public void TestLearnerConstrainingByName()
{
string pathData = GetDataPath("adult.train");
int numOfSampleRows = 1000;
int batchSize = 1;
int numIterations = 1;
int numTransformLevels = 2;
var retainedLearnerNames = new[] { $"LogisticRegressionBinaryClassifier", $"FastTreeBinaryClassifier" };
using (var env = new LocalEnvironment()
.AddStandardComponents()) // AutoInference uses ComponentCatalog to find all learners
{
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.Auc);
// Using the simple, uniform random sampling (with replacement) brain.
PipelineOptimizerBase autoMlBrain = new UniformRandomEngine(env);
// Run initial experiment.
var amls = AutoInference.InferPipelines(env, autoMlBrain, pathData, "", out var _,
numTransformLevels, batchSize, metric, out var _, numOfSampleRows,
new IterationTerminator(numIterations), MacroUtils.TrainerKinds.SignatureBinaryClassifierTrainer);
// Keep only logistic regression and FastTree.
amls.KeepSelectedLearners(retainedLearnerNames);
var space = amls.GetSearchSpace();
// Make sure only learners left are those retained.
Assert.Equal(retainedLearnerNames.Length, space.Item2.Length);
Assert.True(space.Item2.All(l => retainedLearnerNames.Any(r => r == l.LearnerName)));
}
}
public void TestRegressionPipelineWithMinimizingMetric()
{
string pathData = GetDataPath("../Housing (regression)/housing.txt");
int numOfSampleRows = 100;
int batchSize = 5;
int numIterations = 10;
int numTransformLevels = 1;
using (var env = new LocalEnvironment()
.AddStandardComponents()) // AutoInference uses ComponentCatalog to find all learners
{
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.AccuracyMicro);
// Using the simple, uniform random sampling (with replacement) brain
PipelineOptimizerBase autoMlBrain = new UniformRandomEngine(env);
// Run initial experiments
var amls = AutoInference.InferPipelines(env, autoMlBrain, pathData, "", out var _, numTransformLevels, batchSize,
metric, out var bestPipeline, numOfSampleRows, new IterationTerminator(numIterations),
MacroUtils.TrainerKinds.SignatureRegressorTrainer);
// Allow for one more iteration
amls.UpdateTerminator(new IterationTerminator(numIterations + 1));
// Do learning. Only retained learner should be left in all pipelines.
bestPipeline = amls.InferPipelines(numTransformLevels, batchSize, numOfSampleRows);
// Make sure hyperparameter value did not change
Assert.NotNull(bestPipeline);
Assert.True(amls.GetAllEvaluatedPipelines().All(
p => p.PerformanceSummary.MetricValue >= bestPipeline.PerformanceSummary.MetricValue));
}
}
public void PipelineSweeperNoTransforms()
{
// Set up inputs for experiment
string pathData = GetDataPath("adult.train");
string pathDataTest = GetDataPath("adult.test");
const int numOfSampleRows = 1000;
const string schema = "sep=, col=Features:R4:0,2,4,10-12 col=Label:R4:14 header=+";
var inputFileTrain = new SimpleFileHandle(Env, pathData, false, false);
#pragma warning disable 0618
var datasetTrain = ImportTextData.ImportText(Env,
new ImportTextData.Input {
InputFile = inputFileTrain, CustomSchema = schema
}).Data.Take(numOfSampleRows);
var inputFileTest = new SimpleFileHandle(Env, pathDataTest, false, false);
var datasetTest = ImportTextData.ImportText(Env,
new ImportTextData.Input {
InputFile = inputFileTest, CustomSchema = schema
}).Data.Take(numOfSampleRows);
#pragma warning restore 0618
const int batchSize = 5;
const int numIterations = 20;
const int numTransformLevels = 2;
var env = new MLContext();
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.Auc);
// Using the simple, uniform random sampling (with replacement) engine
PipelineOptimizerBase autoMlEngine = new UniformRandomEngine(Env);
// Create search object
var amls = new AutoInference.AutoMlMlState(Env, metric, autoMlEngine, new IterationTerminator(numIterations),
MacroUtils.TrainerKinds.SignatureBinaryClassifierTrainer, datasetTrain, datasetTest);
// Infer search space
amls.InferSearchSpace(numTransformLevels);
// Create macro object
var pipelineSweepInput = new Microsoft.ML.Legacy.Models.PipelineSweeper()
{
BatchSize = batchSize,
};
var exp = new Experiment(Env);
var output = exp.Add(pipelineSweepInput);
exp.Compile();
exp.SetInput(pipelineSweepInput.TrainingData, datasetTrain);
exp.SetInput(pipelineSweepInput.TestingData, datasetTest);
exp.SetInput(pipelineSweepInput.State, amls);
exp.SetInput(pipelineSweepInput.CandidateOutputs, new IDataView[0]);
exp.Run();
// Make sure you get back an AutoMlState, and that it ran for correct number of iterations
// with at least minimal performance values (i.e., best should have AUC better than 0.1 on this dataset).
AutoInference.AutoMlMlState amlsOut = (AutoInference.AutoMlMlState)exp.GetOutput(output.State);
Assert.NotNull(amlsOut);
Assert.Equal(amlsOut.GetAllEvaluatedPipelines().Length, numIterations);
Assert.True(amlsOut.GetBestPipeline().PerformanceSummary.MetricValue > 0.8);
}
public void TestLearn()
{
using (var env = new LocalEnvironment()
.AddStandardComponents()) // AutoInference.InferPipelines uses ComponentCatalog to read text data
{
string pathData = GetDataPath("adult.train");
string pathDataTest = GetDataPath("adult.test");
int numOfSampleRows = 1000;
int batchSize = 5;
int numIterations = 10;
int numTransformLevels = 3;
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.Auc);
// Using the simple, uniform random sampling (with replacement) engine
PipelineOptimizerBase autoMlEngine = new UniformRandomEngine(env);
// Test initial learning
var amls = AutoInference.InferPipelines(env, autoMlEngine, pathData, "", out var schema, numTransformLevels, batchSize,
metric, out var bestPipeline, numOfSampleRows, new IterationTerminator(numIterations / 2), MacroUtils.TrainerKinds.SignatureBinaryClassifierTrainer);
env.Check(amls.GetAllEvaluatedPipelines().Length == numIterations / 2);
// Resume learning
amls.UpdateTerminator(new IterationTerminator(numIterations));
bestPipeline = amls.InferPipelines(numTransformLevels, batchSize, numOfSampleRows);
env.Check(amls.GetAllEvaluatedPipelines().Length == numIterations);
// Use best pipeline for another task
var inputFileTrain = new SimpleFileHandle(env, pathData, false, false);
#pragma warning disable 0618
var datasetTrain = ImportTextData.ImportText(env,
new ImportTextData.Input {
InputFile = inputFileTrain, CustomSchema = schema
}).Data;
var inputFileTest = new SimpleFileHandle(env, pathDataTest, false, false);
var datasetTest = ImportTextData.ImportText(env,
new ImportTextData.Input {
InputFile = inputFileTest, CustomSchema = schema
}).Data;
#pragma warning restore 0618
// REVIEW: Theoretically, it could be the case that a new, very bad learner is introduced and
// we get unlucky and only select it every time, such that this test fails. Not
// likely at all, but a non-zero probability. Should be ok, since all current learners are returning d > .80.
bestPipeline.RunTrainTestExperiment(datasetTrain, datasetTest, metric, MacroUtils.TrainerKinds.SignatureBinaryClassifierTrainer,
out var testMetricValue, out var trainMtericValue);
env.Check(testMetricValue > 0.2);
}
Done();
}
public void TestHyperparameterFreezing()
{
string pathData = GetDataPath("adult.train");
int numOfSampleRows = 1000;
int batchSize = 1;
int numIterations = 10;
int numTransformLevels = 3;
using (var env = new LocalEnvironment()
.AddStandardComponents()) // AutoInference uses ComponentCatalog to find all learners
{
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.Auc);
// Using the simple, uniform random sampling (with replacement) brain
PipelineOptimizerBase autoMlBrain = new UniformRandomEngine(env);
// Run initial experiments
var amls = AutoInference.InferPipelines(env, autoMlBrain, pathData, "", out var _, numTransformLevels, batchSize,
metric, out var bestPipeline, numOfSampleRows, new IterationTerminator(numIterations),
MacroUtils.TrainerKinds.SignatureBinaryClassifierTrainer);
// Clear results
amls.ClearEvaluatedPipelines();
// Get space, remove transforms and all but one learner, freeze hyperparameters on learner.
var space = amls.GetSearchSpace();
var transforms = space.Item1.Where(t =>
t.ExpertType != typeof(TransformInference.Experts.Categorical)).ToArray();
var learners = new[] { space.Item2.First() };
var hyperParam = learners[0].PipelineNode.SweepParams.First();
var frozenParamValue = hyperParam.RawValue;
hyperParam.Frozen = true;
amls.UpdateSearchSpace(learners, transforms);
// Allow for one more iteration
amls.UpdateTerminator(new IterationTerminator(numIterations + 1));
// Do learning. Only retained learner should be left in all pipelines.
bestPipeline = amls.InferPipelines(numTransformLevels, batchSize, numOfSampleRows);
// Make sure all pipelines have retained learner
Assert.True(amls.GetAllEvaluatedPipelines().All(p => p.Learner.LearnerName == learners[0].LearnerName));
// Make sure hyperparameter value did not change
Assert.NotNull(bestPipeline);
Assert.Equal(bestPipeline.Learner.PipelineNode.SweepParams.First().RawValue, frozenParamValue);
}
}
public void TestTextDatasetLearn()
{
var env = new MLContext().AddStandardComponents(); // AutoInference uses ComponentCatalog to find all learners
string pathData = GetDataPath(@"../UnitTest/tweets_labeled_10k_test_validation.tsv");
int batchSize = 5;
int numIterations = 35;
int numTransformLevels = 1;
int numSampleRows = 100;
SupportedMetric metric = PipelineSweeperSupportedMetrics.GetSupportedMetric(PipelineSweeperSupportedMetrics.Metrics.AccuracyMicro);
// Using the simple, uniform random sampling (with replacement) engine
PipelineOptimizerBase autoMlEngine = new UniformRandomEngine(env);
// Test initial learning
var amls = AutoInference.InferPipelines(env, autoMlEngine, pathData, "", out var _, numTransformLevels, batchSize,
metric, out var _, numSampleRows, new IterationTerminator(numIterations),
MacroUtils.TrainerKinds.SignatureMultiClassClassifierTrainer);
env.Check(amls.GetAllEvaluatedPipelines().Length == numIterations);
Done();
}
