public void validate_write_text_files_from_file_in_resources()
{
var testDictionary = SpectralDatabase.GetDefaultDatabaseFromFileInResources();
SpectralDatabase.WriteDatabaseToFiles(testDictionary);
Assert.IsTrue(FileIO.FileExists("absorber-Fat.txt"));
Assert.IsTrue(FileIO.FileExists("absorber-H2O.txt"));
Assert.IsTrue(FileIO.FileExists("absorber-Hb.txt"));
Assert.IsTrue(FileIO.FileExists("absorber-HbO2.txt"));
Assert.IsTrue(FileIO.FileExists("absorber-Melanin.txt"));
Assert.IsTrue(FileIO.FileExists("absorber-Nigrosin.txt"));
}
static void Main(string[] args)
{
var skipImport = false;
string[] filenames = null;
string path = null;
string outname = null;
string outpath = null;
args.Process(() =>
{
logger.Info("\nSpectral Data Import\n");
logger.Info("For more information type import.exe help");
logger.Info("For help on a specific topic type import.exe help=<topicname>\n");
},
new CommandLine.Switch("help", val =>
{
var helpTopic = val.FirstOrDefault();
ShowHelp(helpTopic);
skipImport = true;
}),
new CommandLine.Switch("@/help", val =>
{
var helpTopic = val.FirstOrDefault();
ShowHelp(helpTopic);
skipImport = true;
}),
new CommandLine.Switch("generatefiles", val =>
{
logger.Info(() => "Generating spectral data files...");
try
{
var testDictionary = Vts.SpectralMapping.SpectralDatabase.GetDefaultDatabaseFromFileInResources();
SpectralDatabase.WriteDatabaseToFiles(testDictionary);
}
catch (Exception e)
{
logger.Info("**** An error occurred while generating the import files ****");
logger.Info("Detailed error: " + e.Message);
}
skipImport = true;
}),
new CommandLine.Switch("filename", val =>
{
filenames = new[] { val.FirstOrDefault() };
logger.Info(() => "import files specified as: " + filenames[0]);
}),
new CommandLine.Switch("filenames", val =>
{
filenames = val.ToArray();
var message = "import files specified as: ";
if (filenames.Length > 0)
{
message = message + filenames.First();
for (int i = 1; i < filenames.Count(); i++)
{
message = message + ", " + filenames[i];
}
}
logger.Info(() => message);
}),
new CommandLine.Switch("path", val =>
{
path = val.FirstOrDefault();
logger.Info(() => "import path specified as " + path);
}),
new CommandLine.Switch("outname", val =>
{
outname = val.FirstOrDefault();
logger.Info(() => "outname specified as " + outname);
}),
new CommandLine.Switch("outpath", val =>
{
outpath = val.FirstOrDefault();
logger.Info(() => "outpath specified as " + outpath);
}));
if (skipImport)
{
return;
}
var chromophoreDictionary = SpectralImporter.ImportSpectraFromFile(filenames, path);
chromophoreDictionary.WriteToJson(Path.Combine(outpath ?? "", outname ?? "SpectralDictionary.txt"));
}