private void ProcessSnapshot(short snap) { DebugOut.PrintLine("PROCESSING SNAPSHOT WITHOUT ARRAYS " + snap); // using this only if needed List <SnapFileSummary> results = new List <SnapFileSummary>(); // and make the directory, just to be safe try { //Directory.CreateDirectory(GetSnapDir(outPath, snap)); Directory.CreateDirectory(outPath); } //SUMMARY TODO catch (IOException e) { System.Console.WriteLine(e.Message); } int curFile = firstSnapshotFile; // index of current read/write file int numFile = 0; if (lastSnapshotFile < firstSnapshotFile) { lastSnapshotFile = firstSnapshotFile; numFile = -1; } while (curFile <= lastSnapshotFile) { //DebugOut.PrintLine("..file " + curFile + "/" + lastSnapshotFile); Console.WriteLine("..file " + curFile + "/" + lastSnapshotFile); SnapFileSummary currentFileSummary = new SnapFileSummary(); results.Add(currentFileSummary); currentFileSummary.start = DateTime.Now; string filename = ""; try { filename = GetSnapFile(inPath, snap, snapshotFilePrefix, curFile); currentFileSummary.inFileName = filename; } catch (Exception e) { Console.WriteLine(e.Message); currentFileSummary.badStatus = true; currentFileSummary.statusMessage = e.Message; return; } // now load the file SnapFile curSnap = new SnapFile(filename); // and open the stream for writing using (BinaryWriter binwriter = new BinaryWriter(new FileStream(GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile), FileMode.Create))) { currentFileSummary.outFileName = GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile); Structs[] parts = new Structs[curSnap.numSample]; // now write each particle into the array for (int i = 0; i < curSnap.numSample; i++) { parts[i].x = curSnap.pos[i, 0]; parts[i].y = curSnap.pos[i, 1]; parts[i].z = curSnap.pos[i, 2]; parts[i].vx = curSnap.vel[i, 0]; parts[i].vy = curSnap.vel[i, 1]; parts[i].vz = curSnap.vel[i, 2]; parts[i].snapnum = snap; parts[i].id = curSnap.id[i]; // add in highest-order bit parts[i].id |= ((UInt64)curSnap.nLargeSims[1]) << 32; // make ph-key parts[i].phkey = GetPHKey(parts[i].x, parts[i].y, parts[i].z); // read hsml, if desired } // now sort before writing files Array.Sort <Structs>(parts, new ParticleComparator()); // and then write output for (int i = 0; i < curSnap.numSample; i++) { parts[i].WriteBinaryNoHsml(binwriter); } // and add a bulk insert //TODO sql commands file DebugOut.AddCommand(GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile), snapshotTable); DebugOut.PrintLine("..wrote " + curSnap.numSample + "/" + curSnap.numTotals[1] + " points"); } // and set numFiles if (numFile == -1) { numFile = (int)curSnap.numSubfiles - firstSnapshotFile + 1; lastSnapshotFile = numFile - 1; } currentFileSummary.end = DateTime.Now; currentFileSummary.duration = results[curFile].start - results[curFile].end; currentFileSummary.numParticles = curSnap.numSample; curFile++; // avoid outofmemory errors GC.Collect(); GC.WaitForPendingFinalizers(); } globals.summary.setFileSummaries(results); }
private void ProcessSnapshotWithArrays(short snap) { //DebugOut.PrintLine("PROCESSING SNAPSHOT WITH ARRAYS" + snap); // using this only if needed List <SnapFileSummary> results = new List <SnapFileSummary>(); //and make the directory, just to be safe try { Directory.CreateDirectory(outPath); } catch (IOException e) { globals.summary.addError(e.Message); return; } int curFile = firstSnapshotFile; // index of current read/write file int numFile = 0; if (lastSnapshotFile < firstSnapshotFile) { lastSnapshotFile = firstSnapshotFile; numFile = -1; } while (curFile <= lastSnapshotFile) { //DebugOut.PrintLine("..file " + curFile + "/" + lastSnapshotFile); Console.WriteLine("..file " + curFile + "/" + lastSnapshotFile); SnapFileSummary currentFileSummary = new SnapFileSummary(); results.Add(currentFileSummary); currentFileSummary.start = DateTime.Now; currentFileSummary.fileNumber = curFile; string filename = ""; try { filename = GetSnapFile(inPath, snap, snapshotFilePrefix, curFile); currentFileSummary.inFileName = filename; } catch (Exception e) { currentFileSummary.badStatus = true; currentFileSummary.statusMessage = e.Message; globals.summary.setFileSummaries(results); return; } // now load the file try { SnapFile curSnap = new SnapFile(filename); // and open the stream for writing using (SqlBinaryWriter binwriter = new SqlBinaryWriter(new FileStream(GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile), FileMode.Create))) { Structs[] parts = new Structs[curSnap.numSample]; //record destination path in file summary currentFileSummary.outFileName = GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile); // now write each particle into the array for (int i = 0; i < curSnap.numSample; i++) { parts[i].x = curSnap.pos[i, 0]; parts[i].y = curSnap.pos[i, 1]; parts[i].z = curSnap.pos[i, 2]; parts[i].vx = curSnap.vel[i, 0]; parts[i].vy = curSnap.vel[i, 1]; parts[i].vz = curSnap.vel[i, 2]; parts[i].snapnum = snap; parts[i].id = curSnap.id[i]; // add in highest-order bit parts[i].id |= ((UInt64)curSnap.nLargeSims[1]) << 32; // make ph-key parts[i].phkey = GetPHKey(parts[i].x, parts[i].y, parts[i].z); } // now sort before writing files // TODO //TBD this may not be necessary if the particles // are sorted in the files already. Array.Sort <Structs>(parts, new ParticleComparator()); Cell cell = new Cell(snap); int currentPHkey = -1; for (int i = 0; i < curSnap.numSample; i++) { if (parts[i].phkey != currentPHkey) { if (cell.Count > 0) { binwriter.WriteCell(cell); } currentPHkey = parts[i].phkey; cell.Init(currentPHkey); } cell.AddToCell(parts[i]); } if (cell.Count > 0) { binwriter.WriteCell(cell); } // and add a bulk insert //DebugOut.AddCommand(GetSnapDefault(outPath, snap, snapshotFilePrefix, curFile), snapshotTable); Console.WriteLine("..wrote " + curSnap.numSample + "/" + curSnap.numTotals[1] + " points"); DebugOut.PrintLine("..wrote " + curSnap.numSample + "/" + curSnap.numTotals[1] + " points"); } // and set numFiles if (numFile == -1) { numFile = (int)curSnap.numSubfiles - firstSnapshotFile; lastSnapshotFile = (int)curSnap.numSubfiles - 1; } currentFileSummary.end = DateTime.Now; currentFileSummary.duration = results[curFile].end - results[curFile].start; currentFileSummary.numParticles = curSnap.numSample; if (curSnap.numSample < (int)(0.01 * LoaderConstants.particlesPerSnap)) { currentFileSummary.warning = true; currentFileSummary.warningMessage = "Less than 1% of particles in snapshot in this file"; } if (curSnap.numSample > LoaderConstants.particlesPerSnap) { currentFileSummary.warning = true; currentFileSummary.warningMessage = "More particles in file than are supposed to be in snapshot"; } if (currentFileSummary.outFileName != null) { globals.summary.AddSnapBCPCommand(currentFileSummary.outFileName); } curFile++; // avoid outofmemory errors GC.Collect(); GC.WaitForPendingFinalizers(); } catch (Exception e) { currentFileSummary.badStatus = true; currentFileSummary.statusMessage = e.Message; globals.summary.setFileSummaries(results); return; } } globals.summary.setFileSummaries(results); }