/// <summary>
/// Remove a Protein-Spectrum-Match identification from the tree.
/// </summary>
/// <param name="id">Protein-Spectrum-Match to remove.</param>
public void Remove(PrSm id)
{
if (Proteins.ContainsKey(id.ProteinName))
{
Proteins[id.ProteinName].Remove(id);
}
}
/// <summary>
/// Get a protein associated with a certain ID.
/// </summary>
/// <param name="id">ID to search for.</param>
/// <returns>The protein ID found.</returns>
public ProteinId GetProtein(PrSm id)
{
ProteinId protein = null;
if (Proteins.ContainsKey(id.ProteinName))
{
protein = Proteins[id.ProteinName];
}
return(protein);
}
/// <summary>
/// Add a Protein-Spectrum-Match identification.
/// </summary>
/// <param name="id">Protein-Spectrum-Math to add</param>
public void Add(PrSm id)
{
RemoveUnidentifiedScan(id);
if (!allProteins.ContainsKey(id.ProteinName))
{
return;
////this.allProteins.Add(id.ProteinName, new ProteinId(id.Sequence, id.ProteinName));
}
if (!Proteins.ContainsKey(id.ProteinName))
{
Proteins.Add(id.ProteinName, allProteins[id.ProteinName]);
}
var protein = Proteins[id.ProteinName];
protein.Add(id);
}
