB.Text); } else { settings.SigmaSearchPerc = 0; } settings.Debug = debugToolStripMenuItem.Checked; settings.ForceXR = forceXRToolStripMenuItem1.Checked; settings.Resolution = int.Parse(ResolutionTB.Text); settings.Totallength = Double.Parse(TotlengthTB.Text); settings.ImpNorm = ImpNormCB.Checked; settings.FitFunc = objectiveCB.SelectedIndex; settings.ParamTemp = Double.Parse(ParamTempTB.Text); if (UseAbsCB.Checked) { settings.AbsorptionSearchPerc = int.Parse(AbsorptionSearchTB.Text); } else { settings.AbsorptionSearchPerc = 0; } if (ImpNormCB.Checked) { settings.NormalizationSearchPerc = int.Parse(NormSearchTB.Text); } else { settings.NormalizationSearchPerc = 0; } settings.Algorithm = AlgorithmCB.SelectedIndex; settings.AnnealInitTemp = m_dAnnealtemp; settings.AnnealTempPlat = m_iAnnealplat; settings.AnnealSlope = m_dAnnealslope; settings.AnnealGamma = m_dSTUNGamma; settings.STUNfunc = m_iSTUNfunc; settings.STUNAdaptive = m_bSTUNAdaptive; settings.STUNtempiter = m_iSTUNtempiter; settings.STUNdeciter = m_iSTUNdeciter; settings.STUNgammadec = m_dSTUNgammadec; }
private void LoadDataFile(string origreflfilename) { try { if (!ReflData.Instance.SetReflData(origreflfilename, !errorsAreInVarianceToolStripMenuItem.Checked)) { throw new Exception("Could not load file"); } FileNameTB.Text = origreflfilename; settingsfile = origreflfilename + "settings.xml"; reflgraphobject.SetAllFonts("Garamond", 20, 18); reflgraphobject.SubSLD = SubSLDTB.ToDouble(); reflgraphobject.SupSLD = SupSLDTB.ToDouble(); reflgraphobject.GetHighQOffset = ReflData.Instance.GetNumberDataPoints; reflgraphobject.GetLowQOffset = 0; reflgraphobject.SetGraphType(forceRQ4GraphingToolStripMenuItem.Checked, fresnelcb.Checked); //Load the modeled files if they are available if (File.Exists(settingsfile) && !m_bloadfromcommandline) { if (MessageBox.Show("Do you want to load the previous run?", "Resume?", MessageBoxButtons.YesNo) == DialogResult.Yes) { rhographobject.Clear(); reflgraphobject.Clear(); if (!LoadSettings()) { return; } string tempfile = ReflData.Instance.GetWorkingDirectory + "\\rho.dat"; if (File.Exists(tempfile)) { LoadZ(tempfile); rhographobject.SubSLD = double.Parse(SubSLDTB.Text); rhographobject.UseSLD = UseSLDToolStripMenuItem.Checked; if (UseSLDToolStripMenuItem.Checked) { rhographobject.SetAxisTitles("Z", "SLD"); rhographobject.Title = "Model Independent SLD Fit"; } else { rhographobject.SetAxisTitles("Z", "Normalized Electron Density"); rhographobject.Title = "Model Independent Electron Density Fit"; } rhographobject.LoadFiletoGraph(tempfile.ToString(), rhomodelname, "Model Independent Electron Density Fit", Color.Tomato, SymbolType.None, 0, true); } tempfile = ReflData.Instance.GetWorkingDirectory + "\\rf.dat"; if (File.Exists(tempfile)) { reflgraphobject.SubSLD = double.Parse(SubSLDTB.Text); reflgraphobject.SupSLD = double.Parse(SupSLDTB.Text); reflgraphobject.SetGraphType(forceRQ4GraphingToolStripMenuItem.Checked, fresnelcb.Checked); reflgraphobject.GetLowQOffset = int.Parse(critedgeoffTB.Text); reflgraphobject.GetHighQOffset = ReflData.Instance.GetNumberDataPoints - int.Parse(HQoffsetTB.Text); //Load the data file to the graph reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData); reflgraphobject.LoadFiletoGraph(tempfile.ToString(), modelreflname, "Model Independent Reflectivity", Color.Tomato, SymbolType.Square, 2, true); } GraphCollection.Instance.MainReflGraph = reflgraphobject; GraphCollection.Instance.MainRhoGraph = rhographobject; UpdateReportParameters(); } else { //Clear the report ReportGenerator.Instance.ClearAll(); //Load the data file to the graph reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData); FileInfo info = new FileInfo(settingsfile); if (File.Exists(info.DirectoryName + "\\pop.dat")) { //Create a backup folder if we don't have one if (!System.IO.Directory.Exists(info.DirectoryName + "\\FitBackUp")) { System.IO.Directory.CreateDirectory(info.DirectoryName + "\\FitBackUp"); } int index = 0; for (; ;) { if (!System.IO.Directory.Exists(info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString())) { System.IO.Directory.CreateDirectory(info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString()); break; } index++; } string fileloc = info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString(); File.Move(info.DirectoryName + "\\pop.dat", fileloc + "\\pop.dat"); File.Move(settingsfile, fileloc + "\\" + info.Name); if (File.Exists(info.DirectoryName + "\\rf.dat")) { File.Move(info.DirectoryName + "\\rf.dat", fileloc + "\\rf.dat"); } if (File.Exists(info.DirectoryName + "\\rho.dat")) { File.Move(info.DirectoryName + "\\rho.dat", fileloc + "\\rho.dat"); } if (File.Exists(info.DirectoryName + "\\reflfile.dat")) { File.Move(info.DirectoryName + "\\reflfile.dat", fileloc + "\\reflfile.dat"); } if (File.Exists(info.DirectoryName + "\\reflrhofit.dat")) { File.Move(info.DirectoryName + "\\reflrhofit.dat", fileloc + "\\reflrhofit.dat"); } } } } else { //Load the data file to the graph reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData); } DisableInterface(false); Cancelbutton.Enabled = false; reflgraphobject.SetBounds(); SubAbs.Enabled = SupAbsTB.Enabled = SurfAbs.Enabled = UseAbsCB.Checked; } catch (Exception ex) { origreflfilename = string.Empty; FileNameTB.Clear(); DisableInterface(true); MessageBox.Show(ex.Message); } }
public ConstrainedReflmodeling(RhoFit RhoCalc) { InitializeComponent(); ReflCalc = new ReflFit(RhoCalc as BoxReflFitBase); m_bUseSLD = Properties.Settings.Default.UseSLDSingleSession; SigmaArray = new List <TextBox>(6); LengthArray = new List <TextBox>(6); RhoArray = new List <TextBox>(6); HoldSigmaArray = new List <CheckBox>(6); HoldLengthArray = new List <CheckBox>(6); HoldRhoArray = new List <CheckBox>(6); if (m_bUseSLD) { tabControl1.TabPages[1].Text = "SLD"; RhoLabel.Text = "SLD"; } else { tabControl1.TabPages[1].Text = "Electron Density"; } WavelengthTB.Text = ((double)(1.24)).ToString(); //Initialize the arrays MakeArrays(); //Copy over the values BoxCount.Text = RhoCalc.BoxCount.ToString(); SubRough.Text = RhoCalc.GetSubRoughness.ToString(); SubphaseSLD.Text = RhoCalc.SubphaseSLD.ToString(); SupSLDTB.Text = RhoCalc.SuperphaseSLD.ToString(); Holdsigma.Checked = RhoCalc.IsOneSigma; //Setup the Graph ReflGraphing = new Graphing(string.Empty); ReflGraphing.SetGraphType(Properties.Settings.Default.ForceRQ4, DBFCB.Checked); ReflGraphing.SubSLD = SubphaseSLD.ToDouble(); ReflGraphing.SupSLD = SupSLDTB.ToDouble(); ReflGraphing.CreateGraph(RhoGraph, "Reflectivity", "Q/Qc", "Intensity / Fresnel", AxisType.Log); ReflGraphing.LoadDatawithErrorstoGraph("Reflectivity Data", System.Drawing.Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData); //Set up ED Graph RhoGraphing = new Graphing(string.Empty); RhoGraphing.SubSLD = SubphaseSLD.ToDouble(); RhoGraphing.UseSLD = m_bUseSLD; RhoGraphing.SetGraphType(false, false); if (m_bUseSLD == false) { RhoGraphing.CreateGraph(EDzedGraphControl1, "Electron Density Profile", "Z", "Normalized Electron Density", AxisType.Linear); } else { RhoGraphing.CreateGraph(EDzedGraphControl1, "SLD Profile", "Z", "SLD", AxisType.Linear); } RhoGraphing.Pane.XAxis.Scale.Min = 0; RhoGraphing.Pane.XAxis.Scale.Max = ReflCalc.Z[ReflCalc.Z.Length - 1]; loadingCircle2.Visible = loadingCircle1.Visible = false; loadingCircle2.NumberSpoke = loadingCircle1.NumberSpoke = 25; loadingCircle2.InnerCircleRadius = loadingCircle1.InnerCircleRadius = 60; loadingCircle2.OuterCircleRadius = loadingCircle1.OuterCircleRadius = 120; loadingCircle2.RotationSpeed = loadingCircle1.RotationSpeed = 150; loadingCircle2.SpokeThickness = loadingCircle1.SpokeThickness = 3; //Initialize constrain form ConstrForm = new Constraints(6); GreyFields(); //Setup the callback if the graph updates the bounds ReflGraphing.ChangedBounds += new Graphing.ChangedEventHandler(PointChanged); //Setup the callback to update the frontend with new information ReflCalc.Update += new BoxReflFitBase.UpdateProfileHandler(ReflCalc_Update); ReflCalc_Update(null, null); MakeReflectivity(); }