public void testNonDataDuplicate()
{
MuCell.Model.SBML.Model model = new MuCell.Model.SBML.Model();
MuCell.Model.SBML.Species species1 = new MuCell.Model.SBML.Species();
MuCell.Model.SBML.Species species2 = new MuCell.Model.SBML.Species();
MuCell.Model.SBML.Species species3 = new MuCell.Model.SBML.Species();
model.listOfSpecies = new List<MuCell.Model.SBML.Species>();
model.listOfSpecies.Add(species1);
model.listOfSpecies.Add(species2);
model.listOfSpecies.Add(species3);
// Set some values for species1
species1.ID = "species1";
species1.InitialAmount = 4.0d;
species1.InitialConcentration = 7.0d;
species1.xPosition = 2.0f;
// Set some values for species2 that has the same id and same values
species2.ID = "species1";
species2.InitialAmount = 4.0d;
species2.InitialConcentration = 7.0d;
species2.xPosition = 2.0f;
// Set some values for species3 that has the same id but DIFFERENT values
species3.ID = "species1";
// Difference
species3.InitialAmount = 5.0d;
species3.InitialConcentration = 7.0d;
species3.xPosition = 2.0f;
// Add to the model
model.AddId(species1.ID, species1);
model.AddId(species2.ID, species2);
model.AddId(species3.ID, species3);
try
{
model.processDuplicates();
}
catch (MuCell.Model.SBML.DuplicateSBMLObjectIdException e)
{
// Assert that an exception has been thrown
Assert.IsTrue(true);
}
}
public void testDataDuplicate()
{
MuCell.Model.SBML.Model model = new MuCell.Model.SBML.Model();
MuCell.Model.SBML.Species species1 = new MuCell.Model.SBML.Species();
MuCell.Model.SBML.Species species2 = new MuCell.Model.SBML.Species();
model.listOfSpecies = new List<MuCell.Model.SBML.Species>();
model.listOfSpecies.Add(species1);
model.listOfSpecies.Add(species2);
// Set some values for species1
species1.ID = "species1";
species1.InitialAmount = 4.0d;
species1.InitialConcentration = 7.0d;
species1.xPosition = 2.0f;
// Set some values for species2 that has the same id and same values
species2.ID = "species1";
species2.InitialAmount = 4.0d;
species2.InitialConcentration = 7.0d;
species2.xPosition = 2.0f;
// Add to the model
model.AddId(species1.ID, species1);
model.AddId(species2.ID, species2);
// Check that we have two species
Assert.AreEqual(2, model.listOfSpecies.Count);
// Should remove species2
model.processDuplicates();
// Check there is now only 1 species in the model
Assert.AreEqual(1, model.listOfSpecies.Count);
// Check that it is species1
Assert.AreEqual(species1, model.listOfSpecies.ToArray()[0]);
}