public static MotifJSONView ToJSON(MotifGraph graph)
{
int edgeCount = 0;
MotifJSONView JSONView = new MotifJSONView();
JSONView.edgesJSON = new List<object>(graph.Edges.Count);
foreach (MotifEdge edge in graph.Edges)
{
if (edge.SourceNodeKey == null || edge.TargetNodeKey == null)
continue;
MotifNode SourceNode = graph.Nodes[edge.SourceNodeKey];
MotifNode TargetNode = graph.Nodes[edge.TargetNodeKey];
string KeyString = SourceNode.Key.ToString() + "-" + TargetNode.Key.ToString() + "," + edge.SynapseType;
JSONView.edgesJSON.Add(new
{
id = edgeCount,
node1 = SourceNode.Key.ToString(),
node2 = TargetNode.Key.ToString(),
label = KeyString,
type = edge.SynapseType
});
edgeCount++;
}
return JSONView;
}
public void TestMethod1()
{
AnnotationUtils.MotifGraph graph = new MotifGraph();
graph.BuildGraph(this.Endpoint, this.userCredentials);
System.Diagnostics.Debug.Assert(graph != null);
MotifDOTView dotGraph = AnnotationUtils.MotifDOTView.ToDOT(graph);
string[] Types = new string[] {"svg"};
MotifDOTView.Convert("dot", "C:\\Temp\\Motif.dot", Types);
}
public void GenerateMotifGraph()
{
AnnotationUtils.MotifGraph graph = new MotifGraph();
graph = MotifGraph.BuildGraph(this.Endpoint, this.userCredentials);
System.Diagnostics.Debug.Assert(graph != null);
MotifDOTView dotGraph = AnnotationUtils.MotifDOTView.ToDOT(graph);
string DotFileFullPath = "C:\\Temp\\Motif.dot";
dotGraph.SaveDOT(DotFileFullPath);
string[] Types = new string[] {"svg"};
MotifDOTView.Convert("dot", DotFileFullPath, Types);
}
